Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS07835 and RS_RS07840 are separated by 12 nucleotides RS_RS07840 and RS_RS07845 overlap by 4 nucleotides RS_RS07845 and RS_RS07850 are separated by 76 nucleotides
RS_RS07835: RS_RS07835 - FAD-binding oxidoreductase, at 1,672,034 to 1,673,446
_RS07835
RS_RS07840: RS_RS07840 - DUF2069 domain-containing protein, at 1,673,459 to 1,673,848
_RS07840
RS_RS07845: RS_RS07845 - NAD(P)H:quinone oxidoreductase, at 1,673,845 to 1,674,438
_RS07845
RS_RS07850: RS_RS07850 - membrane protein, at 1,674,515 to 1,675,840
_RS07850
Position (kb) 1673
1674
1675 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1673.361 kb on + strand at 1673.362 kb on - strand at 1673.362 kb on - strand at 1673.655 kb on + strand, within RS_RS07840 at 1674.173 kb on + strand, within RS_RS07845 at 1674.417 kb on - strand at 1674.468 kb on + strand at 1674.469 kb on - strand at 1674.734 kb on + strand, within RS_RS07850 at 1674.786 kb on - strand, within RS_RS07850 at 1674.786 kb on - strand, within RS_RS07850 at 1675.112 kb on + strand, within RS_RS07850 at 1675.112 kb on + strand, within RS_RS07850 at 1675.112 kb on + strand, within RS_RS07850 at 1675.113 kb on - strand, within RS_RS07850 at 1675.113 kb on - strand, within RS_RS07850 at 1675.113 kb on - strand, within RS_RS07850 at 1675.113 kb on - strand, within RS_RS07850 at 1675.113 kb on - strand, within RS_RS07850 at 1675.214 kb on + strand, within RS_RS07850 at 1675.214 kb on + strand, within RS_RS07850 at 1675.214 kb on + strand, within RS_RS07850 at 1675.214 kb on + strand, within RS_RS07850 at 1675.214 kb on + strand, within RS_RS07850 at 1675.235 kb on + strand, within RS_RS07850 at 1675.235 kb on + strand at 1675.235 kb on + strand, within RS_RS07850 at 1675.236 kb on - strand, within RS_RS07850 at 1675.289 kb on + strand, within RS_RS07850 at 1675.338 kb on + strand, within RS_RS07850 at 1675.339 kb on - strand, within RS_RS07850 at 1675.359 kb on - strand, within RS_RS07850
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,673,361 + -0.9 1,673,362 - +1.3 1,673,362 - +1.0 1,673,655 + RS_RS07840 0.50 +0.4 1,674,173 + RS_RS07845 0.55 -0.0 1,674,417 - -0.6 1,674,468 + +0.6 1,674,469 - -0.4 1,674,734 + RS_RS07850 0.17 +0.6 1,674,786 - RS_RS07850 0.20 +0.3 1,674,786 - RS_RS07850 0.20 +0.6 1,675,112 + RS_RS07850 0.45 +1.6 1,675,112 + RS_RS07850 0.45 -0.9 1,675,112 + RS_RS07850 0.45 -0.1 1,675,113 - RS_RS07850 0.45 -2.3 1,675,113 - RS_RS07850 0.45 +1.6 1,675,113 - RS_RS07850 0.45 -1.6 1,675,113 - RS_RS07850 0.45 -1.3 1,675,113 - RS_RS07850 0.45 +1.1 1,675,214 + RS_RS07850 0.53 +0.7 1,675,214 + RS_RS07850 0.53 +3.1 1,675,214 + RS_RS07850 0.53 +0.6 1,675,214 + RS_RS07850 0.53 -0.0 1,675,214 + RS_RS07850 0.53 +1.6 1,675,235 + RS_RS07850 0.54 -0.4 1,675,235 + +1.6 1,675,235 + RS_RS07850 0.54 +1.0 1,675,236 - RS_RS07850 0.54 -2.2 1,675,289 + RS_RS07850 0.58 +0.1 1,675,338 + RS_RS07850 0.62 -1.8 1,675,339 - RS_RS07850 0.62 -0.7 1,675,359 - RS_RS07850 0.64 -0.0
Or see this region's nucleotide sequence