Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4864

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
5,771,504	-		Psyr_4863	0.22	+0.1
5,771,504	-		Psyr_4863	0.22	+0.5
5,771,507	+		Psyr_4863	0.22	-0.1
5,771,507	+		Psyr_4863	0.22	-0.4
5,771,507	+		Psyr_4863	0.22	+1.4
5,771,507	+		Psyr_4863	0.22	-0.3
5,771,507	+		Psyr_4863	0.22	+0.2
5,771,508	-		Psyr_4863	0.22	+0.0
5,771,508	-		Psyr_4863	0.22	+0.3
5,771,508	-		Psyr_4863	0.22	-0.0
5,771,508	-		Psyr_4863	0.22	+0.1
5,771,508	-		Psyr_4863	0.22	-0.6
5,771,551	+		Psyr_4863	0.26	-0.0
5,771,551	+		Psyr_4863	0.26	-1.6
5,771,551	+		Psyr_4863	0.26	-1.0
5,771,551	+		Psyr_4863	0.26	+1.9
5,771,551	+		Psyr_4863	0.26	+0.1
5,771,551	+		Psyr_4863	0.26	+0.1
5,771,551	+		Psyr_4863	0.26	+0.1
5,771,551	+		Psyr_4863	0.26	+0.1
5,771,551	+		Psyr_4863	0.26	+0.8
5,771,551	+		Psyr_4863	0.26	+0.1
5,771,551	+		Psyr_4863	0.26	-0.5
5,771,551	+		Psyr_4863	0.26	+0.2
5,771,551	+		Psyr_4863	0.26	+0.9
5,771,552	-		Psyr_4863	0.26	-1.4
5,771,552	-		Psyr_4863	0.26	-2.0
5,771,552	-		Psyr_4863	0.26	+0.4
5,771,552	-		Psyr_4863	0.26	-0.8
5,771,552	-		Psyr_4863	0.26	+0.3
5,771,552	-		Psyr_4863	0.26	+0.7
5,771,552	-		Psyr_4863	0.26	-1.2
5,771,552	-		Psyr_4863	0.26	-1.4
5,771,552	-		Psyr_4863	0.26	+0.3
5,771,552	-		Psyr_4863	0.26	+0.4
5,771,552	-		Psyr_4863	0.26	-0.3
5,771,552	-		Psyr_4863	0.26	+1.4
5,771,552	-		Psyr_4863	0.26	+0.4
5,771,552	-		Psyr_4863	0.26	-0.2
5,771,552	-		Psyr_4863	0.26	+0.3
5,771,552	-		Psyr_4863	0.26	-0.3
5,771,552	-		Psyr_4863	0.26	-0.4
5,771,552	-		Psyr_4863	0.26	+0.6
5,771,552	-		Psyr_4863	0.26	+0.4
5,771,552	-		Psyr_4863	0.26	+1.2
5,771,552	-		Psyr_4863	0.26	+0.6
5,771,552	-		Psyr_4863	0.26	+0.9
5,771,555	+		Psyr_4863	0.26	-0.3
5,771,555	+		Psyr_4863	0.26	+0.2
5,771,555	+		Psyr_4863	0.26	+0.3
5,771,555	+		Psyr_4863	0.26	-0.6
5,771,556	-		Psyr_4863	0.26	-0.9
5,771,556	-		Psyr_4863	0.26	+0.7
5,771,556	-		Psyr_4863	0.26	-0.4
5,771,556	-		Psyr_4863	0.26	+0.1
5,771,677	+		Psyr_4863	0.37	-0.3
5,771,677	+		Psyr_4863	0.37	-0.5
5,771,677	+		Psyr_4863	0.37	+0.6
5,771,677	+		Psyr_4863	0.37	-1.8
5,771,677	+		Psyr_4863	0.37	-2.6
5,771,678	-		Psyr_4863	0.37	-0.1
5,771,678	-		Psyr_4863	0.37	+1.1
5,771,678	-		Psyr_4863	0.37	-0.1
5,771,678	-		Psyr_4863	0.37	-0.2
5,771,678	-		Psyr_4863	0.37	+0.1
5,771,678	-		Psyr_4863	0.37	-1.3
5,771,965	+		Psyr_4863	0.62	+3.5
5,772,160	+		Psyr_4863	0.79	+0.4
5,772,160	+		Psyr_4863	0.79	-0.4
5,772,161	-		Psyr_4863	0.79	+0.3
5,772,161	-		Psyr_4863	0.79	-0.6
5,772,161	-		Psyr_4863	0.79	-0.7
5,772,161	-		Psyr_4863	0.79	+0.8
