Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS22640 and RS_RS22645 overlap by 4 nucleotides RS_RS22645 and RS_RS22650 are separated by 43 nucleotides RS_RS22650 and RS_RS22655 are separated by 103 nucleotides RS_RS22655 and RS_RS22660 are separated by 31 nucleotides
RS_RS22640: RS_RS22640 - molybdate ABC transporter permease subunit, at 1,444,539 to 1,445,225
_RS22640
RS_RS22645: RS_RS22645 - ABC transporter ATP-binding protein, at 1,445,222 to 1,445,959
_RS22645
RS_RS22650: RS_RS22650 - LysR family transcriptional regulator, at 1,446,003 to 1,446,899
_RS22650
RS_RS22655: RS_RS22655 - NADPH-dependent F420 reductase, at 1,447,003 to 1,447,629
_RS22655
RS_RS22660: RS_RS22660 - alpha/beta hydrolase, at 1,447,661 to 1,448,752
_RS22660
Position (kb) 1446
1447 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1445.085 kb on + strand, within RS_RS22640 at 1445.085 kb on + strand, within RS_RS22640 at 1445.085 kb on + strand, within RS_RS22640 at 1445.086 kb on - strand, within RS_RS22640 at 1445.321 kb on + strand, within RS_RS22645 at 1445.321 kb on + strand, within RS_RS22645 at 1445.487 kb on - strand, within RS_RS22645 at 1445.487 kb on - strand, within RS_RS22645 at 1445.631 kb on - strand, within RS_RS22645 at 1445.925 kb on - strand at 1446.090 kb on + strand at 1446.090 kb on + strand at 1446.319 kb on + strand, within RS_RS22650 at 1446.484 kb on + strand, within RS_RS22650 at 1446.484 kb on + strand, within RS_RS22650 at 1446.485 kb on - strand, within RS_RS22650 at 1446.559 kb on + strand, within RS_RS22650 at 1446.559 kb on + strand, within RS_RS22650 at 1446.559 kb on + strand, within RS_RS22650 at 1446.560 kb on - strand, within RS_RS22650 at 1446.560 kb on - strand, within RS_RS22650 at 1446.703 kb on + strand, within RS_RS22650 at 1446.703 kb on + strand, within RS_RS22650 at 1446.704 kb on - strand, within RS_RS22650 at 1446.704 kb on - strand, within RS_RS22650 at 1446.907 kb on - strand at 1447.190 kb on + strand, within RS_RS22655 at 1447.204 kb on + strand, within RS_RS22655 at 1447.619 kb on + strand at 1447.620 kb on - strand at 1447.653 kb on - strand at 1447.653 kb on - strand at 1447.829 kb on - strand, within RS_RS22660 at 1447.862 kb on + strand, within RS_RS22660 at 1447.863 kb on - strand, within RS_RS22660
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 1,445,085 + RS_RS22640 0.79 +1.6 1,445,085 + RS_RS22640 0.79 +0.4 1,445,085 + RS_RS22640 0.79 -1.7 1,445,086 - RS_RS22640 0.80 -1.0 1,445,321 + RS_RS22645 0.13 -0.0 1,445,321 + RS_RS22645 0.13 +0.4 1,445,487 - RS_RS22645 0.36 +0.4 1,445,487 - RS_RS22645 0.36 -0.6 1,445,631 - RS_RS22645 0.55 +1.0 1,445,925 - +1.3 1,446,090 + -1.5 1,446,090 + -1.6 1,446,319 + RS_RS22650 0.35 -0.8 1,446,484 + RS_RS22650 0.54 +1.4 1,446,484 + RS_RS22650 0.54 +1.0 1,446,485 - RS_RS22650 0.54 -1.0 1,446,559 + RS_RS22650 0.62 -0.2 1,446,559 + RS_RS22650 0.62 +0.3 1,446,559 + RS_RS22650 0.62 -1.9 1,446,560 - RS_RS22650 0.62 -0.2 1,446,560 - RS_RS22650 0.62 +2.0 1,446,703 + RS_RS22650 0.78 -0.9 1,446,703 + RS_RS22650 0.78 +0.3 1,446,704 - RS_RS22650 0.78 -0.6 1,446,704 - RS_RS22650 0.78 +0.1 1,446,907 - +0.4 1,447,190 + RS_RS22655 0.30 +1.4 1,447,204 + RS_RS22655 0.32 -0.0 1,447,619 + +0.2 1,447,620 - +0.1 1,447,653 - -0.1 1,447,653 - +0.4 1,447,829 - RS_RS22660 0.15 -1.2 1,447,862 + RS_RS22660 0.18 -0.1 1,447,863 - RS_RS22660 0.18 +0.1
Or see this region's nucleotide sequence