Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3314 and Psyr_3315 are separated by 83 nucleotides Psyr_3315 and Psyr_3316 are separated by 572 nucleotides
Psyr_3314: Psyr_3314 - conserved hypothetical protein, at 3,966,313 to 3,967,245
_3314
Psyr_3315: Psyr_3315 - conserved hypothetical protein, at 3,967,329 to 3,967,673
_3315
Psyr_3316: Psyr_3316 - ISPsy8, transposase OrfA, at 3,968,246 to 3,968,761
_3316
Position (kb)
3967
3968 Strain fitness (log2 ratio)
-1
0
1
2 at 3966.392 kb on - strand at 3966.443 kb on - strand, within Psyr_3314 at 3966.443 kb on - strand, within Psyr_3314 at 3966.496 kb on + strand, within Psyr_3314 at 3966.496 kb on + strand, within Psyr_3314 at 3966.574 kb on + strand, within Psyr_3314 at 3966.574 kb on + strand, within Psyr_3314 at 3966.694 kb on + strand, within Psyr_3314 at 3966.902 kb on - strand, within Psyr_3314 at 3966.902 kb on - strand, within Psyr_3314 at 3966.902 kb on - strand, within Psyr_3314 at 3966.902 kb on - strand, within Psyr_3314 at 3966.939 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.018 kb on + strand, within Psyr_3314 at 3967.019 kb on - strand, within Psyr_3314 at 3967.019 kb on - strand, within Psyr_3314 at 3967.019 kb on - strand, within Psyr_3314 at 3967.019 kb on - strand, within Psyr_3314 at 3967.019 kb on - strand, within Psyr_3314 at 3967.021 kb on + strand, within Psyr_3314 at 3967.022 kb on - strand at 3967.075 kb on + strand, within Psyr_3314 at 3967.075 kb on + strand, within Psyr_3314 at 3967.105 kb on + strand, within Psyr_3314 at 3967.106 kb on - strand, within Psyr_3314 at 3967.106 kb on - strand, within Psyr_3314 at 3967.106 kb on - strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.111 kb on + strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.112 kb on - strand, within Psyr_3314 at 3967.299 kb on + strand at 3967.356 kb on + strand at 3967.356 kb on + strand at 3967.357 kb on - strand at 3967.403 kb on + strand, within Psyr_3315 at 3967.409 kb on + strand, within Psyr_3315 at 3967.682 kb on + strand at 3967.824 kb on + strand at 3967.875 kb on - strand at 3967.875 kb on - strand at 3967.879 kb on + strand at 3967.879 kb on + strand at 3967.879 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,966,392 - -0.2 3,966,443 - Psyr_3314 0.14 -1.2 3,966,443 - Psyr_3314 0.14 +1.2 3,966,496 + Psyr_3314 0.20 +2.7 3,966,496 + Psyr_3314 0.20 +0.6 3,966,574 + Psyr_3314 0.28 +0.1 3,966,574 + Psyr_3314 0.28 -1.0 3,966,694 + Psyr_3314 0.41 -0.0 3,966,902 - Psyr_3314 0.63 +0.0 3,966,902 - Psyr_3314 0.63 +0.3 3,966,902 - Psyr_3314 0.63 +1.5 3,966,902 - Psyr_3314 0.63 -0.3 3,966,939 + Psyr_3314 0.67 +0.3 3,967,018 + Psyr_3314 0.76 -0.5 3,967,018 + Psyr_3314 0.76 -0.7 3,967,018 + Psyr_3314 0.76 -0.8 3,967,018 + Psyr_3314 0.76 +0.3 3,967,018 + Psyr_3314 0.76 -1.2 3,967,018 + Psyr_3314 0.76 +1.8 3,967,019 - Psyr_3314 0.76 -0.6 3,967,019 - Psyr_3314 0.76 -0.3 3,967,019 - Psyr_3314 0.76 -0.1 3,967,019 - Psyr_3314 0.76 +0.4 3,967,019 - Psyr_3314 0.76 +0.6 3,967,021 + Psyr_3314 0.76 +0.0 3,967,022 - +0.7 3,967,075 + Psyr_3314 0.82 -0.8 3,967,075 + Psyr_3314 0.82 -0.8 3,967,105 + Psyr_3314 0.85 -1.4 3,967,106 - Psyr_3314 0.85 +0.6 3,967,106 - Psyr_3314 0.85 +0.5 3,967,106 - Psyr_3314 0.85 +0.6 3,967,111 + Psyr_3314 0.86 -0.7 3,967,111 + Psyr_3314 0.86 +0.3 3,967,111 + Psyr_3314 0.86 -0.3 3,967,111 + Psyr_3314 0.86 -0.2 3,967,111 + Psyr_3314 0.86 -0.1 3,967,111 + Psyr_3314 0.86 +0.1 3,967,111 + Psyr_3314 0.86 +0.8 3,967,112 - Psyr_3314 0.86 +0.2 3,967,112 - Psyr_3314 0.86 -0.5 3,967,112 - Psyr_3314 0.86 -0.1 3,967,112 - Psyr_3314 0.86 +1.3 3,967,112 - Psyr_3314 0.86 -0.3 3,967,112 - Psyr_3314 0.86 -0.2 3,967,299 + +0.2 3,967,356 + +0.3 3,967,356 + +0.8 3,967,357 - -0.1 3,967,403 + Psyr_3315 0.21 -1.3 3,967,409 + Psyr_3315 0.23 -0.4 3,967,682 + -1.2 3,967,824 + +0.5 3,967,875 - -0.5 3,967,875 - -1.0 3,967,879 + +0.1 3,967,879 + +0.6 3,967,879 + -0.7
Or see this region's nucleotide sequence