5,772,377	-				-0.9
5,772,418	+				+0.7
5,772,419	-				-1.2
5,772,627	-		Psyr_4864	0.16	-0.8
5,772,674	+		Psyr_4864	0.20	-1.6
5,772,674	+		Psyr_4864	0.20	+0.2
5,772,674	+		Psyr_4864	0.20	-0.0
5,772,674	+		Psyr_4864	0.20	-0.1
5,772,674	+		Psyr_4864	0.20	-1.4
5,772,674	+		Psyr_4864	0.20	+1.0
5,772,674	+		Psyr_4864	0.20	-0.6
5,772,674	+		Psyr_4864	0.20	-0.8
5,772,674	+		Psyr_4864	0.20	-0.2
5,772,674	+		Psyr_4864	0.20	+0.3
5,772,674	+		Psyr_4864	0.20	-0.7
5,772,674	+		Psyr_4864	0.20	+1.2
5,772,674	+		Psyr_4864	0.20	-0.1
5,772,674	+		Psyr_4864	0.20	-0.5
5,772,675	-		Psyr_4864	0.20	+0.2
5,772,675	-		Psyr_4864	0.20	+1.0
5,772,675	-		Psyr_4864	0.20	+0.5
5,772,675	-		Psyr_4864	0.20	-1.1
5,772,675	-		Psyr_4864	0.20	+0.6
5,772,675	-		Psyr_4864	0.20	-0.2
5,772,675	-		Psyr_4864	0.20	+0.9
5,772,675	-		Psyr_4864	0.20	-0.2
5,772,675	-		Psyr_4864	0.20	-0.8
5,772,675	-		Psyr_4864	0.20	+0.1
5,772,675	-		Psyr_4864	0.20	-0.2
5,772,675	-		Psyr_4864	0.20	+0.1
5,772,675	-		Psyr_4864	0.20	-0.4
5,772,881	+		Psyr_4864	0.39	+0.4
5,772,881	+		Psyr_4864	0.39	+0.8
5,772,881	+		Psyr_4864	0.39	+0.4
5,772,881	+		Psyr_4864	0.39	-0.2
5,772,881	+		Psyr_4864	0.39	-0.6
5,772,881	+		Psyr_4864	0.39	-0.2
5,772,882	-		Psyr_4864	0.39	+1.0
5,772,882	-		Psyr_4864	0.39	+2.3
5,772,882	-		Psyr_4864	0.39	-0.1
5,772,882	-		Psyr_4864	0.39	-0.3
5,772,882	-		Psyr_4864	0.39	-0.8
5,772,882	-		Psyr_4864	0.39	-1.1
5,772,899	+		Psyr_4864	0.41	+1.6
5,772,899	+		Psyr_4864	0.41	-0.8
5,772,899	+		Psyr_4864	0.41	+0.0
5,772,900	-		Psyr_4864	0.41	-0.7
5,772,900	-		Psyr_4864	0.41	+0.4
5,772,900	-		Psyr_4864	0.41	-0.6
5,772,908	+		Psyr_4864	0.41	-1.0
5,772,908	+		Psyr_4864	0.41	-1.3
5,772,909	-		Psyr_4864	0.42	-0.3
5,772,909	-		Psyr_4864	0.42	-1.5
5,772,909	-		Psyr_4864	0.42	-0.3
5,772,909	-		Psyr_4864	0.42	+0.1
5,772,948	-		Psyr_4864	0.45	-0.3
5,772,948	-		Psyr_4864	0.45	-1.5
5,772,986	+		Psyr_4864	0.49	-0.2
5,772,986	+		Psyr_4864	0.49	-0.1
5,772,986	+		Psyr_4864	0.49	+0.5
5,772,986	+		Psyr_4864	0.49	-1.5
5,772,986	+		Psyr_4864	0.49	+0.0
5,772,987	-		Psyr_4864	0.49	-1.1
5,772,987	-		Psyr_4864	0.49	+0.1
5,772,987	-		Psyr_4864	0.49	-0.9
5,772,987	-		Psyr_4864	0.49	+1.2
5,772,987	-		Psyr_4864	0.49	+0.9
5,772,987	-		Psyr_4864	0.49	-2.0
5,772,987	-		Psyr_4864	0.49	-1.4
5,773,034	-		Psyr_4864	0.53	-0.5
5,773,176	-		Psyr_4864	0.66	+0.1
5,773,235	+		Psyr_4864	0.71	-1.8
5,773,235	+		Psyr_4864	0.71	-1.1
5,773,235	+		Psyr_4864	0.71	+1.0
5,773,235	+		Psyr_4864	0.71	+0.1
5,773,236	-		Psyr_4864	0.71	+1.0
5,773,236	-		Psyr_4864	0.71	-0.9
