Experiment: MBOA 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4835 and Psyr_4836 are separated by 11 nucleotides Psyr_4836 and Psyr_4837 are separated by 151 nucleotides Psyr_4837 and Psyr_4838 are separated by 86 nucleotides Psyr_4838 and Psyr_4839 overlap by 13 nucleotides
Psyr_4835: Psyr_4835 - imidazolonepropionase, at 5,739,201 to 5,740,406
_4835
Psyr_4836: Psyr_4836 - N-formylglutamate deformylase, at 5,740,418 to 5,741,218
_4836
Psyr_4837: Psyr_4837 - Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 5,741,370 to 5,743,628
_4837
Psyr_4838: Psyr_4838 - transcriptional regulator, MerR family, at 5,743,715 to 5,744,161
_4838
Psyr_4839: Psyr_4839 - hypothetical protein, at 5,744,149 to 5,745,078
_4839
Position (kb) 5741
5742
5743
5744 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5740.569 kb on - strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.713 kb on + strand, within Psyr_4836 at 5740.714 kb on - strand, within Psyr_4836 at 5740.763 kb on + strand, within Psyr_4836 at 5740.788 kb on - strand, within Psyr_4836 at 5740.994 kb on + strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.152 kb on + strand at 5741.298 kb on + strand at 5741.299 kb on - strand at 5741.552 kb on + strand at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.719 kb on + strand, within Psyr_4837 at 5741.720 kb on - strand, within Psyr_4837 at 5741.720 kb on - strand, within Psyr_4837 at 5741.720 kb on - strand, within Psyr_4837 at 5741.720 kb on - strand, within Psyr_4837 at 5741.721 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.046 kb on + strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.047 kb on - strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.235 kb on + strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.236 kb on - strand, within Psyr_4837 at 5742.293 kb on - strand, within Psyr_4837 at 5742.319 kb on + strand, within Psyr_4837 at 5742.454 kb on + strand, within Psyr_4837 at 5742.454 kb on + strand, within Psyr_4837 at 5742.454 kb on + strand, within Psyr_4837 at 5742.454 kb on + strand, within Psyr_4837 at 5742.455 kb on - strand, within Psyr_4837 at 5742.455 kb on - strand, within Psyr_4837 at 5742.455 kb on - strand, within Psyr_4837 at 5742.526 kb on + strand, within Psyr_4837 at 5742.526 kb on + strand, within Psyr_4837 at 5742.526 kb on + strand, within Psyr_4837 at 5742.526 kb on + strand, within Psyr_4837 at 5742.527 kb on - strand, within Psyr_4837 at 5742.527 kb on - strand, within Psyr_4837 at 5742.527 kb on - strand, within Psyr_4837 at 5742.527 kb on - strand, within Psyr_4837 at 5742.531 kb on - strand, within Psyr_4837 at 5742.644 kb on - strand, within Psyr_4837 at 5742.753 kb on - strand, within Psyr_4837 at 5742.959 kb on + strand, within Psyr_4837 at 5742.960 kb on - strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.084 kb on + strand, within Psyr_4837 at 5743.085 kb on - strand, within Psyr_4837 at 5743.085 kb on - strand, within Psyr_4837 at 5743.085 kb on - strand, within Psyr_4837 at 5743.684 kb on - strand at 5743.773 kb on - strand, within Psyr_4838 at 5743.773 kb on - strand, within Psyr_4838 at 5743.829 kb on + strand, within Psyr_4838 at 5743.829 kb on + strand, within Psyr_4838 at 5743.830 kb on - strand, within Psyr_4838 at 5744.343 kb on + strand, within Psyr_4839 at 5744.365 kb on - strand, within Psyr_4839 at 5744.379 kb on + strand, within Psyr_4839 at 5744.379 kb on + strand, within Psyr_4839 at 5744.379 kb on + strand, within Psyr_4839 at 5744.380 kb on - strand, within Psyr_4839 at 5744.380 kb on - strand, within Psyr_4839 at 5744.380 kb on - strand, within Psyr_4839 at 5744.402 kb on + strand, within Psyr_4839 at 5744.403 kb on - strand, within Psyr_4839 at 5744.403 kb on - strand, within Psyr_4839 at 5744.403 kb on - strand, within Psyr_4839 at 5744.403 kb on - strand, within