Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS13735 and RS_RS13740 are separated by 101 nucleotides RS_RS13740 and RS_RS13745 are separated by 150 nucleotides RS_RS13745 and RS_RS13750 are separated by 75 nucleotides
RS_RS13735: RS_RS13735 - 4-hydroxy-tetrahydrodipicolinate reductase, at 2,956,139 to 2,956,930
_RS13735
RS_RS13740: RS_RS13740 - outer membrane protein assembly factor BamE, at 2,957,032 to 2,957,691
_RS13740
RS_RS13745: RS_RS13745 - ferric iron uptake transcriptional regulator, at 2,957,842 to 2,958,273
_RS13745
RS_RS13750: RS_RS13750 - transcriptional regulator, at 2,958,349 to 2,959,392
_RS13750
Position (kb) 2957
2958
2959 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 2957.391 kb on - strand, within RS_RS13740 at 2957.822 kb on + strand at 2957.822 kb on + strand at 2958.605 kb on + strand, within RS_RS13750 at 2958.605 kb on + strand, within RS_RS13750 at 2958.744 kb on - strand, within RS_RS13750 at 2958.822 kb on - strand, within RS_RS13750 at 2958.822 kb on - strand, within RS_RS13750 at 2959.207 kb on - strand, within RS_RS13750
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,957,391 - RS_RS13740 0.54 +0.1 2,957,822 + -1.7 2,957,822 + -1.3 2,958,605 + RS_RS13750 0.25 +3.8 2,958,605 + RS_RS13750 0.25 +3.8 2,958,744 - RS_RS13750 0.38 +3.9 2,958,822 - RS_RS13750 0.45 +3.8 2,958,822 - RS_RS13750 0.45 +3.8 2,959,207 - RS_RS13750 0.82 +3.9
Or see this region's nucleotide sequence