5,773,236	-		Psyr_4864	0.71	-0.3
5,773,385	+		Psyr_4864	0.85	-2.2
5,773,386	-		Psyr_4864	0.85	-1.6
5,773,386	-		Psyr_4864	0.85	+1.7
5,773,386	-		Psyr_4864	0.85	-1.0
5,773,442	+				+0.2
5,773,442	+				-0.6
5,773,442	+				-0.0
5,773,442	+				+0.0
5,773,443	-				-0.7
5,773,457	+				-0.2
5,773,457	+				+0.2
5,773,457	+				+0.8
5,773,457	+				-0.8
5,773,457	+				-1.5
5,773,457	+				+0.8
5,773,457	+				-0.3
5,773,457	+				+0.6
5,773,457	+				-0.2
5,773,457	+				+0.3
5,773,457	+				-0.2
5,773,457	+				+0.6
5,773,458	-				-0.2
5,773,458	-				-0.1
5,773,458	-				+1.0
5,773,458	-				+0.9
5,773,458	-				-0.7
5,773,458	-				-0.1
5,773,458	-				-1.5
5,773,458	-				-0.2
5,773,458	-				-0.2
5,773,458	-				+1.2
5,773,458	-				+0.1
5,773,458	-				+0.4
5,773,461	+				+1.0
5,773,461	+				+0.7
5,773,461	+				+0.7
5,773,461	+				-0.5
5,773,461	+				-0.4
5,773,461	+				-1.3
5,773,461	+				-0.6
5,773,461	+				+0.5
5,773,461	+				-0.2
5,773,461	+				+0.9
5,773,461	+				-1.2
5,773,461	+				+1.4
5,773,461	+				-1.1
5,773,462	-				-1.6
5,773,462	-				-1.3
5,773,462	-				+0.3
5,773,462	-				-0.5
5,773,462	-				-0.3
5,773,462	-				+0.4
5,773,462	-				+0.0
5,773,462	-				-0.4
5,773,462	-				+0.0
5,773,462	-				+0.3
5,773,542	+				+1.9
5,773,542	+				-0.5
5,773,543	-				+0.6
5,773,563	+				+0.1
5,773,564	-				+1.2
5,773,564	-				+0.0
5,773,619	+				+1.1
5,773,620	-				-1.4
5,773,620	-				-0.3
5,773,620	-				-1.2
5,773,620	-				+1.9
5,773,626	+				-0.3
5,773,627	-				+1.0
5,773,627	-				-1.3
5,773,627	-				-0.7
5,773,657	-				+1.4
5,773,721	+				+0.6
5,773,721	+				-1.1
5,773,721	+				-0.3
5,773,722	-				+0.8
5,773,734	+				+0.4
5,773,734	+				-0.2
5,773,734	+				+0.4
5,773,735	-				-2.0
5,773,735	-				+1.4
5,773,735	-				-0.0
5,773,796	+				-0.2
5,773,796	+				+0.6
5,773,796	+				-2.0
5,773,797	-				+0.0
5,773,797	-				+1.0
5,773,797	-				-0.2
5,773,797	-				+1.0
5,773,955	+		Psyr_4865	0.21	-0.1
5,773,955	+		Psyr_4865	0.21	+2.2
5,773,955	+		Psyr_4865	0.21	+0.0
5,773,956	-		Psyr_4865	0.21	-0.4
5,773,956	-		Psyr_4865	0.21	+1.2
5,773,956	-		Psyr_4865	0.21	+0.1
5,773,956	-		Psyr_4865	0.21	-0.8
5,774,003	+		Psyr_4865	0.26	-1.4
5,774,003	+		Psyr_4865	0.26	-1.2
5,774,003	+		Psyr_4865	0.26	-0.6
5,774,003	+		Psyr_4865	0.26	+0.3
5,774,003	+		Psyr_4865	0.26	+0.4
5,774,003	+		Psyr_4865	0.26	-0.8
5,774,003	+		Psyr_4865	0.26	-0.3
5,774,004	-		Psyr_4865	0.26	+0.8
5,774,004	-		Psyr_4865	0.26	-0.5
5,774,004	-		Psyr_4865	0.26	-1.6
5,774,004	-		Psyr_4865	0.26	-0.6
5,774,004	-		Psyr_4865	0.26	+1.4
