Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0936

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
1,070,377	-		Psyr_0935	0.32	+0.5
1,070,469	+		Psyr_0935	0.39	-0.0
1,070,469	+		Psyr_0935	0.39	+0.1
1,070,470	-		Psyr_0935	0.39	-0.5
1,070,470	-		Psyr_0935	0.39	+0.5
1,070,470	-		Psyr_0935	0.39	+0.6
1,070,753	-		Psyr_0935	0.59	-0.2
1,070,856	+		Psyr_0935	0.66	-0.2
1,070,856	+		Psyr_0935	0.66	+0.3
1,070,856	+		Psyr_0935	0.66	-0.3
1,070,856	+		Psyr_0935	0.66	-0.7
1,070,856	+		Psyr_0935	0.66	-1.2
1,070,856	+		Psyr_0935	0.66	-0.1
1,070,856	+		Psyr_0935	0.66	-0.5
1,070,856	+		Psyr_0935	0.66	-0.0
1,070,856	+		Psyr_0935	0.66	+0.2
1,070,856	+		Psyr_0935	0.66	+0.1
1,070,856	+		Psyr_0935	0.66	-0.0
1,070,856	+		Psyr_0935	0.66	-0.4
1,070,856	+		Psyr_0935	0.66	-0.6
1,070,856	+		Psyr_0935	0.66	+0.5
1,070,856	+		Psyr_0935	0.66	-1.4
1,070,856	+		Psyr_0935	0.66	-1.2
1,070,856	+		Psyr_0935	0.66	-1.5
1,070,856	+		Psyr_0935	0.66	-1.2
1,070,856	+		Psyr_0935	0.66	+1.0
1,070,856	+		Psyr_0935	0.66	+0.1
1,070,856	+		Psyr_0935	0.66	-1.0
1,070,857	-		Psyr_0935	0.66	-1.2
1,070,857	-		Psyr_0935	0.66	-0.9
1,070,857	-		Psyr_0935	0.66	-0.5
1,070,857	-		Psyr_0935	0.66	-0.9
1,070,857	-		Psyr_0935	0.66	+0.3
1,070,857	-		Psyr_0935	0.66	-0.9
1,070,857	-		Psyr_0935	0.66	+0.0
1,070,857	-		Psyr_0935	0.66	-1.3
1,070,857	-		Psyr_0935	0.66	-0.1
1,070,857	-		Psyr_0935	0.66	-1.1
1,070,857	-		Psyr_0935	0.66	+0.4
1,070,857	-		Psyr_0935	0.66	-0.1
1,070,857	-		Psyr_0935	0.66	-0.4
1,070,857	-		Psyr_0935	0.66	-0.6
1,070,857	-		Psyr_0935	0.66	+0.3
1,070,857	-		Psyr_0935	0.66	+0.4
1,070,857	-		Psyr_0935	0.66	+0.8
1,070,857	-		Psyr_0935	0.66	+0.6
1,070,857	-		Psyr_0935	0.66	+0.2
1,070,857	-		Psyr_0935	0.66	+1.7
1,070,857	-		Psyr_0935	0.66	-0.0
1,070,857	-		Psyr_0935	0.66	+0.6
1,070,857	-		Psyr_0935	0.66	+2.3
1,070,857	-		Psyr_0935	0.66	+0.0
1,070,857	-		Psyr_0935	0.66	+0.2
1,070,890	-		Psyr_0935	0.69	-0.3
1,070,929	-		Psyr_0935	0.71	-0.2
1,070,929	-		Psyr_0935	0.71	-0.0
1,070,929	-		Psyr_0935	0.71	+0.4
1,070,929	-		Psyr_0935	0.71	+0.5
1,070,929	-		Psyr_0935	0.71	+0.5
1,071,077	+		Psyr_0935	0.82	+0.1
1,071,078	-		Psyr_0935	0.82	-0.6
1,071,102	+		Psyr_0935	0.84	-1.8
1,071,103	-		Psyr_0935	0.84	-1.5
1,071,183	+		Psyr_0935	0.89	-0.4
1,071,275	+				+0.2
1,071,373	+				+0.2
