Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4464 and Psyr_4465 overlap by 4 nucleotides Psyr_4465 and Psyr_4466 are separated by 269 nucleotides Psyr_4466 and Psyr_4467 are separated by 54 nucleotides Psyr_4467 and Psyr_4468 are separated by 61 nucleotides
Psyr_4464: Psyr_4464 - lipoprotein, putative, at 5,326,551 to 5,327,000
_4464
Psyr_4465: Psyr_4465 - conserved domain protein, at 5,326,997 to 5,327,650
_4465
Psyr_4466: Psyr_4466 - Thioredoxin, at 5,327,920 to 5,328,792
_4466
Psyr_4467: Psyr_4467 - conserved hypothetical protein, at 5,328,847 to 5,329,200
_4467
Psyr_4468: Psyr_4468 - conserved hypothetical protein, at 5,329,262 to 5,329,684
_4468
Position (kb)
5327
5328
5329 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5327.169 kb on - strand, within Psyr_4465 at 5327.393 kb on + strand, within Psyr_4465 at 5327.659 kb on + strand at 5327.659 kb on + strand at 5327.659 kb on + strand at 5327.659 kb on + strand at 5327.660 kb on - strand at 5327.660 kb on - strand at 5327.660 kb on - strand at 5327.660 kb on - strand at 5327.660 kb on - strand at 5327.682 kb on - strand at 5327.694 kb on + strand at 5327.695 kb on - strand at 5327.817 kb on + strand at 5327.817 kb on + strand at 5327.818 kb on - strand at 5327.818 kb on - strand at 5327.848 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.886 kb on + strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.887 kb on - strand at 5327.938 kb on + strand at 5327.938 kb on + strand at 5327.938 kb on + strand at 5327.938 kb on + strand at 5327.939 kb on - strand at 5327.939 kb on - strand at 5327.939 kb on - strand at 5328.082 kb on + strand, within Psyr_4466 at 5328.082 kb on + strand, within Psyr_4466 at 5328.083 kb on - strand, within Psyr_4466 at 5328.398 kb on - strand, within Psyr_4466 at 5328.631 kb on + strand, within Psyr_4466 at 5328.631 kb on + strand, within Psyr_4466 at 5328.683 kb on - strand, within Psyr_4466 at 5328.719 kb on + strand at 5328.720 kb on - strand at 5328.787 kb on + strand at 5328.787 kb on + strand at 5328.787 kb on + strand at 5328.787 kb on + strand at 5328.787 kb on + strand at 5328.787 kb on + strand at 5328.790 kb on + strand at 5328.790 kb on + strand at 5328.790 kb on + strand at 5328.790 kb on + strand at 5328.790 kb on + strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.795 kb on + strand at 5328.795 kb on + strand at 5328.795 kb on + strand at 5328.795 kb on + strand at 5328.795 kb on + strand at 5328.796 kb on - strand at 5328.796 kb on - strand at 5328.796 kb on - strand at 5328.796 kb on - strand at 5328.796 kb on - strand at 5328.869 kb on + strand at 5328.870 kb on - strand at 5329.192 kb on - strand at 5329.192 kb on - strand at 5329.227 kb on + strand at 5329.227 kb on + strand at 5329.227 kb on + strand at 5329.227 kb on + strand at 5329.227 kb on + strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.228 kb on - strand at 5329.485 kb on + strand, within Psyr_4468 at 5329.485 kb on + strand, within Psyr_4468 at 5329.485 kb on + strand, within Psyr_4468 at 5329.485 kb on + strand, within Psyr_4468 at 5329.485 kb on + strand, within Psyr_4468 at 5329.486 kb on - strand, within Psyr_4468 at 5329.486 kb on - strand, within Psyr_4468 at 5329.486 kb on - strand, within Psyr_4468 at 5329.486 kb on - strand, within Psyr_4468 at 5329.486 kb on - strand, within Psyr_4468 at 5329.633 kb on + strand, within Psyr_4468 at 5329.633 kb on + strand, within Psyr_4468 at 5329.634 kb on - strand, within Psyr_4468 at 5329.639 kb on + strand, within Psyr_4468 at 5329.639 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.641 kb on + strand, within Psyr_4468 at 5329.642 kb on - strand at 5329.642 kb on - strand at 5329.642 kb on - strand at 5329.642 kb on - strand at 5329.642 kb on - strand at 5329.688 kb on + strand at 5329.688 kb on + strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 5,327,169 - Psyr_4465 0.26 -0.3 5,327,393 + Psyr_4465 0.61 -0.4 5,327,659 + -0.1 5,327,659 + +1.1 5,327,659 + -0.3 5,327,659 + -0.0 5,327,660 - -0.6 5,327,660 - -0.1 5,327,660 - +0.1 5,327,660 - -0.4 5,327,660 - -0.7 5,327,682 - -0.8 5,327,694 + -0.6 5,327,695 - +1.5 5,327,817 + +0.3 5,327,817 + +0.6 5,327,818 - +0.3 5,327,818 - +0.8 5,327,848 + -2.1 5,327,886 + +2.0 5,327,886 + -1.3 5,327,886 + +0.5 5,327,886 + -0.0 5,327,886 + +0.9 5,327,886 + -0.4 5,327,886 + -1.7 5,327,887 - +0.3 5,327,887 - +0.6 5,327,887 - +0.3 5,327,887 - +0.6 5,327,887 - -0.4 5,327,887 - +0.1 5,327,887 - -0.4 5,327,938 + -0.1 5,327,938 + -0.2 5,327,938 + +0.7 5,327,938 + +1.3 5,327,939 - +0.4 5,327,939 - -0.4 5,327,939 - +0.1 5,328,082 + Psyr_4466 0.19 -0.6 5,328,082 + Psyr_4466 0.19 -0.1 5,328,083 - Psyr_4466 0.19 -0.3 5,328,398 - Psyr_4466 0.55 -1.0 5,328,631 + Psyr_4466 0.81 +0.0 5,328,631 + Psyr_4466 0.81 -0.5 5,328,683 - Psyr_4466 0.87 -0.5 5,328,719 + +0.0 5,328,720 - +0.1 5,328,787 + -0.3 5,328,787 + -0.4 5,328,787 + -0.9 5,328,787 + +0.6 5,328,787 + -0.3 5,328,787 + -1.7 5,328,790 + +1.0 5,328,790 + -0.2 5,328,790 + +1.1 5,328,790 + -2.8 5,328,790 + +0.2 5,328,791 - -1.0 5,328,791 - +0.7 5,328,791 - +0.2 5,328,791 - +0.6 5,328,791 - +0.3 5,328,791 - -0.7 5,328,795 + -0.7 5,328,795 + +0.2 5,328,795 + +0.3 5,328,795 + -0.9 5,328,795 + +0.3 5,328,796 - +0.5 5,328,796 - -0.1 5,328,796 - +0.0 5,328,796 - -1.2 5,328,796 - +0.6 5,328,869 + +0.1 5,328,870 - +0.3 5,329,192 - +0.0 5,329,192 - +0.9 5,329,227 + +0.6 5,329,227 + -0.2 5,329,227 + +0.9 5,329,227 + +0.2 5,329,227 + +0.1 5,329,228 - -0.1 5,329,228 - -1.3 5,329,228 - +0.6 5,329,228 - +0.0 5,329,228 - +0.3 5,329,228 - -0.9 5,329,228 - -1.2 5,329,228 - +0.4 5,329,228 - -0.4 5,329,228 - +0.6 5,329,228 - +0.6 5,329,228 - +0.9 5,329,228 - -2.0 5,329,228 - -1.1 5,329,228 - +0.4 5,329,485 + Psyr_4468 0.53 -2.9 5,329,485 + Psyr_4468 0.53 +0.0 5,329,485 + Psyr_4468 0.53 +0.4 5,329,485 + Psyr_4468 0.53 +0.1 5,329,485 + Psyr_4468 0.53 -0.4 5,329,486 - Psyr_4468 0.53 +0.1 5,329,486 - Psyr_4468 0.53 +0.1 5,329,486 - Psyr_4468 0.53 -0.1 5,329,486 - Psyr_4468 0.53 +0.2 5,329,486 - Psyr_4468 0.53 +0.1 5,329,633 + Psyr_4468 0.88 +0.3 5,329,633 + Psyr_4468 0.88 +0.6 5,329,634 - Psyr_4468 0.88 -0.6 5,329,639 + Psyr_4468 0.89 -0.1 5,329,639 + Psyr_4468 0.89 +0.0 5,329,641 + Psyr_4468 0.90 -0.6 5,329,641 + Psyr_4468 0.90 +1.0 5,329,641 + Psyr_4468 0.90 +0.3 5,329,641 + Psyr_4468 0.90 -0.6 5,329,641 + Psyr_4468 0.90 +0.8 5,329,641 + Psyr_4468 0.90 -0.3 5,329,641 + Psyr_4468 0.90 -0.7 5,329,641 + Psyr_4468 0.90 +0.2 5,329,641 + Psyr_4468 0.90 +0.1 5,329,641 + Psyr_4468 0.90 -1.0 5,329,641 + Psyr_4468 0.90 +0.5 5,329,641 + Psyr_4468 0.90 +0.0 5,329,641 + Psyr_4468 0.90 +0.5 5,329,641 + Psyr_4468 0.90 +0.2 5,329,641 + Psyr_4468 0.90 +0.0 5,329,642 - -0.6 5,329,642 - -1.6 5,329,642 - +0.5 5,329,642 - +2.5 5,329,642 - +0.0 5,329,688 + -0.4 5,329,688 + -0.1 5,329,689 - +0.6 5,329,689 - +1.4 5,329,689 - +0.5 5,329,689 - +0.4 5,329,689 - +0.0 5,329,689 - -0.8
Or see this region's nucleotide sequence