Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3724

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
4,431,526	+				-0.6
4,431,527	-				+0.7
4,431,527	-				-0.3
4,431,548	+				-0.3
4,431,640	+				+0.1
4,431,640	+				-1.1
4,431,641	-				-1.3
4,431,651	+				-0.5
4,431,651	+				+0.2
4,431,651	+				+1.5
4,431,652	-				-0.1
4,431,652	-				-0.6
4,431,753	-				-1.1
4,431,766	-				+0.9
4,431,785	+				-0.2
4,431,785	+				+0.3
4,431,871	+				-0.1
4,431,871	+				-1.6
4,431,871	+				-0.2
4,431,871	+				-0.8
4,431,871	+				+0.6
4,431,871	+				-0.2
4,431,871	+				-0.8
4,431,872	-				-1.0
4,431,872	-				+0.2
4,431,873	+				-0.3
4,431,873	+				-0.9
4,431,873	+				+0.4
4,431,873	+				+2.5
4,431,874	-				+2.1
4,431,874	-				+0.0
4,431,874	-				-0.6
4,431,874	-				-1.3
4,431,874	-				+0.7
4,431,874	-				-1.2
4,431,880	-				-0.3
4,431,880	-				-0.7
4,432,022	+				-0.5
4,432,022	+				+0.6
4,432,023	-				+0.7
4,432,046	+				-0.4
4,432,046	+				-1.3
4,432,046	+				-0.2
4,432,047	-				+0.3
4,432,047	-				-0.8
4,432,110	-		Psyr_3723	0.14	-0.3
4,432,137	+		Psyr_3723	0.26	-0.4
4,432,138	-		Psyr_3723	0.26	-1.1
4,432,169	+		Psyr_3723	0.39	-0.6
4,432,169	+		Psyr_3723	0.39	-0.7
4,432,169	+		Psyr_3723	0.39	-0.8
4,432,308	-				+0.5
4,432,314	+				+0.2
4,432,315	-				-0.1
4,432,318	-				+0.2
4,432,318	-				-0.2
4,432,360	-				-0.3
4,432,360	-				+0.2
4,432,447	+				+0.2
4,432,475	+				+2.5
4,432,476	-				+0.6
4,432,504	+				-2.2
4,432,504	+				+0.7
4,432,504	+				-1.1
4,432,505	-				-0.2
4,432,505	-				+0.5
4,432,522	+				+1.9
4,432,526	-				+0.2
4,432,679	-		Psyr_3724	0.12	+0.1
4,432,679	-		Psyr_3724	0.12	+0.8
4,432,679	-		Psyr_3724	0.12	-0.1
4,432,679	-		Psyr_3724	0.12	-0.3
4,432,679	-		Psyr_3724	0.12	-1.2
4,432,679	-		Psyr_3724	0.12	+0.7
4,432,679	-		Psyr_3724	0.12	-0.7
4,432,679	-		Psyr_3724	0.12	+0.6
4,432,772	+		Psyr_3724	0.20	-0.7
4,432,802	+		Psyr_3724	0.22	-0.8
4,432,802	+		Psyr_3724	0.22	+0.5
4,432,821	+		Psyr_3724	0.24	-0.7
4,432,858	+		Psyr_3724	0.27	+0.5
4,432,859	-		Psyr_3724	0.27	-1.2
4,432,859	-		Psyr_3724	0.27	+0.6
4,432,881	+		Psyr_3724	0.28	-0.4
4,432,887	-		Psyr_3724	0.29	-0.8
4,432,927	+		Psyr_3724	0.32	-0.5
4,432,928	-		Psyr_3724	0.32	-0.2
4,432,959	+		Psyr_3724	0.35	-1.0
