Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS20320 and RS_RS20325 are separated by 516 nucleotides RS_RS20325 and RS_RS26205 are separated by 17 nucleotides
RS_RS20320: RS_RS20320 - DUF2520 domain-containing protein, at 847,138 to 848,022
_RS20320
RS_RS20325: RS_RS20325 - RND transporter, at 848,539 to 850,107
_RS20325
RS_RS26205: RS_RS26205 - efflux transporter periplasmic adaptor subunit, at 850,125 to 851,235
_RS26205
Position (kb) 848
849
850
851 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.013 kb on + strand at 848.054 kb on + strand at 848.055 kb on - strand at 848.055 kb on - strand at 848.055 kb on - strand at 848.055 kb on - strand at 848.191 kb on + strand at 848.191 kb on + strand at 848.191 kb on + strand at 848.192 kb on - strand at 848.192 kb on - strand at 848.192 kb on - strand at 848.198 kb on - strand at 848.240 kb on + strand at 848.240 kb on + strand at 848.241 kb on - strand at 848.241 kb on - strand at 848.241 kb on - strand at 848.241 kb on - strand at 848.374 kb on + strand at 848.374 kb on + strand at 848.496 kb on + strand at 849.029 kb on + strand, within RS_RS20325 at 849.029 kb on + strand, within RS_RS20325 at 849.029 kb on + strand, within RS_RS20325 at 849.030 kb on + strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.030 kb on - strand, within RS_RS20325 at 849.157 kb on + strand, within RS_RS20325 at 849.157 kb on + strand, within RS_RS20325 at 849.158 kb on - strand, within RS_RS20325 at 849.158 kb on - strand, within RS_RS20325 at 849.600 kb on + strand, within RS_RS20325 at 849.601 kb on - strand, within RS_RS20325 at 849.601 kb on - strand, within RS_RS20325 at 849.601 kb on - strand, within RS_RS20325 at 849.601 kb on - strand, within RS_RS20325 at 849.997 kb on + strand at 849.997 kb on + strand at 849.997 kb on + strand at 849.997 kb on + strand at 849.998 kb on - strand at 850.542 kb on + strand, within RS_RS26205 at 850.888 kb on - strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.941 kb on + strand, within RS_RS26205 at 850.942 kb on - strand, within RS_RS26205 at 851.019 kb on + strand, within RS_RS26205 at 851.020 kb on - strand, within RS_RS26205 at 851.020 kb on - strand, within RS_RS26205 at 851.025 kb on + strand, within RS_RS26205 at 851.026 kb on - strand, within RS_RS26205 at 851.026 kb on - strand, within RS_RS26205 at 851.026 kb on - strand, within RS_RS26205 at 851.026 kb on - strand, within RS_RS26205
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 848,013 + -1.0 848,013 + -0.8 848,013 + -1.2 848,013 + +0.3 848,013 + -4.1 848,013 + +1.5 848,013 + -0.0 848,013 + -0.5 848,013 + -0.5 848,013 + -0.5 848,054 + -0.5 848,055 - -3.4 848,055 - -0.3 848,055 - -1.0 848,055 - -0.8 848,191 + +1.5 848,191 + +0.1 848,191 + +1.1 848,192 - -0.5 848,192 - +0.3 848,192 - -0.0 848,198 - -2.9 848,240 + -0.9 848,240 + +0.5 848,241 - +1.5 848,241 - +0.8 848,241 - +0.3 848,241 - +0.5 848,374 + -0.0 848,374 + -0.5 848,496 + +1.5 849,029 + RS_RS20325 0.31 +0.5 849,029 + RS_RS20325 0.31 +1.1 849,029 + RS_RS20325 0.31 +0.2 849,030 + RS_RS20325 0.31 +1.0 849,030 - RS_RS20325 0.31 -0.0 849,030 - RS_RS20325 0.31 +0.5 849,030 - RS_RS20325 0.31 -0.0 849,030 - RS_RS20325 0.31 +1.1 849,030 - RS_RS20325 0.31 +0.2 849,030 - RS_RS20325 0.31 +0.3 849,157 + RS_RS20325 0.39 +0.1 849,157 + RS_RS20325 0.39 -0.8 849,158 - RS_RS20325 0.39 +0.5 849,158 - RS_RS20325 0.39 +0.2 849,600 + RS_RS20325 0.68 +0.5 849,601 - RS_RS20325 0.68 +0.2 849,601 - RS_RS20325 0.68 -0.1 849,601 - RS_RS20325 0.68 +0.4 849,601 - RS_RS20325 0.68 -1.0 849,997 + -0.2 849,997 + -0.8 849,997 + +0.1 849,997 + +0.5 849,998 - -0.7 850,542 + RS_RS26205 0.38 -0.2 850,888 - RS_RS26205 0.69 +0.9 850,941 + RS_RS26205 0.73 +1.5 850,941 + RS_RS26205 0.73 -0.3 850,941 + RS_RS26205 0.73 -0.1 850,941 + RS_RS26205 0.73 +0.4 850,941 + RS_RS26205 0.73 +0.4 850,941 + RS_RS26205 0.73 +0.3 850,941 + RS_RS26205 0.73 +0.5 850,942 - RS_RS26205 0.74 +0.5 851,019 + RS_RS26205 0.80 +0.5 851,020 - RS_RS26205 0.81 -1.0 851,020 - RS_RS26205 0.81 -0.5 851,025 + RS_RS26205 0.81 +1.8 851,026 - RS_RS26205 0.81 +0.5 851,026 - RS_RS26205 0.81 -0.5 851,026 - RS_RS26205 0.81 -0.3 851,026 - RS_RS26205 0.81 -0.3
Or see this region's nucleotide sequence