Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1642 and Psyr_1643 are separated by 31 nucleotides Psyr_1643 and Psyr_1644 are separated by 13 nucleotides Psyr_1644 and Psyr_1645 are separated by 34 nucleotides Psyr_1645 and Psyr_1646 are separated by 116 nucleotides
Psyr_1642: Psyr_1642 - Maf-like protein, at 1,849,005 to 1,849,658
_1642
Psyr_1643: Psyr_1643 - Protein of unknown function DUF177, at 1,849,690 to 1,850,217
_1643
Psyr_1644: Psyr_1644 - LSU ribosomal protein L32P, at 1,850,231 to 1,850,413
_1644
Psyr_1645: Psyr_1645 - phosphate:acyl-[acyl carrier protein] acyltransferase, at 1,850,448 to 1,851,440
_1645
Psyr_1646: Psyr_1646 - [Acyl-carrier-protein] S-malonyltransferase, at 1,851,557 to 1,852,495
_1646
Position (kb)
1850
1851
1852 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1849.449 kb on + strand, within Psyr_1642 at 1849.450 kb on - strand, within Psyr_1642 at 1849.614 kb on - strand at 1850.507 kb on + strand at 1850.508 kb on - strand at 1851.020 kb on - strand, within Psyr_1645 at 1851.039 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.043 kb on - strand, within Psyr_1645 at 1851.051 kb on + strand, within Psyr_1645 at 1851.052 kb on - strand, within Psyr_1645 at 1851.052 kb on - strand, within Psyr_1645 at 1851.270 kb on - strand, within Psyr_1645 at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.487 kb on + strand at 1851.492 kb on + strand at 1851.492 kb on + strand at 1851.538 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,849,449 + Psyr_1642 0.68 -0.2 1,849,450 - Psyr_1642 0.68 -2.3 1,849,614 - -0.8 1,850,507 + +1.8 1,850,508 - -3.2 1,851,020 - Psyr_1645 0.58 +0.2 1,851,039 - Psyr_1645 0.60 -2.3 1,851,043 - Psyr_1645 0.60 -0.4 1,851,043 - Psyr_1645 0.60 -1.4 1,851,043 - Psyr_1645 0.60 -0.8 1,851,043 - Psyr_1645 0.60 -1.2 1,851,043 - Psyr_1645 0.60 +0.7 1,851,043 - Psyr_1645 0.60 -0.5 1,851,043 - Psyr_1645 0.60 -1.3 1,851,051 + Psyr_1645 0.61 +0.2 1,851,052 - Psyr_1645 0.61 -1.2 1,851,052 - Psyr_1645 0.61 +1.6 1,851,270 - Psyr_1645 0.83 -0.2 1,851,487 + -0.7 1,851,487 + +0.2 1,851,487 + -1.0 1,851,487 + -0.6 1,851,487 + -0.6 1,851,487 + +1.3 1,851,487 + +0.7 1,851,487 + -0.7 1,851,487 + +0.9 1,851,487 + -0.8 1,851,492 + -0.1 1,851,492 + -1.3 1,851,538 + -0.4
Or see this region's nucleotide sequence