Experiment: MBOA 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3949 and Psyr_3950 are separated by 60 nucleotides Psyr_3950 and Psyr_3951 overlap by 8 nucleotides Psyr_3951 and Psyr_3952 overlap by 4 nucleotides Psyr_3952 and Psyr_3953 are separated by 114 nucleotides
Psyr_3949: Psyr_3949 - DNA replication and repair protein RecO, at 4,697,047 to 4,697,730
_3949
Psyr_3950: Psyr_3950 - Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era, at 4,697,791 to 4,698,693
_3950
Psyr_3951: Psyr_3951 - RNAse III, at 4,698,686 to 4,699,375
_3951
Psyr_3952: Psyr_3952 - conserved hypothetical protein, at 4,699,372 to 4,699,749
_3952
Psyr_3953: Psyr_3953 - signal peptidase I, Serine peptidase, MEROPS family S26A, at 4,699,864 to 4,700,718
_3953
Position (kb)
4698
4699
4700 Strain fitness (log2 ratio)
-1
0
1
2 at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.702 kb on + strand at 4697.703 kb on - strand at 4697.703 kb on - strand at 4697.703 kb on - strand at 4697.703 kb on - strand at 4697.703 kb on - strand at 4697.703 kb on - strand at 4697.793 kb on - strand at 4697.793 kb on - strand at 4698.792 kb on - strand, within Psyr_3951 at 4699.452 kb on - strand, within Psyr_3952 at 4699.514 kb on - strand, within Psyr_3952 at 4699.554 kb on - strand, within Psyr_3952 at 4699.635 kb on - strand, within Psyr_3952 at 4699.635 kb on - strand, within Psyr_3952 at 4699.644 kb on - strand, within Psyr_3952 at 4699.738 kb on - strand at 4699.738 kb on - strand at 4699.738 kb on - strand at 4699.738 kb on - strand at 4699.738 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 0.5 mM remove 4,697,702 + -0.3 4,697,702 + -0.4 4,697,702 + -1.2 4,697,702 + -0.9 4,697,702 + -1.4 4,697,702 + -1.2 4,697,702 + +0.3 4,697,702 + -0.3 4,697,702 + -0.3 4,697,702 + +0.6 4,697,702 + +1.7 4,697,703 - +1.2 4,697,703 - +1.3 4,697,703 - -0.5 4,697,703 - -0.6 4,697,703 - -0.4 4,697,703 - -0.7 4,697,793 - +0.2 4,697,793 - -0.2 4,698,792 - Psyr_3951 0.15 -0.2 4,699,452 - Psyr_3952 0.21 +0.4 4,699,514 - Psyr_3952 0.38 -0.6 4,699,554 - Psyr_3952 0.48 +0.4 4,699,635 - Psyr_3952 0.70 +1.7 4,699,635 - Psyr_3952 0.70 +1.0 4,699,644 - Psyr_3952 0.72 +0.4 4,699,738 - +0.3 4,699,738 - +1.4 4,699,738 - +0.4 4,699,738 - +2.1 4,699,738 - +0.0
Or see this region's nucleotide sequence