Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS18105 and RS_RS18110 are separated by 23 nucleotides RS_RS18110 and RS_RS18115 are separated by 994 nucleotides
RS_RS18105: RS_RS18105 - aspartate aminotransferase family protein, at 244,341 to 246,851
_RS18105
RS_RS18110: RS_RS18110 - decarboxylase, at 246,875 to 249,301
_RS18110
RS_RS18115: RS_RS18115 - hypothetical protein, at 250,296 to 251,042
_RS18115
Position (kb) 246
247
248
249
250 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 246.086 kb on - strand, within RS_RS18105 at 246.145 kb on + strand, within RS_RS18105 at 246.185 kb on - strand, within RS_RS18105 at 246.185 kb on - strand, within RS_RS18105 at 246.202 kb on + strand, within RS_RS18105 at 246.202 kb on + strand, within RS_RS18105 at 246.202 kb on + strand, within RS_RS18105 at 246.203 kb on - strand, within RS_RS18105 at 246.259 kb on + strand, within RS_RS18105 at 246.260 kb on - strand, within RS_RS18105 at 246.439 kb on + strand, within RS_RS18105 at 246.439 kb on + strand, within RS_RS18105 at 246.649 kb on + strand at 246.649 kb on + strand at 246.649 kb on + strand at 246.649 kb on + strand at 246.650 kb on - strand at 246.837 kb on - strand at 246.837 kb on - strand at 246.837 kb on - strand at 247.110 kb on + strand at 247.126 kb on - strand, within RS_RS18110 at 247.126 kb on - strand, within RS_RS18110 at 247.161 kb on + strand, within RS_RS18110 at 247.161 kb on + strand, within RS_RS18110 at 247.162 kb on - strand, within RS_RS18110 at 247.162 kb on - strand, within RS_RS18110 at 247.302 kb on + strand, within RS_RS18110 at 247.302 kb on + strand, within RS_RS18110 at 247.303 kb on - strand, within RS_RS18110 at 247.416 kb on + strand, within RS_RS18110 at 247.428 kb on + strand, within RS_RS18110 at 247.435 kb on - strand, within RS_RS18110 at 247.684 kb on + strand, within RS_RS18110 at 247.685 kb on - strand, within RS_RS18110 at 247.827 kb on + strand, within RS_RS18110 at 247.827 kb on + strand, within RS_RS18110 at 247.828 kb on - strand, within RS_RS18110 at 247.869 kb on + strand, within RS_RS18110 at 247.869 kb on + strand, within RS_RS18110 at 247.881 kb on + strand, within RS_RS18110 at 248.587 kb on - strand, within RS_RS18110 at 248.587 kb on - strand, within RS_RS18110 at 248.587 kb on - strand, within RS_RS18110 at 248.587 kb on - strand, within RS_RS18110 at 248.922 kb on + strand, within RS_RS18110 at 248.922 kb on + strand, within RS_RS18110 at 248.923 kb on - strand, within RS_RS18110 at 248.923 kb on - strand, within RS_RS18110 at 248.923 kb on - strand, within RS_RS18110 at 249.085 kb on - strand at 249.307 kb on + strand at 249.307 kb on + strand at 249.308 kb on - strand at 249.382 kb on + strand at 249.579 kb on + strand at 249.674 kb on - strand at 249.674 kb on - strand at 250.054 kb on - strand at 250.065 kb on + strand at 250.072 kb on + strand at 250.072 kb on + strand at 250.073 kb on - strand at 250.073 kb on - strand at 250.079 kb on + strand at 250.079 kb on + strand at 250.080 kb on - strand at 250.153 kb on + strand at 250.153 kb on + strand at 250.153 kb on + strand at 250.154 kb on - strand at 250.244 kb on - strand at 250.263 kb on - strand at 250.264 kb on + strand at 250.265 kb on - strand at 250.265 kb on - strand at 250.265 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 246,086 - RS_RS18105 0.69 +1.4 246,145 + RS_RS18105 0.72 -0.4 246,185 - RS_RS18105 0.73 -0.2 246,185 - RS_RS18105 0.73 -0.4 246,202 + RS_RS18105 0.74 +2.4 246,202 + RS_RS18105 0.74 -0.8 246,202 + RS_RS18105 0.74 +1.4 246,203 - RS_RS18105 0.74 -0.9 246,259 + RS_RS18105 0.76 +2.4 246,260 - RS_RS18105 0.76 -3.2 246,439 + RS_RS18105 0.84 +0.8 246,439 + RS_RS18105 0.84 -0.1 246,649 + -0.3 246,649 + +0.9 246,649 + -0.6 246,649 + -1.3 246,650 - +1.2 246,837 - -2.4 246,837 - +0.7 246,837 - +0.8 247,110 + -1.3 247,126 - RS_RS18110 0.10 +2.4 247,126 - RS_RS18110 0.10 +0.8 247,161 + RS_RS18110 0.12 +0.4 247,161 + RS_RS18110 0.12 -1.4 247,162 - RS_RS18110 0.12 +0.1 247,162 - RS_RS18110 0.12 +1.4 247,302 + RS_RS18110 0.18 -0.1 247,302 + RS_RS18110 0.18 -0.2 247,303 - RS_RS18110 0.18 +0.4 247,416 + RS_RS18110 0.22 -1.5 247,428 + RS_RS18110 0.23 +0.8 247,435 - RS_RS18110 0.23 -0.4 247,684 + RS_RS18110 0.33 +1.2 247,685 - RS_RS18110 0.33 +0.2 247,827 + RS_RS18110 0.39 -0.4 247,827 + RS_RS18110 0.39 -0.2 247,828 - RS_RS18110 0.39 +1.4 247,869 + RS_RS18110 0.41 +0.5 247,869 + RS_RS18110 0.41 -0.2 247,881 + RS_RS18110 0.41 -0.3 248,587 - RS_RS18110 0.71 +0.1 248,587 - RS_RS18110 0.71 -1.3 248,587 - RS_RS18110 0.71 -0.9 248,587 - RS_RS18110 0.71 -0.9 248,922 + RS_RS18110 0.84 -1.1 248,922 + RS_RS18110 0.84 -0.8 248,923 - RS_RS18110 0.84 -1.2 248,923 - RS_RS18110 0.84 -0.9 248,923 - RS_RS18110 0.84 -1.6 249,085 - -1.6 249,307 + +2.4 249,307 + +0.2 249,308 - +7.0 249,382 + -0.4 249,579 + -0.7 249,674 - +0.4 249,674 - +0.1 250,054 - +0.1 250,065 + +2.4 250,072 + +0.2 250,072 + -0.2 250,073 - -1.4 250,073 - -0.9 250,079 + +0.1 250,079 + -0.2 250,080 - +1.4 250,153 + -1.1 250,153 + +1.4 250,153 + -1.1 250,154 - +1.4 250,244 - -0.2 250,263 - +0.4 250,264 + -0.4 250,265 - -0.2 250,265 - +0.4 250,265 - -1.7
Or see this region's nucleotide sequence