4,432,959	+		Psyr_3724	0.35	-1.5
4,432,959	+		Psyr_3724	0.35	+1.1
4,432,960	-		Psyr_3724	0.35	-1.8
4,432,960	-		Psyr_3724	0.35	+0.8
4,432,960	-		Psyr_3724	0.35	-0.0
4,433,153	+		Psyr_3724	0.50	+0.9
4,433,154	-		Psyr_3724	0.50	-0.6
4,433,154	-		Psyr_3724	0.50	+0.5
4,433,175	-		Psyr_3724	0.52	+0.9
4,433,187	+		Psyr_3724	0.53	-0.7
4,433,188	-		Psyr_3724	0.53	+0.2
4,433,232	+		Psyr_3724	0.56	-0.2
4,433,233	-		Psyr_3724	0.56	-0.7
4,433,233	-		Psyr_3724	0.56	-1.5
4,433,314	+		Psyr_3724	0.63	+0.6
4,433,314	+		Psyr_3724	0.63	-0.1
4,433,315	-		Psyr_3724	0.63	+0.8
4,433,315	-		Psyr_3724	0.63	-0.3
4,433,337	+		Psyr_3724	0.65	+0.2
4,433,337	+		Psyr_3724	0.65	+0.9
4,433,337	+		Psyr_3724	0.65	+0.0
4,433,338	-		Psyr_3724	0.65	+0.3
4,433,338	-		Psyr_3724	0.65	+0.1
4,433,338	-		Psyr_3724	0.65	-1.6
4,433,338	-		Psyr_3724	0.65	+0.7
4,433,341	+		Psyr_3724	0.65	-0.1
4,433,433	+		Psyr_3724	0.72	+0.2
4,433,463	+		Psyr_3724	0.75	+3.1
4,433,463	+		Psyr_3724	0.75	-0.2
4,433,464	-		Psyr_3724	0.75	+1.1
4,433,464	-		Psyr_3724	0.75	+0.7
4,433,464	-		Psyr_3724	0.75	+0.3
4,433,464	-		Psyr_3724	0.75	+0.7
4,433,470	-		Psyr_3724	0.75	-1.2
4,433,590	+		Psyr_3724	0.85	-0.8
4,433,590	+		Psyr_3724	0.85	-0.4
4,433,590	+		Psyr_3724	0.85	-0.8
4,433,590	+		Psyr_3724	0.85	-0.2
4,433,590	+		Psyr_3724	0.85	-0.3
4,433,590	+		Psyr_3724	0.85	+0.2
4,433,590	+		Psyr_3724	0.85	+0.4
4,433,590	+		Psyr_3724	0.85	-0.2
4,433,590	+		Psyr_3724	0.85	+0.1
4,433,590	+		Psyr_3724	0.85	-0.5
4,433,590	+		Psyr_3724	0.85	+0.2
4,433,590	+		Psyr_3724	0.85	+0.2
4,433,591	-		Psyr_3724	0.85	-0.6
4,433,591	-		Psyr_3724	0.85	+1.1
4,433,591	-		Psyr_3724	0.85	-1.6
4,433,591	-		Psyr_3724	0.85	-2.0
4,433,591	-		Psyr_3724	0.85	-0.6
4,433,591	-		Psyr_3724	0.85	-0.4
4,433,591	-		Psyr_3724	0.85	-0.9
4,433,603	+		Psyr_3724	0.86	-0.8
4,433,603	+		Psyr_3724	0.86	-0.5
4,433,603	+		Psyr_3724	0.86	+0.0
4,433,604	-		Psyr_3724	0.86	-0.6
4,433,752	+				+0.7
4,433,752	+				-1.9
4,433,753	-				+0.1
4,433,753	-				-0.3
4,433,753	-				+0.1
4,433,812	+				-0.2
4,433,813	-				-0.5
4,433,857	+				+0.1
4,433,857	+				-0.1
4,433,857	+				+0.8
4,433,857	+				+0.4
4,433,857	+				+0.1
4,433,857	+				-0.2
4,433,857	+				+1.3
4,433,857	+				-0.9
4,433,858	-				-0.4
4,433,858	-				+0.1
