Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS04710 and RS_RS04715 are separated by 207 nucleotides RS_RS04715 and RS_RS04720 overlap by 4 nucleotides
RS_RS04705: RS_RS04705 - dihydrofolate reductase, at 994,374 to 994,877
_RS04705
RS_RS04710: RS_RS04710 - thymidylate synthase, at 994,874 to 995,668
_RS04710
RS_RS04715: RS_RS04715 - serine/threonine dehydratase, at 995,876 to 996,880
_RS04715
RS_RS04720: RS_RS04720 - membrane protein, at 996,877 to 997,569
_RS04720
Position (kb) 995
996
997 Strain fitness (log2 ratio) -2
-1
0
1
2 at 995.706 kb on + strand at 995.739 kb on + strand at 996.043 kb on + strand, within RS_RS04715 at 996.044 kb on - strand, within RS_RS04715 at 996.083 kb on + strand, within RS_RS04715 at 996.083 kb on + strand, within RS_RS04715 at 996.383 kb on + strand, within RS_RS04715 at 996.384 kb on - strand, within RS_RS04715 at 996.536 kb on + strand, within RS_RS04715 at 996.536 kb on + strand, within RS_RS04715 at 996.536 kb on + strand, within RS_RS04715 at 996.537 kb on - strand, within RS_RS04715 at 996.537 kb on - strand, within RS_RS04715 at 996.542 kb on + strand, within RS_RS04715 at 996.542 kb on + strand, within RS_RS04715 at 996.543 kb on - strand, within RS_RS04715 at 996.707 kb on + strand, within RS_RS04715 at 997.764 kb on + strand at 997.764 kb on + strand at 997.764 kb on + strand at 997.764 kb on + strand at 997.790 kb on - strand at 997.792 kb on - strand at 997.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 995,706 + +0.3 995,739 + -0.9 996,043 + RS_RS04715 0.17 -1.3 996,044 - RS_RS04715 0.17 -0.3 996,083 + RS_RS04715 0.21 -1.5 996,083 + RS_RS04715 0.21 +2.0 996,383 + RS_RS04715 0.50 -1.5 996,384 - RS_RS04715 0.51 +0.3 996,536 + RS_RS04715 0.66 -0.3 996,536 + RS_RS04715 0.66 -1.5 996,536 + RS_RS04715 0.66 +0.2 996,537 - RS_RS04715 0.66 -0.3 996,537 - RS_RS04715 0.66 -0.2 996,542 + RS_RS04715 0.66 -0.1 996,542 + RS_RS04715 0.66 +0.8 996,543 - RS_RS04715 0.66 -0.9 996,707 + RS_RS04715 0.83 +0.5 997,764 + -2.5 997,764 + -1.6 997,764 + +0.1 997,764 + -1.3 997,790 - +0.1 997,792 - -0.3 997,792 - -0.1
Or see this region's nucleotide sequence