Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RS_RS10735 and RS_RS10740 overlap by 4 nucleotides RS_RS10740 and RS_RS10745 overlap by 4 nucleotides RS_RS10745 and RS_RS10750 are separated by 102 nucleotides
RS_RS10735: RS_RS10735 - HAD family phosphatase, at 2,323,951 to 2,324,649
_RS10735
RS_RS10740: RS_RS10740 - carbohydrate ABC transporter permease, at 2,324,646 to 2,325,506
_RS10740
RS_RS10745: RS_RS10745 - sugar ABC transporter permease, at 2,325,503 to 2,326,444
_RS10745
RS_RS10750: RS_RS10750 - sugar ABC transporter substrate-binding protein, at 2,326,547 to 2,327,872
_RS10750
Position (kb)
2325
2326
2327 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2324.780 kb on - strand, within RS_RS10740 at 2324.780 kb on - strand, within RS_RS10740 at 2324.917 kb on + strand, within RS_RS10740 at 2324.992 kb on + strand, within RS_RS10740 at 2325.094 kb on + strand, within RS_RS10740 at 2325.094 kb on + strand, within RS_RS10740 at 2325.341 kb on - strand, within RS_RS10740 at 2325.513 kb on + strand at 2325.639 kb on + strand, within RS_RS10745 at 2325.640 kb on - strand, within RS_RS10745 at 2325.696 kb on + strand, within RS_RS10745 at 2325.696 kb on + strand, within RS_RS10745 at 2325.783 kb on + strand, within RS_RS10745 at 2325.993 kb on + strand, within RS_RS10745 at 2326.106 kb on + strand, within RS_RS10745 at 2326.222 kb on - strand, within RS_RS10745 at 2326.269 kb on + strand, within RS_RS10745 at 2326.270 kb on - strand, within RS_RS10745 at 2326.698 kb on + strand, within RS_RS10750 at 2326.699 kb on - strand, within RS_RS10750 at 2326.699 kb on - strand, within RS_RS10750 at 2326.699 kb on - strand, within RS_RS10750 at 2326.713 kb on + strand, within RS_RS10750 at 2326.714 kb on - strand, within RS_RS10750 at 2326.800 kb on + strand, within RS_RS10750 at 2326.882 kb on - strand, within RS_RS10750 at 2327.053 kb on - strand, within RS_RS10750 at 2327.182 kb on - strand, within RS_RS10750 at 2327.280 kb on + strand, within RS_RS10750 at 2327.280 kb on + strand, within RS_RS10750 at 2327.280 kb on + strand, within RS_RS10750 at 2327.281 kb on - strand, within RS_RS10750
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,324,780 - RS_RS10740 0.16 +0.0 2,324,780 - RS_RS10740 0.16 -0.3 2,324,917 + RS_RS10740 0.31 +0.1 2,324,992 + RS_RS10740 0.40 -1.0 2,325,094 + RS_RS10740 0.52 -0.2 2,325,094 + RS_RS10740 0.52 -0.9 2,325,341 - RS_RS10740 0.81 -1.5 2,325,513 + +0.1 2,325,639 + RS_RS10745 0.14 -0.6 2,325,640 - RS_RS10745 0.15 -0.1 2,325,696 + RS_RS10745 0.20 +0.4 2,325,696 + RS_RS10745 0.20 -0.0 2,325,783 + RS_RS10745 0.30 +0.2 2,325,993 + RS_RS10745 0.52 -0.7 2,326,106 + RS_RS10745 0.64 -0.0 2,326,222 - RS_RS10745 0.76 +0.5 2,326,269 + RS_RS10745 0.81 +0.6 2,326,270 - RS_RS10745 0.81 +0.0 2,326,698 + RS_RS10750 0.11 +0.3 2,326,699 - RS_RS10750 0.11 -0.6 2,326,699 - RS_RS10750 0.11 -1.7 2,326,699 - RS_RS10750 0.11 +1.3 2,326,713 + RS_RS10750 0.13 -0.1 2,326,714 - RS_RS10750 0.13 -1.3 2,326,800 + RS_RS10750 0.19 +0.3 2,326,882 - RS_RS10750 0.25 -0.1 2,327,053 - RS_RS10750 0.38 +0.2 2,327,182 - RS_RS10750 0.48 -0.3 2,327,280 + RS_RS10750 0.55 +0.3 2,327,280 + RS_RS10750 0.55 -0.6 2,327,280 + RS_RS10750 0.55 +3.9 2,327,281 - RS_RS10750 0.55 -0.1
Or see this region's nucleotide sequence