1,071,400	+				-1.2
1,071,405	-				-1.3
1,071,707	+		Psyr_0936	0.29	+0.5
1,071,707	+		Psyr_0936	0.29	-1.4
1,071,707	+		Psyr_0936	0.29	-1.0
1,071,707	+		Psyr_0936	0.29	+1.9
1,071,707	+		Psyr_0936	0.29	-0.0
1,071,707	+		Psyr_0936	0.29	-0.1
1,071,707	+		Psyr_0936	0.29	+0.6
1,071,708	-		Psyr_0936	0.29	+0.3
1,071,721	+		Psyr_0936	0.30	-1.8
1,071,721	+		Psyr_0936	0.30	-0.1
1,071,721	+		Psyr_0936	0.30	-0.8
1,071,721	+		Psyr_0936	0.30	-1.1
1,071,722	-		Psyr_0936	0.30	-0.1
1,071,785	+		Psyr_0936	0.36	-0.2
1,071,900	+		Psyr_0936	0.46	-0.9
1,071,900	+		Psyr_0936	0.46	+0.5
1,071,900	+		Psyr_0936	0.46	-1.9
1,071,901	-		Psyr_0936	0.46	-1.1
1,071,903	+		Psyr_0936	0.46	-0.9
1,071,903	+		Psyr_0936	0.46	-0.5
1,071,903	+		Psyr_0936	0.46	-0.6
1,071,903	+		Psyr_0936	0.46	-1.9
1,071,904	-		Psyr_0936	0.46	+0.1
1,071,904	-		Psyr_0936	0.46	-1.6
1,071,904	-		Psyr_0936	0.46	-0.9
1,071,931	+		Psyr_0936	0.49	+1.6
1,071,932	-		Psyr_0936	0.49	-0.5
1,071,932	-		Psyr_0936	0.49	-0.1
1,071,932	-		Psyr_0936	0.49	-1.3
1,071,979	+		Psyr_0936	0.53	-2.0
1,071,979	+		Psyr_0936	0.53	-0.9
1,071,979	+		Psyr_0936	0.53	-1.0
1,071,979	+		Psyr_0936	0.53	-0.9
1,071,980	-		Psyr_0936	0.53	+0.1
1,071,980	-		Psyr_0936	0.53	-0.9
1,072,041	-		Psyr_0936	0.58	-1.0
1,072,060	+		Psyr_0936	0.60	-0.6
1,072,094	+		Psyr_0936	0.63	-0.5
1,072,094	+		Psyr_0936	0.63	-0.7
1,072,158	+		Psyr_0936	0.68	-0.0
1,072,158	+		Psyr_0936	0.68	-1.9
1,072,158	+		Psyr_0936	0.68	-1.5
1,072,158	+		Psyr_0936	0.68	-0.2
1,072,158	+		Psyr_0936	0.68	+0.1
1,072,158	+		Psyr_0936	0.68	-0.3
1,072,158	+		Psyr_0936	0.68	-0.3
1,072,159	-		Psyr_0936	0.68	+1.4
1,072,159	-		Psyr_0936	0.68	-1.0
1,072,159	-		Psyr_0936	0.68	-1.3
1,072,159	-		Psyr_0936	0.68	-2.2
1,072,159	-		Psyr_0936	0.68	-0.2
1,072,159	-		Psyr_0936	0.68	+0.7
1,072,161	+		Psyr_0936	0.69	-0.6
1,072,162	-		Psyr_0936	0.69	-0.5
1,072,197	+		Psyr_0936	0.72	-1.0
1,072,198	-		Psyr_0936	0.72	+0.6
1,072,198	-		Psyr_0936	0.72	-0.5
1,072,288	-		Psyr_0936	0.80	+0.1
1,072,313	+		Psyr_0936	0.82	-3.2
1,072,313	+		Psyr_0936	0.82	-0.5
1,072,314	-		Psyr_0936	0.82	+0.2
1,072,381	+		Psyr_0936	0.88	+0.5
1,072,447	+				-1.0
1,072,447	+				-0.2
1,072,447	+				-0.9
1,072,447	+				-1.6
1,072,447	+				+0.1
1,072,447	+				+0.7
1,072,447	+				-0.3
1,072,447	+				-1.1
