Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS23830 and RS_RS23835 are separated by 9 nucleotides RS_RS23835 and RS_RS23840 are separated by 15 nucleotides RS_RS23840 and RS_RS23845 overlap by 4 nucleotides
RS_RS23830: RS_RS23830 - RNA polymerase sigma factor FliA, at 1,750,605 to 1,751,366
_RS23830
RS_RS23835: RS_RS23835 - hypothetical protein, at 1,751,376 to 1,752,143
_RS23835
RS_RS23840: RS_RS23840 - flagellar biosynthesis protein FlhF, at 1,752,159 to 1,754,006
_RS23840
RS_RS23845: RS_RS23845 - flagellar biosynthesis protein FlhA, at 1,754,003 to 1,756,093
_RS23845
Position (kb) 1752
1753
1754
1755 Strain fitness (log2 ratio) -1
0
1
2 at 1751.332 kb on + strand at 1751.332 kb on + strand at 1751.332 kb on + strand at 1751.332 kb on + strand at 1751.332 kb on + strand at 1751.332 kb on + strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.333 kb on - strand at 1751.380 kb on + strand at 1751.418 kb on - strand at 1751.622 kb on - strand, within RS_RS23835 at 1751.641 kb on + strand, within RS_RS23835 at 1751.641 kb on + strand, within RS_RS23835 at 1751.806 kb on + strand, within RS_RS23835 at 1751.806 kb on + strand, within RS_RS23835 at 1751.990 kb on + strand, within RS_RS23835 at 1752.337 kb on + strand at 1752.346 kb on + strand, within RS_RS23840 at 1752.691 kb on + strand, within RS_RS23840 at 1752.692 kb on - strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.931 kb on + strand, within RS_RS23840 at 1752.932 kb on - strand, within RS_RS23840 at 1752.932 kb on - strand, within RS_RS23840 at 1752.964 kb on + strand, within RS_RS23840 at 1752.964 kb on + strand, within RS_RS23840 at 1753.210 kb on + strand, within RS_RS23840 at 1754.035 kb on + strand at 1754.169 kb on + strand at 1754.593 kb on + strand, within RS_RS23845 at 1754.593 kb on + strand, within RS_RS23845 at 1754.593 kb on + strand, within RS_RS23845 at 1754.594 kb on - strand, within RS_RS23845 at 1754.594 kb on - strand, within RS_RS23845 at 1754.594 kb on - strand, within RS_RS23845 at 1754.602 kb on - strand, within RS_RS23845 at 1754.655 kb on + strand, within RS_RS23845 at 1754.656 kb on - strand, within RS_RS23845 at 1754.760 kb on + strand, within RS_RS23845 at 1754.885 kb on - strand, within RS_RS23845 at 1754.885 kb on - strand, within RS_RS23845
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,751,332 + -1.2 1,751,332 + +0.5 1,751,332 + +0.0 1,751,332 + -0.4 1,751,332 + -1.5 1,751,332 + -0.3 1,751,333 - +1.9 1,751,333 - +0.9 1,751,333 - +0.9 1,751,333 - +0.4 1,751,333 - +0.4 1,751,333 - +1.5 1,751,333 - +1.7 1,751,380 + +0.2 1,751,418 - -0.9 1,751,622 - RS_RS23835 0.32 -0.1 1,751,641 + RS_RS23835 0.35 +0.2 1,751,641 + RS_RS23835 0.35 -0.5 1,751,806 + RS_RS23835 0.56 +0.9 1,751,806 + RS_RS23835 0.56 -0.5 1,751,990 + RS_RS23835 0.80 -0.2 1,752,337 + -0.1 1,752,346 + RS_RS23840 0.10 +0.3 1,752,691 + RS_RS23840 0.29 +1.4 1,752,692 - RS_RS23840 0.29 -0.1 1,752,931 + RS_RS23840 0.42 +0.2 1,752,931 + RS_RS23840 0.42 -0.4 1,752,931 + RS_RS23840 0.42 -0.2 1,752,931 + RS_RS23840 0.42 +1.3 1,752,931 + RS_RS23840 0.42 +1.0 1,752,931 + RS_RS23840 0.42 +0.9 1,752,932 - RS_RS23840 0.42 -0.7 1,752,932 - RS_RS23840 0.42 +0.0 1,752,964 + RS_RS23840 0.44 -0.2 1,752,964 + RS_RS23840 0.44 +0.1 1,753,210 + RS_RS23840 0.57 +1.7 1,754,035 + +0.6 1,754,169 + -1.1 1,754,593 + RS_RS23845 0.28 +1.9 1,754,593 + RS_RS23845 0.28 -0.6 1,754,593 + RS_RS23845 0.28 +0.7 1,754,594 - RS_RS23845 0.28 +0.9 1,754,594 - RS_RS23845 0.28 -0.2 1,754,594 - RS_RS23845 0.28 +0.3 1,754,602 - RS_RS23845 0.29 -0.3 1,754,655 + RS_RS23845 0.31 -0.3 1,754,656 - RS_RS23845 0.31 -0.1 1,754,760 + RS_RS23845 0.36 -0.4 1,754,885 - RS_RS23845 0.42 +0.0 1,754,885 - RS_RS23845 0.42 -0.4
Or see this region's nucleotide sequence