Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5093

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
6,043,959	+		Psyr_5092	0.63	+0.4
6,043,960	-		Psyr_5092	0.63	+0.8
6,043,960	-		Psyr_5092	0.63	+0.9
6,043,960	-		Psyr_5092	0.63	-0.4
6,043,967	+		Psyr_5092	0.63	-0.3
6,044,104	-		Psyr_5092	0.71	-0.4
6,044,119	-		Psyr_5092	0.71	+0.4
6,044,195	+		Psyr_5092	0.75	+0.1
6,044,195	+		Psyr_5092	0.75	-0.9
6,044,195	+		Psyr_5092	0.75	-1.8
6,044,195	+		Psyr_5092	0.75	+1.7
6,044,195	+		Psyr_5092	0.75	+0.0
6,044,195	+		Psyr_5092	0.75	+0.2
6,044,195	+		Psyr_5092	0.75	+0.8
6,044,195	+		Psyr_5092	0.75	+2.1
6,044,195	+		Psyr_5092	0.75	+2.6
6,044,196	-		Psyr_5092	0.75	+1.2
6,044,196	-		Psyr_5092	0.75	+0.5
6,044,196	-		Psyr_5092	0.75	+0.9
6,044,196	-		Psyr_5092	0.75	-0.6
6,044,196	-		Psyr_5092	0.75	+0.1
6,044,289	+		Psyr_5092	0.80	+0.3
6,044,290	-		Psyr_5092	0.80	-0.4
6,044,322	+		Psyr_5092	0.82	-0.2
6,044,323	-		Psyr_5092	0.82	-1.3
6,044,472	+		Psyr_5092	0.90	+0.5
6,044,472	+		Psyr_5092	0.90	+0.1
6,044,472	+		Psyr_5092	0.90	-2.1
6,044,472	+		Psyr_5092	0.90	-1.4
6,044,472	+		Psyr_5092	0.90	-0.9
6,044,472	+		Psyr_5092	0.90	-0.1
6,044,472	+		Psyr_5092	0.90	-0.2
6,044,472	+		Psyr_5092	0.90	-0.0
6,044,473	-		Psyr_5092	0.90	-0.7
6,044,473	-		Psyr_5092	0.90	+0.0
6,044,473	-		Psyr_5092	0.90	+1.4
6,044,473	-		Psyr_5092	0.90	-0.3
6,044,473	-		Psyr_5092	0.90	-0.9
6,044,473	-		Psyr_5092	0.90	-0.8
6,044,473	-		Psyr_5092	0.90	-0.7
6,044,473	-		Psyr_5092	0.90	+1.0
6,044,524	+				-0.2
6,044,548	-				+0.2
6,044,548	-				+0.3
6,044,668	+				-1.8
6,044,669	-				+0.4
6,044,723	+				-3.1
6,045,056	+		Psyr_5093	0.10	-0.2
6,045,479	+		Psyr_5093	0.31	+1.1
6,045,491	+		Psyr_5093	0.32	-0.3
6,045,492	-		Psyr_5093	0.32	-0.5
6,045,492	-		Psyr_5093	0.32	+0.1
6,045,654	+		Psyr_5093	0.40	-0.0
6,045,654	+		Psyr_5093	0.40	-0.3
6,045,654	+		Psyr_5093	0.40	+0.0
6,045,654	+		Psyr_5093	0.40	+1.8
6,045,654	+		Psyr_5093	0.40	-1.3
6,045,654	+		Psyr_5093	0.40	-0.9
6,045,654	+		Psyr_5093	0.40	+0.5
6,045,654	+		Psyr_5093	0.40	-0.5
6,045,654	+		Psyr_5093	0.40	+1.7
6,045,655	-		Psyr_5093	0.40	-0.4
6,045,655	-		Psyr_5093	0.40	-1.0
6,045,655	-		Psyr_5093	0.40	+0.5
6,045,655	-		Psyr_5093	0.40	-0.6
6,045,670	+		Psyr_5093	0.40	-0.2
6,045,671	-		Psyr_5093	0.40	-0.7
6,045,671	-		Psyr_5093	0.40	+0.3
6,045,850	+		Psyr_5093	0.49	-0.1
6,045,850	+		Psyr_5093	0.49	-0.2
6,045,851	-		Psyr_5093	0.49	+0.1
6,045,851	-		Psyr_5093	0.49	-0.6
6,045,868	+		Psyr_5093	0.50	-0.3
6,045,868	+		Psyr_5093	0.50	+0.4
6,045,869	-		Psyr_5093	0.50	+1.0
6,045,869	-		Psyr_5093	0.50	+0.4
6,045,938	-		Psyr_5093	0.54	-0.5
6,045,991	+		Psyr_5093	0.56	+0.4
6,045,991	+		Psyr_5093	0.56	+0.6
6,045,992	-		Psyr_5093	0.56	+0.6
6,045,992	-		Psyr_5093	0.56	-0.4
6,045,992	-		Psyr_5093	0.56	+0.0