5,774,036	+		Psyr_4865	0.29	-0.3
5,774,037	-		Psyr_4865	0.29	-0.0
5,774,037	-		Psyr_4865	0.29	-1.6
5,774,087	+		Psyr_4865	0.33	-0.7
5,774,087	+		Psyr_4865	0.33	-0.3
5,774,087	+		Psyr_4865	0.33	-1.2
5,774,087	+		Psyr_4865	0.33	+0.4
5,774,087	+		Psyr_4865	0.33	+1.4
5,774,088	-		Psyr_4865	0.34	-0.3
5,774,088	-		Psyr_4865	0.34	+0.6
5,774,088	-		Psyr_4865	0.34	+0.8
5,774,088	-		Psyr_4865	0.34	-0.7
5,774,091	+		Psyr_4865	0.34	-1.2
5,774,092	-		Psyr_4865	0.34	-1.0
5,774,092	-		Psyr_4865	0.34	-0.4
5,774,147	+		Psyr_4865	0.39	-1.7
5,774,147	+		Psyr_4865	0.39	+2.0
5,774,147	+		Psyr_4865	0.39	-0.4
5,774,147	+		Psyr_4865	0.39	-1.3
5,774,147	+		Psyr_4865	0.39	+0.0
5,774,147	+		Psyr_4865	0.39	+0.9
5,774,147	+		Psyr_4865	0.39	+0.7
5,774,147	+		Psyr_4865	0.39	-0.3
5,774,147	+		Psyr_4865	0.39	+0.4
5,774,147	+		Psyr_4865	0.39	+0.9
5,774,148	-		Psyr_4865	0.39	-0.2
5,774,148	-		Psyr_4865	0.39	-0.1
5,774,148	-		Psyr_4865	0.39	-0.6
5,774,148	-		Psyr_4865	0.39	-1.9
5,774,148	-		Psyr_4865	0.39	-1.0
5,774,148	-		Psyr_4865	0.39	-1.1
5,774,148	-		Psyr_4865	0.39	+0.0
5,774,148	-		Psyr_4865	0.39	-1.2
5,774,165	+		Psyr_4865	0.41	-0.8
5,774,252	+		Psyr_4865	0.48	-0.7
5,774,252	+		Psyr_4865	0.48	+0.4
5,774,252	+		Psyr_4865	0.48	-0.2
5,774,253	-		Psyr_4865	0.49	-1.5
5,774,253	-		Psyr_4865	0.49	-0.2
5,774,314	+		Psyr_4865	0.54	+0.8
5,774,430	+		Psyr_4865	0.65	-0.2
5,774,430	+		Psyr_4865	0.65	-1.0
5,774,430	+		Psyr_4865	0.65	-0.0
5,774,430	+		Psyr_4865	0.65	-2.6
5,774,430	+		Psyr_4865	0.65	+0.4
5,774,430	+		Psyr_4865	0.65	+0.6
5,774,430	+		Psyr_4865	0.65	-0.4
5,774,430	+		Psyr_4865	0.65	-0.6
5,774,430	+		Psyr_4865	0.65	-0.3
5,774,430	+		Psyr_4865	0.65	-0.3
5,774,430	+		Psyr_4865	0.65	+0.8
5,774,430	+		Psyr_4865	0.65	+0.4
5,774,430	+		Psyr_4865	0.65	-0.0
5,774,431	-		Psyr_4865	0.65	+0.9
5,774,431	-		Psyr_4865	0.65	-0.2
5,774,431	-		Psyr_4865	0.65	-0.4
5,774,431	-		Psyr_4865	0.65	+0.5
5,774,431	-		Psyr_4865	0.65	-0.3
5,774,431	-		Psyr_4865	0.65	-1.6
5,774,431	-		Psyr_4865	0.65	-1.2
5,774,431	-		Psyr_4865	0.65	+1.3
5,774,431	-		Psyr_4865	0.65	-1.7
5,774,431	-		Psyr_4865	0.65	-1.3
5,774,431	-		Psyr_4865	0.65	+0.1
5,774,432	+		Psyr_4865	0.65	+0.1
5,774,432	+		Psyr_4865	0.65	-1.0
5,774,433	-		Psyr_4865	0.65	-2.3
5,774,433	-		Psyr_4865	0.65	-0.8
5,774,444	+		Psyr_4865	0.66	+0.0
5,774,444	+		Psyr_4865	0.66	-0.3
5,774,444	+		Psyr_4865	0.66	-0.0
5,774,444	+		Psyr_4865	0.66	-0.6
5,774,445	-		Psyr_4865	0.66	-0.4
5,774,445	-		Psyr_4865	0.66	+0.1
5,774,445	-		Psyr_4865	0.66	+0.5
5,774,452	-		Psyr_4865	0.67	-2.2