Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3281 and Psyr_3282 are separated by 125 nucleotides Psyr_3282 and Psyr_3283 are separated by 256 nucleotides Psyr_3283 and Psyr_3284 are separated by 9 nucleotides
Psyr_3281: Psyr_3281 - Glycoside hydrolase, family 3, N-terminal, at 3,928,376 to 3,929,386
_3281
Psyr_3282: Psyr_3282 - transcriptional regulator, TetR family, at 3,929,512 to 3,930,228
_3282
Psyr_3283: Psyr_3283 - SOS-response transcriptional repressor, LexA, at 3,930,485 to 3,931,093
_3283
Psyr_3284: Psyr_3284 - SOS cell division inhibitor SulA, at 3,931,103 to 3,931,573
_3284
Position (kb)
3929
3930
3931 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3928.741 kb on - strand, within Psyr_3281 at 3928.909 kb on + strand, within Psyr_3281 at 3929.147 kb on + strand, within Psyr_3281 at 3929.147 kb on + strand, within Psyr_3281 at 3929.386 kb on + strand at 3929.398 kb on + strand at 3929.664 kb on + strand, within Psyr_3282 at 3929.810 kb on + strand, within Psyr_3282 at 3929.810 kb on + strand at 3929.810 kb on + strand, within Psyr_3282 at 3929.811 kb on - strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.831 kb on + strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3929.832 kb on - strand, within Psyr_3282 at 3930.098 kb on + strand, within Psyr_3282 at 3930.138 kb on + strand, within Psyr_3282 at 3930.262 kb on + strand at 3930.262 kb on + strand at 3930.263 kb on - strand at 3930.263 kb on - strand at 3930.263 kb on - strand at 3930.263 kb on - strand at 3930.266 kb on + strand at 3930.334 kb on - strand at 3930.389 kb on - strand at 3930.443 kb on + strand at 3930.444 kb on - strand at 3930.444 kb on - strand at 3930.445 kb on + strand at 3930.446 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,928,741 - Psyr_3281 0.36 -2.9 3,928,909 + Psyr_3281 0.53 +0.5 3,929,147 + Psyr_3281 0.76 +0.2 3,929,147 + Psyr_3281 0.76 +0.8 3,929,386 + -1.8 3,929,398 + +1.8 3,929,664 + Psyr_3282 0.21 -1.6 3,929,810 + Psyr_3282 0.42 +0.8 3,929,810 + +0.2 3,929,810 + Psyr_3282 0.42 +1.2 3,929,811 - Psyr_3282 0.42 -3.3 3,929,831 + Psyr_3282 0.44 -0.4 3,929,831 + Psyr_3282 0.44 -0.2 3,929,831 + Psyr_3282 0.44 -1.6 3,929,831 + Psyr_3282 0.44 +0.8 3,929,831 + Psyr_3282 0.44 -0.3 3,929,831 + Psyr_3282 0.44 +0.2 3,929,832 - Psyr_3282 0.45 -0.8 3,929,832 - Psyr_3282 0.45 -1.2 3,929,832 - Psyr_3282 0.45 -3.0 3,929,832 - Psyr_3282 0.45 -0.4 3,929,832 - Psyr_3282 0.45 -0.7 3,929,832 - Psyr_3282 0.45 -0.4 3,929,832 - Psyr_3282 0.45 +0.8 3,929,832 - Psyr_3282 0.45 -0.6 3,929,832 - Psyr_3282 0.45 +0.0 3,929,832 - Psyr_3282 0.45 -2.3 3,929,832 - Psyr_3282 0.45 -2.0 3,930,098 + Psyr_3282 0.82 -0.4 3,930,138 + Psyr_3282 0.87 -1.7 3,930,262 + -0.7 3,930,262 + -1.6 3,930,263 - +0.5 3,930,263 - +0.3 3,930,263 - +1.2 3,930,263 - -0.4 3,930,266 + -2.2 3,930,334 - +0.4 3,930,389 - -1.2 3,930,443 + +1.4 3,930,444 - -1.7 3,930,444 - +0.4 3,930,445 + -0.3 3,930,446 - +0.5
Or see this region's nucleotide sequence