Strain Fitness in Ralstonia solanacearum GMI1000 around RS_RS03480

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRS_RS03475 and RS_RS03480 are separated by 41 nucleotidesRS_RS03480 and RS_RS03485 overlap by 1 nucleotides RS_RS03475: RS_RS03475 - phosphomannomutase/phosphoglucomutase, at 739,188 to 740,573 _RS03475 RS_RS03480: RS_RS03480 - lipopolysaccharide heptosyltransferase I, at 740,615 to 741,613 _RS03480 RS_RS03485: RS_RS03485 - 3-deoxy-D-manno-octulosonic acid transferase, at 741,613 to 742,929 _RS03485 Position (kb) 740 741 742Strain fitness (log2 ratio) -1 0 1 2at 741.164 kb on + strand, within RS_RS03480

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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741,164 + RS_RS03480 0.55 +2.2

Or see this region's nucleotide sequence