4,433,858	-				-0.2
4,433,858	-				-1.5
4,433,858	-				-0.9
4,433,860	+				+0.1
4,433,860	+				-2.2
4,433,860	+				+1.5
4,433,860	+				-0.3
4,433,861	-				+0.8
4,433,861	-				+0.7
4,433,861	-				+0.1
4,433,861	-				+0.8
4,433,861	-				+0.2
4,433,861	-				+1.8
4,433,861	-				-0.1
4,433,861	-				+0.4
4,433,864	+				+1.5
4,433,864	+				-1.3
4,433,864	+				+0.4
4,433,865	-				+0.1
4,433,865	-				-0.7
4,433,865	-				-0.3
4,433,865	-				-0.8
4,433,941	+		Psyr_3725	0.11	-1.3
4,433,942	-		Psyr_3725	0.11	-0.4
4,433,963	+		Psyr_3725	0.12	+0.0
4,433,963	+		Psyr_3725	0.12	+0.7
4,433,963	+		Psyr_3725	0.12	-1.6
4,433,963	+		Psyr_3725	0.12	-0.9
4,433,963	+		Psyr_3725	0.12	-0.1
4,433,963	+		Psyr_3725	0.12	+0.1
4,433,963	+		Psyr_3725	0.12	+0.3
4,433,963	+		Psyr_3725	0.12	-1.6
4,433,963	+		Psyr_3725	0.12	-0.4
4,433,963	+		Psyr_3725	0.12	-0.6
4,433,963	+		Psyr_3725	0.12	-0.9
4,433,964	-		Psyr_3725	0.12	+0.7
4,433,964	-		Psyr_3725	0.12	-0.3
4,433,964	-		Psyr_3725	0.12	-0.3
4,433,964	-		Psyr_3725	0.12	-0.2
4,433,970	-		Psyr_3725	0.12	-2.0
4,433,970	-		Psyr_3725	0.12	+1.2
4,433,970	-		Psyr_3725	0.12	-0.4
4,434,042	+		Psyr_3725	0.17	-1.7
4,434,042	+		Psyr_3725	0.17	-0.6
4,434,042	+		Psyr_3725	0.17	-0.6
4,434,042	+		Psyr_3725	0.17	-0.3
4,434,042	+		Psyr_3725	0.17	-1.3
4,434,160	+		Psyr_3725	0.25	+0.1
4,434,225	+		Psyr_3725	0.29	-0.2
4,434,225	+		Psyr_3725	0.29	-0.5
4,434,236	+		Psyr_3725	0.30	+0.4
4,434,237	-		Psyr_3725	0.30	+0.4
4,434,304	+		Psyr_3725	0.34	+0.5
4,434,305	-		Psyr_3725	0.34	+0.2
4,434,305	-		Psyr_3725	0.34	+0.8
4,434,309	+		Psyr_3725	0.34	-0.3
4,434,309	+		Psyr_3725	0.34	-0.3
4,434,310	-		Psyr_3725	0.34	+0.4
4,434,350	+		Psyr_3725	0.37	+0.6
4,434,352	+		Psyr_3725	0.37	-0.7
4,434,353	-		Psyr_3725	0.37	+0.7
4,434,353	-		Psyr_3725	0.37	-0.1
4,434,353	-		Psyr_3725	0.37	+0.3
4,434,404	+		Psyr_3725	0.40	-0.1
4,434,404	+		Psyr_3725	0.40	-0.2
4,434,404	+		Psyr_3725	0.40	-0.4
4,434,405	-		Psyr_3725	0.40	-2.4
4,434,405	-		Psyr_3725	0.40	-0.1
4,434,405	-		Psyr_3725	0.40	+0.3
4,434,405	-		Psyr_3725	0.40	+0.1
4,434,405	-		Psyr_3725	0.40	-0.5
4,434,405	-		Psyr_3725	0.40	+1.0
4,434,469	+		Psyr_3725	0.45	-0.9
4,434,555	+		Psyr_3725	0.50	-0.3
4,434,565	+		Psyr_3725	0.51	-0.6
4,434,764	-		Psyr_3725	0.64	+0.7