1,072,448	-				-0.5
1,072,448	-				-0.8
1,072,448	-				-1.2
1,072,448	-				+0.4
1,072,448	-				-0.0
1,072,448	-				-0.5
1,072,448	-				+0.2
1,072,448	-				-0.2
1,072,448	-				-0.7
1,072,448	-				-0.7
1,072,448	-				-1.8
1,072,449	+				-3.3
1,072,449	+				-1.1
1,072,449	+				+0.1
1,072,449	+				+0.3
1,072,449	+				-0.2
1,072,449	+				+0.2
1,072,449	+				+0.6
1,072,449	+				-2.0
1,072,449	+				-0.9
1,072,449	+				+1.7
1,072,449	+				-0.8
1,072,449	+				-1.2
1,072,450	-				+3.1
1,072,450	-				+1.3
1,072,450	-				-0.9
1,072,450	-				-1.2
1,072,450	-				-1.2
1,072,450	-				+2.3
1,072,450	-				+0.5
1,072,450	-				-1.2
1,072,450	-				-0.0
1,072,450	-				-1.2
1,072,450	-				-0.7
1,072,450	-				+0.1
1,072,450	-				-0.1
1,072,499	+				+0.8
1,072,499	+				-2.0
1,072,500	-				+1.1
1,072,500	-				-0.5
1,072,500	-				-1.6
1,072,500	-				-1.9
1,072,500	-				-1.0
1,072,500	-				-0.1
1,072,512	+				+0.8
1,072,512	+				+0.6
1,072,512	+				-2.5
1,072,512	+				-0.4
1,072,512	+				-0.5
1,072,512	+				+0.1
1,072,512	+				-0.7
1,072,512	+				-0.5
1,072,512	+				-1.4
1,072,512	+				-0.5
1,072,512	+				-1.7
1,072,512	+				+1.7
1,072,512	+				-0.7
1,072,512	+				+2.1
1,072,512	+				+0.0
1,072,512	+				-0.2
1,072,512	+				+0.3
1,072,512	+				-0.2
1,072,512	+				-0.2
1,072,513	-				-0.3
1,072,513	-				+0.8
1,072,513	-				-0.9
1,072,513	-				-0.7
1,072,513	-				+0.1
1,072,513	-				-0.5
1,072,513	-				-0.5
1,072,513	-				-2.5
1,072,513	-				+0.1
1,072,513	-				-0.4
1,072,513	-				+0.2
1,072,514	+				-0.2
1,072,548	+				+1.5
1,072,548	+				-2.2
1,072,548	+				-0.5
1,072,548	+				+0.4
1,072,548	+				+0.0
1,072,548	+				+0.2
1,072,548	+				-0.5
1,072,549	-				+0.1
1,072,549	-				+0.4
1,072,549	-				-0.7
1,072,549	-				-0.6
1,072,549	-				+0.7
1,072,549	-				+0.6
1,072,549	-				-0.9
1,072,568	+				-0.5
1,072,569	-				+0.2
1,072,569	-				+0.5
1,072,581	+				+0.1
1,072,581	+				+1.4
1,072,581	+				+0.5
1,072,581	+				-0.2
1,072,582	-				+1.5
1,072,582	-				-1.2
1,072,584	+				-2.3
1,072,584	+				-0.5
1,072,585	-				+2.1
1,072,585	-				+0.9
1,072,638	+				-0.0
1,072,639	-				+0.3
1,072,692	+				-0.7
1,072,702	+				-0.1
1,072,703	-				-0.4
1,072,708	+				-0.7
1,072,708	+				+1.2
1,072,709	-				-1.6
1,072,709	-				-0.1
1,072,713	+				+0.6
1,072,713	+				-0.0
