Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_5066 and Psyr_5067 are separated by 130 nucleotides Psyr_5067 and Psyr_5068 are separated by 35 nucleotides
Psyr_5066: Psyr_5066 - import inner membrane translocase, subunit Tim44, at 6,010,980 to 6,011,825
_5066
Psyr_5067: Psyr_5067 - conserved hypothetical protein, at 6,011,956 to 6,012,363
_5067
Psyr_5068: Psyr_5068 - transporter, CPA2 family, at 6,012,399 to 6,014,162
_5068
Position (kb)
6011
6012
6013 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6010.974 kb on - strand at 6010.979 kb on + strand at 6010.980 kb on - strand at 6010.993 kb on + strand at 6010.993 kb on + strand at 6010.993 kb on + strand at 6010.994 kb on - strand at 6011.891 kb on - strand at 6011.894 kb on + strand at 6011.894 kb on + strand at 6011.894 kb on + strand at 6011.894 kb on + strand at 6011.894 kb on + strand at 6011.895 kb on - strand at 6011.917 kb on - strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.921 kb on + strand at 6011.922 kb on - strand at 6011.922 kb on - strand at 6011.922 kb on - strand at 6012.115 kb on + strand, within Psyr_5067 at 6012.115 kb on + strand, within Psyr_5067 at 6012.116 kb on - strand, within Psyr_5067 at 6012.116 kb on - strand, within Psyr_5067 at 6012.116 kb on - strand, within Psyr_5067 at 6012.116 kb on - strand, within Psyr_5067 at 6012.116 kb on - strand, within Psyr_5067 at 6012.163 kb on + strand, within Psyr_5067 at 6012.163 kb on + strand, within Psyr_5067 at 6012.245 kb on - strand, within Psyr_5067 at 6012.247 kb on + strand, within Psyr_5067 at 6012.247 kb on + strand, within Psyr_5067 at 6012.248 kb on - strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.272 kb on + strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.273 kb on - strand, within Psyr_5067 at 6012.461 kb on + strand at 6012.461 kb on + strand at 6012.461 kb on + strand at 6012.461 kb on + strand at 6012.461 kb on + strand at 6012.462 kb on - strand at 6012.462 kb on - strand at 6012.585 kb on + strand, within Psyr_5068 at 6012.585 kb on + strand, within Psyr_5068 at 6012.585 kb on + strand, within Psyr_5068 at 6012.626 kb on + strand, within Psyr_5068 at 6012.627 kb on - strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.805 kb on + strand, within Psyr_5068 at 6012.806 kb on - strand, within Psyr_5068 at 6012.806 kb on - strand, within Psyr_5068 at 6012.829 kb on + strand, within Psyr_5068 at 6012.830 kb on - strand, within Psyr_5068 at 6012.959 kb on - strand, within Psyr_5068 at 6013.187 kb on + strand, within Psyr_5068 at 6013.188 kb on - strand, within Psyr_5068 at 6013.282 kb on + strand, within Psyr_5068 at 6013.282 kb on + strand, within Psyr_5068
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 6,010,974 - -1.0 6,010,979 + -0.8 6,010,980 - -0.3 6,010,993 + -0.3 6,010,993 + -1.8 6,010,993 + -0.9 6,010,994 - +0.7 6,011,891 - -0.1 6,011,894 + -0.1 6,011,894 + +1.0 6,011,894 + +0.4 6,011,894 + -0.2 6,011,894 + +0.6 6,011,895 - +1.6 6,011,917 - +2.7 6,011,921 + +0.3 6,011,921 + -1.3 6,011,921 + -0.5 6,011,921 + +0.5 6,011,921 + +0.1 6,011,921 + -0.2 6,011,921 + -1.2 6,011,921 + -0.0 6,011,922 - -1.4 6,011,922 - -0.8 6,011,922 - -1.2 6,012,115 + Psyr_5067 0.39 -0.4 6,012,115 + Psyr_5067 0.39 +1.2 6,012,116 - Psyr_5067 0.39 -0.6 6,012,116 - Psyr_5067 0.39 +0.2 6,012,116 - Psyr_5067 0.39 +1.2 6,012,116 - Psyr_5067 0.39 +1.2 6,012,116 - Psyr_5067 0.39 -0.4 6,012,163 + Psyr_5067 0.51 +0.2 6,012,163 + Psyr_5067 0.51 -1.2 6,012,245 - Psyr_5067 0.71 -0.4 6,012,247 + Psyr_5067 0.71 -0.4 6,012,247 + Psyr_5067 0.71 +3.5 6,012,248 - Psyr_5067 0.72 -1.6 6,012,272 + Psyr_5067 0.77 +0.2 6,012,272 + Psyr_5067 0.77 +1.2 6,012,272 + Psyr_5067 0.77 +0.2 6,012,272 + Psyr_5067 0.77 +1.2 6,012,272 + Psyr_5067 0.77 +1.2 6,012,272 + Psyr_5067 0.77 +0.2 6,012,272 + Psyr_5067 0.77 +0.2 6,012,273 - Psyr_5067 0.78 +1.2 6,012,273 - Psyr_5067 0.78 +0.2 6,012,273 - Psyr_5067 0.78 +0.2 6,012,273 - Psyr_5067 0.78 -1.0 6,012,273 - Psyr_5067 0.78 -1.4 6,012,273 - Psyr_5067 0.78 +3.2 6,012,273 - Psyr_5067 0.78 +2.2 6,012,461 + -0.8 6,012,461 + -0.6 6,012,461 + -0.7 6,012,461 + -1.4 6,012,461 + -0.4 6,012,462 - -0.8 6,012,462 - -1.9 6,012,585 + Psyr_5068 0.11 -1.0 6,012,585 + Psyr_5068 0.11 -0.6 6,012,585 + Psyr_5068 0.11 -0.8 6,012,626 + Psyr_5068 0.13 +0.6 6,012,627 - Psyr_5068 0.13 -0.4 6,012,805 + Psyr_5068 0.23 -1.6 6,012,805 + Psyr_5068 0.23 +0.1 6,012,805 + Psyr_5068 0.23 -0.3 6,012,805 + Psyr_5068 0.23 -0.3 6,012,805 + Psyr_5068 0.23 +0.1 6,012,805 + Psyr_5068 0.23 -0.4 6,012,805 + Psyr_5068 0.23 +1.4 6,012,806 - Psyr_5068 0.23 +0.0 6,012,806 - Psyr_5068 0.23 +0.2 6,012,829 + Psyr_5068 0.24 +0.3 6,012,830 - Psyr_5068 0.24 -0.8 6,012,959 - Psyr_5068 0.32 +0.5 6,013,187 + Psyr_5068 0.45 +0.9 6,013,188 - Psyr_5068 0.45 -0.2 6,013,282 + Psyr_5068 0.50 -0.1 6,013,282 + Psyr_5068 0.50 +0.2
Or see this region's nucleotide sequence