Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS23780 and RS_RS23785 are separated by 82 nucleotides RS_RS23785 and RS_RS23790 are separated by 99 nucleotides RS_RS23790 and RS_RS23795 are separated by 308 nucleotides
RS_RS23780: RS_RS23780 - mercuric reductase, at 1,739,617 to 1,740,996
_RS23780
RS_RS23785: RS_RS23785 - hypothetical protein, at 1,741,079 to 1,741,420
_RS23785
RS_RS23790: RS_RS23790 - hypothetical protein, at 1,741,520 to 1,742,077
_RS23790
RS_RS23795: RS_RS23795 - sulfonate ABC transporter substrate-binding protein, at 1,742,386 to 1,743,390
_RS23795
Position (kb)
1741
1742 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1740.085 kb on + strand, within RS_RS23780 at 1740.154 kb on + strand, within RS_RS23780 at 1740.155 kb on - strand, within RS_RS23780 at 1740.155 kb on - strand, within RS_RS23780 at 1740.254 kb on + strand, within RS_RS23780 at 1740.254 kb on + strand, within RS_RS23780 at 1740.255 kb on - strand, within RS_RS23780 at 1740.255 kb on - strand, within RS_RS23780 at 1740.255 kb on - strand, within RS_RS23780 at 1740.482 kb on - strand, within RS_RS23780 at 1740.574 kb on + strand, within RS_RS23780 at 1740.574 kb on + strand, within RS_RS23780 at 1740.575 kb on - strand, within RS_RS23780 at 1740.575 kb on - strand, within RS_RS23780 at 1740.575 kb on - strand, within RS_RS23780 at 1740.575 kb on - strand, within RS_RS23780 at 1740.575 kb on - strand, within RS_RS23780 at 1740.583 kb on + strand, within RS_RS23780 at 1740.584 kb on - strand, within RS_RS23780 at 1740.892 kb on + strand at 1740.892 kb on + strand at 1740.892 kb on + strand at 1740.893 kb on - strand at 1740.893 kb on - strand at 1741.285 kb on - strand, within RS_RS23785 at 1741.356 kb on + strand, within RS_RS23785 at 1741.356 kb on + strand, within RS_RS23785 at 1741.356 kb on + strand, within RS_RS23785 at 1741.357 kb on - strand, within RS_RS23785 at 1741.357 kb on - strand, within RS_RS23785 at 1741.357 kb on - strand, within RS_RS23785 at 1741.374 kb on + strand, within RS_RS23785 at 1741.374 kb on + strand, within RS_RS23785 at 1741.375 kb on - strand, within RS_RS23785 at 1741.445 kb on - strand at 1741.445 kb on - strand at 1741.474 kb on + strand at 1741.474 kb on + strand at 1741.475 kb on - strand at 1741.475 kb on - strand at 1741.477 kb on - strand at 1741.593 kb on + strand, within RS_RS23790 at 1741.828 kb on - strand, within RS_RS23790 at 1741.831 kb on + strand, within RS_RS23790 at 1742.114 kb on + strand at 1742.115 kb on - strand at 1742.286 kb on + strand at 1742.287 kb on - strand at 1742.343 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,740,085 + RS_RS23780 0.34 -0.8 1,740,154 + RS_RS23780 0.39 -1.4 1,740,155 - RS_RS23780 0.39 -0.0 1,740,155 - RS_RS23780 0.39 +1.8 1,740,254 + RS_RS23780 0.46 -1.2 1,740,254 + RS_RS23780 0.46 -1.2 1,740,255 - RS_RS23780 0.46 -1.1 1,740,255 - RS_RS23780 0.46 +0.2 1,740,255 - RS_RS23780 0.46 -1.7 1,740,482 - RS_RS23780 0.63 -0.4 1,740,574 + RS_RS23780 0.69 -0.5 1,740,574 + RS_RS23780 0.69 -0.5 1,740,575 - RS_RS23780 0.69 -0.1 1,740,575 - RS_RS23780 0.69 -1.4 1,740,575 - RS_RS23780 0.69 +0.9 1,740,575 - RS_RS23780 0.69 +0.2 1,740,575 - RS_RS23780 0.69 +0.2 1,740,583 + RS_RS23780 0.70 -0.3 1,740,584 - RS_RS23780 0.70 +0.5 1,740,892 + -0.8 1,740,892 + -1.0 1,740,892 + -0.5 1,740,893 - +0.2 1,740,893 - -0.8 1,741,285 - RS_RS23785 0.60 -0.5 1,741,356 + RS_RS23785 0.81 -0.8 1,741,356 + RS_RS23785 0.81 +0.0 1,741,356 + RS_RS23785 0.81 -1.0 1,741,357 - RS_RS23785 0.81 +0.3 1,741,357 - RS_RS23785 0.81 +0.4 1,741,357 - RS_RS23785 0.81 +1.8 1,741,374 + RS_RS23785 0.86 +0.8 1,741,374 + RS_RS23785 0.86 +1.3 1,741,375 - RS_RS23785 0.87 +0.3 1,741,445 - +0.2 1,741,445 - +0.6 1,741,474 + -0.5 1,741,474 + -2.2 1,741,475 - -0.6 1,741,475 - +0.8 1,741,477 - -1.0 1,741,593 + RS_RS23790 0.13 -1.4 1,741,828 - RS_RS23790 0.55 +0.7 1,741,831 + RS_RS23790 0.56 +0.2 1,742,114 + -1.7 1,742,115 - -1.4 1,742,286 + -1.5 1,742,287 - -1.0 1,742,343 + +1.8
Or see this region's nucleotide sequence