6,045,992	-		Psyr_5093	0.56	+1.6
6,045,992	-		Psyr_5093	0.56	+1.9
6,046,065	+		Psyr_5093	0.60	+1.0
6,046,065	+		Psyr_5093	0.60	-1.5
6,046,065	+		Psyr_5093	0.60	+0.8
6,046,065	+		Psyr_5093	0.60	-0.4
6,046,066	-		Psyr_5093	0.60	-0.7
6,046,066	-		Psyr_5093	0.60	-0.4
6,046,066	-		Psyr_5093	0.60	-0.2
6,046,066	-		Psyr_5093	0.60	+1.3
6,046,245	+		Psyr_5093	0.69	+0.4
6,046,245	+		Psyr_5093	0.69	-1.2
6,046,323	-		Psyr_5093	0.73	+0.4
6,046,323	-		Psyr_5093	0.73	-0.4
6,046,399	+		Psyr_5093	0.76	+0.9
6,046,399	+		Psyr_5093	0.76	-1.6
6,046,399	+		Psyr_5093	0.76	-0.2
6,046,399	+		Psyr_5093	0.76	+0.8
6,046,399	+		Psyr_5093	0.76	-0.5
6,046,399	+		Psyr_5093	0.76	+0.1
6,046,399	+		Psyr_5093	0.76	+1.0
6,046,399	+		Psyr_5093	0.76	+0.2
6,046,399	+		Psyr_5093	0.76	-2.5
6,046,399	+		Psyr_5093	0.76	+0.4
6,046,400	-		Psyr_5093	0.76	+0.5
6,046,400	-		Psyr_5093	0.76	-1.6
6,046,400	-		Psyr_5093	0.76	-0.9
6,046,400	-		Psyr_5093	0.76	+0.8
6,046,400	-		Psyr_5093	0.76	-1.6
6,046,400	-		Psyr_5093	0.76	-0.0
6,046,400	-		Psyr_5093	0.76	-0.5
6,046,402	+		Psyr_5093	0.76	-0.2
6,046,402	+		Psyr_5093	0.76	+0.2
6,046,402	+		Psyr_5093	0.76	-0.8
6,046,402	+		Psyr_5093	0.76	-0.7
6,046,402	+		Psyr_5093	0.76	-0.6
6,046,402	+		Psyr_5093	0.76	+0.4
6,046,402	+		Psyr_5093	0.76	+0.2
6,046,402	+		Psyr_5093	0.76	+0.2
6,046,402	+		Psyr_5093	0.76	-0.3
6,046,402	+		Psyr_5093	0.76	-0.2
6,046,402	+		Psyr_5093	0.76	-1.6
6,046,403	-		Psyr_5093	0.76	-1.2
6,046,403	-		Psyr_5093	0.76	-0.0
6,046,403	-		Psyr_5093	0.76	-0.1
6,046,403	-		Psyr_5093	0.76	-0.6
6,046,403	-		Psyr_5093	0.76	-1.9
6,046,403	-		Psyr_5093	0.76	+0.2
6,046,403	-		Psyr_5093	0.76	-0.2
6,046,403	-		Psyr_5093	0.76	+0.6
6,046,403	-		Psyr_5093	0.76	-0.4
6,046,403	-		Psyr_5093	0.76	-0.2
6,046,403	-		Psyr_5093	0.76	-0.6
6,046,406	+		Psyr_5093	0.77	-0.5
6,046,407	-		Psyr_5093	0.77	-1.4
6,046,478	+		Psyr_5093	0.80	-0.5
6,046,479	-		Psyr_5093	0.80	+0.3
6,046,574	+		Psyr_5093	0.85	-1.1
6,046,575	-		Psyr_5093	0.85	+0.3
6,046,575	-		Psyr_5093	0.85	-1.5
6,046,645	-		Psyr_5093	0.88	-0.2
6,046,645	-		Psyr_5093	0.88	-0.3
6,046,708	+				-0.2
6,046,708	+				-0.8
6,046,812	+				+0.0
6,046,812	+				-0.4
6,046,813	-				-0.3
6,046,855	+				+1.0
6,046,855	+				+0.0
6,046,855	+				+1.0
6,046,855	+				-0.3
6,046,855	+				-1.0
6,046,855	+				+0.1
6,046,855	+				+0.8
6,046,855	+				+0.4
6,046,856	-				-0.2
6,046,856	-				+0.2
6,046,859	+				-0.9
6,046,859	+				-0.6
6,046,860	-				+0.3
6,046,880	+				-0.2
6,046,880	+				+0.8
6,046,881	-				-0.5
6,046,894	+				-0.0
6,046,894	+				-1.1
6,046,898	+				-0.6
6,046,899	-				-2.4
6,046,945	+				+0.4
6,046,945	+				+0.7
6,046,948	+				-1.1
6,046,948	+				+0.3
6,046,949	-				-0.6
6,046,949	-				+0.4
6,046,959	+				+0.9
6,046,959	+				-0.7
