Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS16610 and RS_RS16615 are separated by 96 nucleotides RS_RS16615 and RS_RS16620 are separated by 89 nucleotides RS_RS16620 and RS_RS16625 are separated by 36 nucleotides RS_RS16625 and RS_RS16630 are separated by 64 nucleotides
RS_RS16610: RS_RS16610 - membrane protein, at 3,577,002 to 3,579,365
_RS16610
RS_RS16615: RS_RS16615 - ATP synthase epsilon chain 1, at 3,579,462 to 3,579,875
_RS16615
RS_RS16620: RS_RS16620 - ATP synthase subunit beta, at 3,579,965 to 3,581,368
_RS16620
RS_RS16625: RS_RS16625 - ATP synthase subunit gamma, at 3,581,405 to 3,582,280
_RS16625
RS_RS16630: RS_RS16630 - ATP synthase subunit alpha, at 3,582,345 to 3,583,886
_RS16630
Position (kb)
3579
3580
3581
3582 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3579.155 kb on - strand at 3579.155 kb on - strand at 3579.155 kb on - strand at 3579.241 kb on + strand at 3579.242 kb on - strand at 3579.389 kb on + strand at 3579.390 kb on - strand at 3579.967 kb on - strand at 3581.382 kb on - strand at 3581.382 kb on - strand at 3581.387 kb on - strand at 3581.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 3,579,155 - -0.4 3,579,155 - -0.9 3,579,155 - -0.9 3,579,241 + -0.0 3,579,242 - -0.1 3,579,389 + +4.5 3,579,390 - +0.1 3,579,967 - -0.1 3,581,382 - -0.8 3,581,382 - +1.9 3,581,387 - +0.5 3,581,387 - -0.8
Or see this region's nucleotide sequence