Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS04900 and RS_RS04905 are separated by 7 nucleotides RS_RS04905 and RS_RS04910 are separated by 85 nucleotides
RS_RS04900: RS_RS04900 - molecular chaperone HtpG, at 1,041,349 to 1,043,271
_RS04900
RS_RS04905: RS_RS04905 - DNA-deoxyinosine glycosylase, at 1,043,279 to 1,043,779
_RS04905
RS_RS04910: RS_RS04910 - glutathione S-transferase, at 1,043,865 to 1,044,947
_RS04910
Position (kb) 1043
1044 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 1042.486 kb on + strand, within RS_RS04900 at 1042.486 kb on + strand, within RS_RS04900 at 1042.487 kb on - strand, within RS_RS04900 at 1042.487 kb on - strand, within RS_RS04900 at 1042.487 kb on - strand, within RS_RS04900 at 1042.630 kb on + strand, within RS_RS04900 at 1042.631 kb on - strand, within RS_RS04900 at 1042.631 kb on - strand, within RS_RS04900 at 1042.666 kb on + strand, within RS_RS04900 at 1042.666 kb on + strand, within RS_RS04900 at 1042.666 kb on + strand, within RS_RS04900 at 1042.667 kb on - strand, within RS_RS04900 at 1042.667 kb on - strand, within RS_RS04900 at 1042.670 kb on - strand, within RS_RS04900 at 1043.240 kb on - strand at 1043.393 kb on + strand, within RS_RS04905 at 1043.393 kb on + strand, within RS_RS04905 at 1043.396 kb on + strand, within RS_RS04905 at 1043.396 kb on + strand, within RS_RS04905 at 1043.396 kb on + strand, within RS_RS04905 at 1043.397 kb on - strand, within RS_RS04905 at 1043.397 kb on - strand, within RS_RS04905 at 1043.397 kb on - strand, within RS_RS04905 at 1043.468 kb on + strand, within RS_RS04905 at 1043.983 kb on + strand, within RS_RS04910 at 1043.983 kb on + strand, within RS_RS04910 at 1044.041 kb on - strand, within RS_RS04910 at 1044.056 kb on - strand, within RS_RS04910 at 1044.154 kb on + strand, within RS_RS04910 at 1044.154 kb on + strand, within RS_RS04910 at 1044.154 kb on + strand, within RS_RS04910 at 1044.155 kb on - strand, within RS_RS04910 at 1044.166 kb on + strand, within RS_RS04910 at 1044.167 kb on - strand, within RS_RS04910 at 1044.289 kb on + strand, within RS_RS04910 at 1044.289 kb on + strand, within RS_RS04910 at 1044.290 kb on - strand, within RS_RS04910 at 1044.290 kb on - strand, within RS_RS04910 at 1044.290 kb on - strand, within RS_RS04910 at 1044.454 kb on + strand, within RS_RS04910 at 1044.454 kb on + strand, within RS_RS04910 at 1044.455 kb on - strand, within RS_RS04910 at 1044.475 kb on + strand, within RS_RS04910 at 1044.695 kb on - strand, within RS_RS04910
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,042,486 + RS_RS04900 0.59 -1.3 1,042,486 + RS_RS04900 0.59 +4.7 1,042,487 - RS_RS04900 0.59 +0.4 1,042,487 - RS_RS04900 0.59 +0.2 1,042,487 - RS_RS04900 0.59 -0.2 1,042,630 + RS_RS04900 0.67 -0.5 1,042,631 - RS_RS04900 0.67 -0.0 1,042,631 - RS_RS04900 0.67 -0.1 1,042,666 + RS_RS04900 0.68 +0.6 1,042,666 + RS_RS04900 0.68 +0.3 1,042,666 + RS_RS04900 0.68 -0.9 1,042,667 - RS_RS04900 0.69 -0.1 1,042,667 - RS_RS04900 0.69 -0.5 1,042,670 - RS_RS04900 0.69 -0.1 1,043,240 - -0.1 1,043,393 + RS_RS04905 0.23 -0.8 1,043,393 + RS_RS04905 0.23 -0.5 1,043,396 + RS_RS04905 0.23 -1.3 1,043,396 + RS_RS04905 0.23 +1.5 1,043,396 + RS_RS04905 0.23 -1.7 1,043,397 - RS_RS04905 0.24 +0.6 1,043,397 - RS_RS04905 0.24 +0.2 1,043,397 - RS_RS04905 0.24 -0.1 1,043,468 + RS_RS04905 0.38 -2.9 1,043,983 + RS_RS04910 0.11 -0.1 1,043,983 + RS_RS04910 0.11 -2.1 1,044,041 - RS_RS04910 0.16 -1.1 1,044,056 - RS_RS04910 0.18 +0.7 1,044,154 + RS_RS04910 0.27 +0.3 1,044,154 + RS_RS04910 0.27 +0.5 1,044,154 + RS_RS04910 0.27 +0.5 1,044,155 - RS_RS04910 0.27 -1.0 1,044,166 + RS_RS04910 0.28 +0.1 1,044,167 - RS_RS04910 0.28 +1.5 1,044,289 + RS_RS04910 0.39 -0.3 1,044,289 + RS_RS04910 0.39 -0.0 1,044,290 - RS_RS04910 0.39 +0.6 1,044,290 - RS_RS04910 0.39 +0.9 1,044,290 - RS_RS04910 0.39 -0.7 1,044,454 + RS_RS04910 0.54 +0.5 1,044,454 + RS_RS04910 0.54 +1.7 1,044,455 - RS_RS04910 0.54 -0.1 1,044,475 + RS_RS04910 0.56 +0.3 1,044,695 - RS_RS04910 0.77 -0.5
Or see this region's nucleotide sequence