1,072,714	-				-1.0
1,072,714	-				-0.3
1,072,714	-				-0.3
1,072,714	-				-0.4
1,072,732	+				-2.5
1,072,732	+				+1.1
1,072,733	-				-0.5
1,072,733	-				+1.0
1,072,796	+				+1.5
1,072,796	+				+1.1
1,072,796	+				-0.6
1,072,796	+				+1.3
1,072,797	-				-1.2
1,072,797	-				+1.0
1,072,797	-				-0.5
1,072,810	+				-1.6
1,072,810	+				+0.7
1,073,005	+		Psyr_0937	0.15	+0.7
1,073,005	+		Psyr_0937	0.15	-0.8
1,073,005	+		Psyr_0937	0.15	-0.8
1,073,005	+		Psyr_0937	0.15	-0.5
1,073,005	+		Psyr_0937	0.15	+0.5
1,073,005	+		Psyr_0937	0.15	+0.7
1,073,006	-		Psyr_0937	0.15	-0.9
1,073,006	-		Psyr_0937	0.15	+0.7
1,073,006	-		Psyr_0937	0.15	+0.7
1,073,006	-		Psyr_0937	0.15	-0.9
1,073,006	-		Psyr_0937	0.15	+0.6
1,073,006	-		Psyr_0937	0.15	-0.5
1,073,006	-		Psyr_0937	0.15	-0.5
1,073,128	+		Psyr_0937	0.23	+0.7
1,073,147	+		Psyr_0937	0.25	+1.3
1,073,262	+		Psyr_0937	0.33	-1.0
1,073,349	+		Psyr_0937	0.39	+0.6
1,073,349	+		Psyr_0937	0.39	-0.0
1,073,350	-		Psyr_0937	0.39	-1.4
1,073,350	-		Psyr_0937	0.39	+0.1
1,073,350	-		Psyr_0937	0.39	-0.1
1,073,367	+		Psyr_0937	0.40	-1.6
1,073,367	+		Psyr_0937	0.40	-0.1
1,073,367	+		Psyr_0937	0.40	-0.1
1,073,367	+		Psyr_0937	0.40	-0.9
1,073,367	+		Psyr_0937	0.40	+0.1
1,073,384	+		Psyr_0937	0.41	-0.8
1,073,385	-		Psyr_0937	0.41	-1.4
1,073,443	+		Psyr_0937	0.46	-0.2
1,073,443	+		Psyr_0937	0.46	+1.1
1,073,443	+		Psyr_0937	0.46	-0.9
1,073,443	+		Psyr_0937	0.46	-1.7
1,073,443	+		Psyr_0937	0.46	+0.1
1,073,443	+		Psyr_0937	0.46	+0.9
1,073,443	+		Psyr_0937	0.46	+0.7
1,073,443	+		Psyr_0937	0.46	-0.8
1,073,444	-		Psyr_0937	0.46	-0.7
1,073,444	-		Psyr_0937	0.46	-0.8
1,073,444	-		Psyr_0937	0.46	+0.6
1,073,444	-		Psyr_0937	0.46	-0.3
1,073,444	-		Psyr_0937	0.46	+2.1
1,073,444	-		Psyr_0937	0.46	+0.1
1,073,444	-		Psyr_0937	0.46	+0.5
1,073,444	-		Psyr_0937	0.46	-2.3
1,073,490	+		Psyr_0937	0.49	-1.5
1,073,490	+		Psyr_0937	0.49	-0.8
1,073,490	+		Psyr_0937	0.49	+1.8
1,073,490	+		Psyr_0937	0.49	+1.9
1,073,490	+		Psyr_0937	0.49	+0.5
1,073,490	+		Psyr_0937	0.49	-0.3
1,073,490	+		Psyr_0937	0.49	+0.3
1,073,490	+		Psyr_0937	0.49	-0.1
1,073,491	-		Psyr_0937	0.49	+1.3
1,073,491	-		Psyr_0937	0.49	+2.3
1,073,491	-		Psyr_0937	0.49	-3.0
1,073,491	-		Psyr_0937	0.49	-0.9
1,073,491	-		Psyr_0937	0.49	-0.6
1,073,491	-		Psyr_0937	0.49	-0.0