Psyr_4839 at 5744.403 kb on - strand, within Psyr_4839 at 5744.510 kb on + strand, within Psyr_4839 at 5744.510 kb on + strand, within Psyr_4839 at 5744.511 kb on - strand, within Psyr_4839 at 5744.511 kb on - strand, within Psyr_4839 at 5744.511 kb on - strand, within Psyr_4839 at 5744.519 kb on + strand, within Psyr_4839 at 5744.519 kb on + strand, within Psyr_4839 at 5744.519 kb on + strand, within Psyr_4839 at 5744.519 kb on + strand, within Psyr_4839 at 5744.520 kb on - strand, within Psyr_4839 at 5744.593 kb on - strand, within Psyr_4839 at 5744.606 kb on - strand, within Psyr_4839 at 5744.625 kb on - strand, within Psyr_4839
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 2.5 mM remove 5,740,569 - Psyr_4836 0.19 +2.4 5,740,664 + Psyr_4836 0.31 +0.1 5,740,664 + Psyr_4836 0.31 -0.4 5,740,664 + Psyr_4836 0.31 +0.8 5,740,664 + Psyr_4836 0.31 +0.8 5,740,664 + Psyr_4836 0.31 +0.6 5,740,665 - Psyr_4836 0.31 +0.4 5,740,665 - Psyr_4836 0.31 -0.0 5,740,665 - Psyr_4836 0.31 +0.4 5,740,665 - Psyr_4836 0.31 -1.3 5,740,665 - Psyr_4836 0.31 +0.7 5,740,665 - Psyr_4836 0.31 -0.4 5,740,665 - Psyr_4836 0.31 +0.4 5,740,665 - Psyr_4836 0.31 -0.9 5,740,665 - Psyr_4836 0.31 +0.7 5,740,665 - Psyr_4836 0.31 +3.0 5,740,665 - Psyr_4836 0.31 -0.6 5,740,713 + Psyr_4836 0.37 +0.6 5,740,714 - Psyr_4836 0.37 +0.6 5,740,763 + Psyr_4836 0.43 +1.0 5,740,788 - Psyr_4836 0.46 +0.8 5,740,994 + Psyr_4836 0.72 -0.8 5,740,995 - Psyr_4836 0.72 +0.3 5,740,995 - Psyr_4836 0.72 -0.5 5,740,995 - Psyr_4836 0.72 +1.1 5,741,102 + Psyr_4836 0.85 -0.5 5,741,102 + Psyr_4836 0.85 +0.1 5,741,102 + Psyr_4836 0.85 +1.0 5,741,102 + Psyr_4836 0.85 +0.6 5,741,102 + Psyr_4836 0.85 -1.2 5,741,102 + Psyr_4836 0.85 +0.4 5,741,102 + Psyr_4836 0.85 +1.7 5,741,102 + Psyr_4836 0.85 -1.4 5,741,102 + Psyr_4836 0.85 +0.1 5,741,102 + Psyr_4836 0.85 +0.5 5,741,102 + Psyr_4836 0.85 +1.0 5,741,102 + Psyr_4836 0.85 +1.2 5,741,103 - Psyr_4836 0.86 +1.0 5,741,103 - Psyr_4836 0.86 +0.1 5,741,103 - Psyr_4836 0.86 +1.7 5,741,103 - Psyr_4836 0.86 +0.2 5,741,103 - Psyr_4836 0.86 +0.3 5,741,152 + -0.6 5,741,298 + +2.5 5,741,299 - -0.9 5,741,552 + +0.5 5,741,719 + Psyr_4837 0.15 -0.8 5,741,719 + Psyr_4837 0.15 -1.1 5,741,719 + Psyr_4837 0.15 +0.2 5,741,719 + Psyr_4837 0.15 -1.2 5,741,719 + Psyr_4837 0.15 -1.2 5,741,719 + Psyr_4837 0.15 -0.8 5,741,719 + Psyr_4837 0.15 -0.7 5,741,720 - Psyr_4837 0.15 -1.2 5,741,720 - Psyr_4837 0.15 +0.9 5,741,720 - Psyr_4837 0.15 +0.4 5,741,720 - Psyr_4837 0.15 +1.6 5,741,721 + Psyr_4837 0.16 +0.2 5,742,046 + Psyr_4837 0.30 +0.4 5,742,046 + Psyr_4837 0.30 -0.1 5,742,046 + Psyr_4837 0.30 -1.1 5,742,046 + Psyr_4837 0.30 -1.5 5,742,046 + Psyr_4837 0.30 +0.1 5,742,046 + Psyr_4837 0.30 +0.1 5,742,046 + Psyr_4837 0.30 -0.4 5,742,046 + Psyr_4837 0.30 -0.4 5,742,047 - Psyr_4837 0.30 -0.8 5,742,047 - Psyr_4837 0.30 +0.7 5,742,047 - Psyr_4837 0.30 -0.6 5,742,047 - Psyr_4837 0.30 -0.0 5,742,047 - Psyr_4837 0.30 -0.7 5,742,047 - Psyr_4837 0.30 -1.1 5,742,047 - Psyr_4837 0.30 -0.0 5,742,047 - Psyr_4837 0.30 -1.2 5,742,047 - Psyr_4837 0.30 +0.9 5,742,047 - Psyr_4837 0.30 -1.0 5,742,235 + Psyr_4837 0.38 -2.9 5,742,235 + Psyr_4837 0.38 +1.7 5,742,235 + Psyr_4837 0.38 -0.2 5,742,235 + Psyr_4837 0.38 +1.4 5,742,235 + Psyr_4837 0.38 +0.7 5,742,235 + Psyr_4837 0.38 -2.6 5,742,235 + Psyr_4837 0.38 -1.5 5,742,236 - Psyr_4837 0.38 -0.6 5,742,236 - Psyr_4837 0.38 -1.1 5,742,236 - Psyr_4837 0.38 -0.2 5,742,236 - Psyr_4837 0.38 -2.1 5,742,236 - Psyr_4837 0.38 -0.6 5,742,236 - Psyr_4837 0.38 -0.6 5,742,236 - Psyr_4837 0.38 -2.4 5,742,236 - Psyr_4837 0.38 -0.3 5,742,236 - Psyr_4837 0.38 -0.8 5,742,293 - Psyr_4837 0.41 -0.4 5,742,319 + Psyr_4837 0.42 -0.7 5,742,454 + Psyr_4837 0.48 -1.5 5,742,454 + Psyr_4837 0.48 -0.7 5,742,454 + Psyr_4837 0.48 -1.2 5,742,454 + Psyr_4837 0.48 -0.6 5,742,455 - Psyr_4837 0.48 -1.1 5,742,455 - