Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2296 and Psyr_2297 are separated by 66 nucleotides Psyr_2297 and Psyr_2298 overlap by 8 nucleotides
Psyr_2296: Psyr_2296 - Aldo/keto reductase, at 2,668,183 to 2,669,220
_2296
Psyr_2297: Psyr_2297 - glucose 1-dehydrogenase, at 2,669,287 to 2,670,087
_2297
Psyr_2298: Psyr_2298 - Glycoside hydrolase, family 15, at 2,670,080 to 2,671,906
_2298
Position (kb)
2669
2670
2671 Strain fitness (log2 ratio)
-2
-1
0
1 at 2668.340 kb on - strand, within Psyr_2296 at 2668.366 kb on + strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.408 kb on + strand, within Psyr_2296 at 2668.409 kb on - strand, within Psyr_2296 at 2668.802 kb on - strand, within Psyr_2296 at 2668.876 kb on + strand, within Psyr_2296 at 2668.912 kb on + strand, within Psyr_2296 at 2668.913 kb on - strand, within Psyr_2296 at 2668.973 kb on - strand, within Psyr_2296 at 2669.008 kb on + strand, within Psyr_2296 at 2669.063 kb on - strand, within Psyr_2296 at 2669.063 kb on - strand, within Psyr_2296 at 2669.259 kb on + strand at 2669.259 kb on + strand at 2669.260 kb on - strand at 2669.260 kb on - strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.263 kb on - strand at 2669.263 kb on - strand at 2669.398 kb on + strand, within Psyr_2297 at 2669.399 kb on - strand, within Psyr_2297 at 2669.399 kb on - strand, within Psyr_2297 at 2669.617 kb on - strand, within Psyr_2297 at 2669.780 kb on - strand, within Psyr_2297 at 2670.016 kb on + strand at 2670.017 kb on - strand at 2670.017 kb on - strand at 2670.299 kb on + strand, within Psyr_2298 at 2670.299 kb on + strand, within Psyr_2298 at 2670.299 kb on + strand, within Psyr_2298 at 2670.300 kb on - strand, within Psyr_2298 at 2670.740 kb on + strand, within Psyr_2298 at 2670.741 kb on - strand, within Psyr_2298 at 2670.885 kb on - strand, within Psyr_2298 at 2670.917 kb on + strand, within Psyr_2298 at 2670.917 kb on + strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,668,340 - Psyr_2296 0.15 +0.0 2,668,366 + Psyr_2296 0.18 +0.1 2,668,367 - Psyr_2296 0.18 -0.9 2,668,367 - Psyr_2296 0.18 -0.7 2,668,367 - Psyr_2296 0.18 +0.2 2,668,408 + Psyr_2296 0.22 +0.1 2,668,409 - Psyr_2296 0.22 -0.9 2,668,802 - Psyr_2296 0.60 -0.8 2,668,876 + Psyr_2296 0.67 -0.3 2,668,912 + Psyr_2296 0.70 +0.6 2,668,913 - Psyr_2296 0.70 -0.5 2,668,973 - Psyr_2296 0.76 -0.3 2,669,008 + Psyr_2296 0.79 -0.3 2,669,063 - Psyr_2296 0.85 +0.1 2,669,063 - Psyr_2296 0.85 -1.6 2,669,259 + -0.1 2,669,259 + -0.3 2,669,260 - -1.0 2,669,260 - +0.2 2,669,262 + +0.5 2,669,262 + -2.4 2,669,262 + +0.6 2,669,262 + -1.1 2,669,263 - -0.4 2,669,263 - -0.2 2,669,398 + Psyr_2297 0.14 -0.4 2,669,399 - Psyr_2297 0.14 -0.5 2,669,399 - Psyr_2297 0.14 -0.8 2,669,617 - Psyr_2297 0.41 -1.4 2,669,780 - Psyr_2297 0.62 -0.3 2,670,016 + -1.1 2,670,017 - -1.9 2,670,017 - +0.4 2,670,299 + Psyr_2298 0.12 +0.6 2,670,299 + Psyr_2298 0.12 +0.6 2,670,299 + Psyr_2298 0.12 +1.6 2,670,300 - Psyr_2298 0.12 +0.2 2,670,740 + Psyr_2298 0.36 -0.2 2,670,741 - Psyr_2298 0.36 +0.3 2,670,885 - Psyr_2298 0.44 +0.2 2,670,917 + Psyr_2298 0.46 -0.5 2,670,917 + Psyr_2298 0.46 -0.3 2,670,918 - Psyr_2298 0.46 +1.2 2,670,918 - Psyr_2298 0.46 +0.3 2,670,918 - Psyr_2298 0.46 +0.0 2,670,918 - Psyr_2298 0.46 -0.0 2,670,918 - Psyr_2298 0.46 +1.4
Or see this region's nucleotide sequence