Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4458 and Psyr_4459 overlap by 4 nucleotides Psyr_4459 and Psyr_4460 are separated by 129 nucleotides Psyr_4460 and Psyr_4461 are separated by 21 nucleotides Psyr_4461 and Psyr_4462 are separated by 47 nucleotides
Psyr_4458: Psyr_4458 - Antitermination protein NusB, at 5,321,845 to 5,322,342
_4458
Psyr_4459: Psyr_4459 - 6,7-dimethyl-8-ribityllumazine synthase, at 5,322,339 to 5,322,815
_4459
Psyr_4460: Psyr_4460 - 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II, at 5,322,945 to 5,324,036
_4460
Psyr_4461: Psyr_4461 - Lumazine-binding protein, at 5,324,058 to 5,324,720
_4461
Psyr_4462: Psyr_4462 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase, at 5,324,768 to 5,325,868
_4462
Position (kb)
5322
5323
5324
5325 Strain fitness (log2 ratio)
-2
-1
0
1 at 5322.830 kb on - strand at 5322.830 kb on - strand at 5322.833 kb on - strand at 5322.870 kb on - strand at 5322.870 kb on - strand at 5322.873 kb on - strand at 5322.873 kb on - strand at 5322.873 kb on - strand at 5322.943 kb on - strand at 5322.947 kb on - strand at 5322.962 kb on - strand at 5322.962 kb on - strand at 5322.962 kb on - strand at 5322.962 kb on - strand at 5323.082 kb on - strand, within Psyr_4460 at 5323.082 kb on - strand, within Psyr_4460 at 5323.082 kb on - strand, within Psyr_4460 at 5323.082 kb on - strand, within Psyr_4460 at 5323.086 kb on - strand, within Psyr_4460 at 5323.360 kb on + strand, within Psyr_4460 at 5324.072 kb on - strand at 5324.072 kb on - strand at 5324.770 kb on - strand at 5324.770 kb on - strand at 5324.770 kb on - strand at 5324.771 kb on + strand at 5324.772 kb on - strand at 5324.772 kb on - strand at 5324.772 kb on - strand at 5324.772 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 5,322,830 - +0.2 5,322,830 - +0.4 5,322,833 - -0.6 5,322,870 - -0.7 5,322,870 - +1.4 5,322,873 - +1.0 5,322,873 - -0.4 5,322,873 - -0.9 5,322,943 - -0.6 5,322,947 - +0.2 5,322,962 - +0.1 5,322,962 - +0.1 5,322,962 - -1.3 5,322,962 - +0.1 5,323,082 - Psyr_4460 0.13 +0.7 5,323,082 - Psyr_4460 0.13 -1.7 5,323,082 - Psyr_4460 0.13 -0.4 5,323,082 - Psyr_4460 0.13 +1.6 5,323,086 - Psyr_4460 0.13 -0.4 5,323,360 + Psyr_4460 0.38 -0.4 5,324,072 - +0.5 5,324,072 - -0.0 5,324,770 - -0.3 5,324,770 - -1.8 5,324,770 - +0.1 5,324,771 + +0.6 5,324,772 - -0.2 5,324,772 - -0.1 5,324,772 - -0.5 5,324,772 - -2.7
Or see this region's nucleotide sequence