Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS03700 and RS_RS03705 are separated by 24 nucleotides RS_RS03705 and RS_RS03710 are separated by 69 nucleotides RS_RS03710 and RS_RS03715 are separated by 162 nucleotides RS_RS03715 and RS_RS03720 are separated by 18 nucleotides
RS_RS03700: RS_RS03700 - Tol-Pal system beta propeller repeat protein TolB, at 781,670 to 782,971
_RS03700
RS_RS03705: RS_RS03705 - peptidoglycan-associated lipoprotein Pal, at 782,996 to 783,514
_RS03705
RS_RS03710: RS_RS03710 - tol-pal system protein YbgF, at 783,584 to 784,357
_RS03710
RS_RS03715: RS_RS03715 - 7-cyano-7-deazaguanine synthase, at 784,520 to 785,194
_RS03715
RS_RS03720: RS_RS03720 - YeeE/YedE family protein, at 785,213 to 786,328
_RS03720
Position (kb) 783
784
785 Strain fitness (log2 ratio) -2
-1
0
1 at 782.609 kb on + strand, within RS_RS03700 at 782.609 kb on + strand, within RS_RS03700 at 782.718 kb on - strand, within RS_RS03700 at 782.750 kb on + strand, within RS_RS03700 at 782.751 kb on - strand, within RS_RS03700 at 782.801 kb on + strand, within RS_RS03700 at 782.846 kb on + strand at 782.846 kb on + strand at 782.860 kb on - strand at 783.225 kb on - strand at 783.225 kb on - strand, within RS_RS03705 at 783.566 kb on + strand at 783.566 kb on + strand at 783.566 kb on + strand at 783.566 kb on + strand at 783.567 kb on - strand at 783.902 kb on + strand, within RS_RS03710 at 783.902 kb on + strand, within RS_RS03710 at 783.903 kb on - strand, within RS_RS03710 at 783.905 kb on + strand at 784.001 kb on + strand, within RS_RS03710 at 784.148 kb on + strand, within RS_RS03710 at 784.607 kb on + strand, within RS_RS03715 at 784.607 kb on + strand, within RS_RS03715 at 784.607 kb on + strand, within RS_RS03715 at 784.799 kb on + strand, within RS_RS03715 at 784.799 kb on + strand, within RS_RS03715 at 784.800 kb on - strand, within RS_RS03715 at 784.800 kb on - strand, within RS_RS03715 at 784.800 kb on - strand, within RS_RS03715 at 784.928 kb on + strand, within RS_RS03715 at 784.941 kb on - strand, within RS_RS03715 at 784.941 kb on - strand, within RS_RS03715 at 785.067 kb on - strand, within RS_RS03715 at 785.207 kb on + strand at 785.208 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 782,609 + RS_RS03700 0.72 -1.8 782,609 + RS_RS03700 0.72 -2.1 782,718 - RS_RS03700 0.80 -1.6 782,750 + RS_RS03700 0.83 +0.7 782,751 - RS_RS03700 0.83 +0.7 782,801 + RS_RS03700 0.87 -1.8 782,846 + -0.3 782,846 + -1.1 782,860 - +0.1 783,225 - +0.1 783,225 - RS_RS03705 0.44 -0.6 783,566 + +0.6 783,566 + -1.9 783,566 + +0.1 783,566 + -0.0 783,567 - +1.7 783,902 + RS_RS03710 0.41 -0.6 783,902 + RS_RS03710 0.41 -1.3 783,903 - RS_RS03710 0.41 -1.9 783,905 + +0.1 784,001 + RS_RS03710 0.54 +0.0 784,148 + RS_RS03710 0.73 +0.3 784,607 + RS_RS03715 0.13 -1.7 784,607 + RS_RS03715 0.13 -0.6 784,607 + RS_RS03715 0.13 +0.0 784,799 + RS_RS03715 0.41 -2.0 784,799 + RS_RS03715 0.41 +1.7 784,800 - RS_RS03715 0.41 -0.6 784,800 - RS_RS03715 0.41 -0.3 784,800 - RS_RS03715 0.41 -0.3 784,928 + RS_RS03715 0.60 +0.7 784,941 - RS_RS03715 0.62 -0.3 784,941 - RS_RS03715 0.62 -2.0 785,067 - RS_RS03715 0.81 -0.4 785,207 + -2.1 785,208 - +1.3
Or see this region's nucleotide sequence