6,046,959	+				+1.1
6,046,959	+				-1.3
6,046,959	+				-0.0
6,046,960	-				+0.5
6,046,960	-				-0.6
6,047,048	+				-0.5
6,047,048	+				+1.2
6,047,048	+				-0.3
6,047,048	+				-0.8
6,047,049	-				+0.1
6,047,049	-				+0.2
6,047,051	-				-0.3
6,047,051	-				+0.9
6,047,051	-				-1.0
6,047,068	-				-0.8
6,047,140	+				+0.9
6,047,140	+				+1.1
6,047,140	+				+1.5
6,047,140	+				+0.8
6,047,141	-				-0.9
6,047,141	-				-0.3
6,047,141	-				+0.6
6,047,141	-				-0.2
6,047,141	-				-2.5
6,047,141	-				-0.7
6,047,141	-				+1.6
6,047,141	-				-0.2
6,047,173	-				+0.1
6,047,226	-				+1.2
6,047,226	-				-0.5
6,047,226	-				-0.4
6,047,245	+				-0.0
6,047,245	+				+0.0
6,047,245	+				-0.4
6,047,246	-				+0.4
6,047,276	+				-0.1
6,047,276	+				+0.1
6,047,276	+				-0.4
6,047,276	+				-0.4
6,047,277	-				-0.5
6,047,277	-				+0.7
6,047,277	-				+2.4
6,047,277	-				-0.1
6,047,277	-				-0.4
6,047,286	-				+0.2
6,047,389	+		Psyr_5094	0.36	+0.6
6,047,389	+		Psyr_5094	0.36	+0.7
6,047,389	+		Psyr_5094	0.36	+0.1
6,047,390	-		Psyr_5094	0.37	+0.5
6,047,390	-		Psyr_5094	0.37	-1.6
6,047,390	-		Psyr_5094	0.37	+0.8
6,047,445	-		Psyr_5094	0.61	-1.0
6,047,466	+		Psyr_5094	0.71	+0.1
6,047,466	+		Psyr_5094	0.71	+0.0
6,047,466	+		Psyr_5094	0.71	-0.5
6,047,466	+		Psyr_5094	0.71	+1.1
6,047,466	+		Psyr_5094	0.71	-0.3
6,047,466	+		Psyr_5094	0.71	+0.1
6,047,466	+		Psyr_5094	0.71	-0.9
6,047,466	+		Psyr_5094	0.71	-0.5
6,047,466	+		Psyr_5094	0.71	-0.1
6,047,467	-		Psyr_5094	0.71	+0.5
6,047,467	-		Psyr_5094	0.71	-0.9
6,047,467	-		Psyr_5094	0.71	-0.4
6,047,467	-		Psyr_5094	0.71	-0.1
6,047,467	-		Psyr_5094	0.71	-0.9
6,047,467	-		Psyr_5094	0.71	+0.5
6,047,467	-		Psyr_5094	0.71	-1.2
6,047,467	-		Psyr_5094	0.71	+0.5
6,047,470	+		Psyr_5094	0.72	-1.3
6,047,470	+		Psyr_5094	0.72	+0.6
6,047,470	+		Psyr_5094	0.72	+0.7
6,047,470	+		Psyr_5094	0.72	+0.8
6,047,470	+		Psyr_5094	0.72	+0.2
6,047,470	+		Psyr_5094	0.72	+1.6
6,047,471	-		Psyr_5094	0.73	-0.3
6,047,471	-		Psyr_5094	0.73	+0.7
6,047,471	-		Psyr_5094	0.73	+1.4
6,047,471	-		Psyr_5094	0.73	+0.4
6,047,471	-		Psyr_5094	0.73	+1.1
6,047,471	-		Psyr_5094	0.73	+0.3
6,047,482	+		Psyr_5094	0.78	-0.2
6,047,482	+		Psyr_5094	0.78	-0.8
6,047,482	+		Psyr_5094	0.78	-0.3
6,047,483	-		Psyr_5094	0.78	+0.2
6,047,483	-		Psyr_5094	0.78	-0.0
6,047,483	-		Psyr_5094	0.78	-0.2
6,047,483	-		Psyr_5094	0.78	-0.3
6,047,483	-		Psyr_5094	0.78	-0.2
6,047,593	+				-1.9
6,047,594	-				+0.1
6,047,639	+				+0.9
6,047,639	+				+0.1
6,047,639	+				-1.5
6,047,640	-				+0.4
6,047,640	-				-0.6
6,047,640	-				-0.1
6,047,640	-				+0.4
6,047,640	-				+1.2
6,047,640	-				-0.9
6,047,640	-				-1.1
6,047,648	-				+2.6
6,047,686	+				-0.1
6,047,689	-				+0.3
6,047,748	+				-1.4
6,047,749	-				-0.2
6,047,789	-				+1.5
6,047,850	+				+0.8