Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS03030 and RS_RS03035 are separated by 205 nucleotides RS_RS03035 and RS_RS03040 are separated by 23 nucleotides RS_RS03040 and RS_RS03045 are separated by 101 nucleotides
RS_RS03030: RS_RS03030 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 651,399 to 652,505
_RS03030
RS_RS03035: RS_RS03035 - methyl-accepting chemotaxis protein, at 652,711 to 654,513
_RS03035
RS_RS03040: RS_RS03040 - glutathione S-transferase family protein, at 654,537 to 655,178
_RS03040
RS_RS03045: RS_RS03045 - hypothetical protein, at 655,280 to 655,526
_RS03045
Position (kb) 652
653
654
655 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 651.734 kb on - strand, within RS_RS03030 at 652.102 kb on + strand, within RS_RS03030 at 652.103 kb on - strand, within RS_RS03030 at 652.103 kb on - strand, within RS_RS03030 at 652.241 kb on + strand, within RS_RS03030 at 652.242 kb on - strand, within RS_RS03030 at 652.242 kb on - strand, within RS_RS03030 at 652.243 kb on + strand, within RS_RS03030 at 652.244 kb on - strand, within RS_RS03030 at 652.244 kb on - strand, within RS_RS03030 at 652.372 kb on + strand, within RS_RS03030 at 652.372 kb on + strand, within RS_RS03030 at 652.373 kb on - strand, within RS_RS03030 at 652.373 kb on - strand, within RS_RS03030 at 652.373 kb on - strand, within RS_RS03030 at 652.376 kb on - strand, within RS_RS03030 at 652.376 kb on - strand, within RS_RS03030 at 652.376 kb on - strand, within RS_RS03030 at 652.556 kb on - strand at 652.556 kb on - strand at 652.556 kb on - strand at 652.690 kb on + strand at 652.690 kb on + strand at 652.690 kb on + strand at 652.993 kb on + strand, within RS_RS03035 at 652.993 kb on + strand, within RS_RS03035 at 653.017 kb on + strand, within RS_RS03035 at 653.018 kb on - strand, within RS_RS03035 at 653.018 kb on - strand, within RS_RS03035 at 653.054 kb on - strand, within RS_RS03035 at 653.077 kb on + strand, within RS_RS03035 at 653.122 kb on + strand, within RS_RS03035 at 653.122 kb on + strand, within RS_RS03035 at 653.122 kb on + strand, within RS_RS03035 at 654.628 kb on + strand, within RS_RS03040 at 654.628 kb on + strand, within RS_RS03040 at 654.734 kb on - strand, within RS_RS03040 at 654.865 kb on + strand, within RS_RS03040 at 654.865 kb on + strand, within RS_RS03040 at 654.886 kb on + strand, within RS_RS03040 at 654.887 kb on - strand, within RS_RS03040 at 654.937 kb on + strand, within RS_RS03040 at 654.938 kb on - strand, within RS_RS03040 at 654.938 kb on - strand, within RS_RS03040 at 654.952 kb on + strand, within RS_RS03040 at 654.953 kb on - strand, within RS_RS03040 at 654.958 kb on + strand, within RS_RS03040 at 654.985 kb on - strand, within RS_RS03040 at 655.036 kb on + strand, within RS_RS03040 at 655.102 kb on - strand, within RS_RS03040 at 655.151 kb on - strand at 655.151 kb on - strand at 655.212 kb on + strand at 655.212 kb on + strand at 655.213 kb on - strand at 655.213 kb on - strand at 655.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 651,734 - RS_RS03030 0.30 +1.6 652,102 + RS_RS03030 0.64 +0.2 652,103 - RS_RS03030 0.64 -0.1 652,103 - RS_RS03030 0.64 -0.0 652,241 + RS_RS03030 0.76 +0.5 652,242 - RS_RS03030 0.76 +1.6 652,242 - RS_RS03030 0.76 +0.1 652,243 + RS_RS03030 0.76 -1.3 652,244 - RS_RS03030 0.76 +0.1 652,244 - RS_RS03030 0.76 -0.4 652,372 + RS_RS03030 0.88 +0.1 652,372 + RS_RS03030 0.88 +0.5 652,373 - RS_RS03030 0.88 +0.1 652,373 - RS_RS03030 0.88 +0.2 652,373 - RS_RS03030 0.88 -0.8 652,376 - RS_RS03030 0.88 +0.0 652,376 - RS_RS03030 0.88 -1.0 652,376 - RS_RS03030 0.88 +0.1 652,556 - -0.4 652,556 - +3.1 652,556 - +0.0 652,690 + +1.1 652,690 + +1.8 652,690 + +0.5 652,993 + RS_RS03035 0.16 -0.0 652,993 + RS_RS03035 0.16 -0.2 653,017 + RS_RS03035 0.17 -0.3 653,018 - RS_RS03035 0.17 -0.8 653,018 - RS_RS03035 0.17 -0.9 653,054 - RS_RS03035 0.19 +0.3 653,077 + RS_RS03035 0.20 -0.7 653,122 + RS_RS03035 0.23 -2.7 653,122 + RS_RS03035 0.23 +0.2 653,122 + RS_RS03035 0.23 -0.4 654,628 + RS_RS03040 0.14 +1.4 654,628 + RS_RS03040 0.14 -0.0 654,734 - RS_RS03040 0.31 -1.7 654,865 + RS_RS03040 0.51 +0.2 654,865 + RS_RS03040 0.51 -0.8 654,886 + RS_RS03040 0.54 -0.2 654,887 - RS_RS03040 0.55 -0.2 654,937 + RS_RS03040 0.62 +1.6 654,938 - RS_RS03040 0.62 -0.1 654,938 - RS_RS03040 0.62 +0.8 654,952 + RS_RS03040 0.65 -0.8 654,953 - RS_RS03040 0.65 +0.3 654,958 + RS_RS03040 0.66 -0.1 654,985 - RS_RS03040 0.70 -1.6 655,036 + RS_RS03040 0.78 -0.1 655,102 - RS_RS03040 0.88 +0.9 655,151 - -0.0 655,151 - -0.0 655,212 + +0.9 655,212 + +0.6 655,213 - +0.7 655,213 - +0.1 655,213 - +2.6
Or see this region's nucleotide sequence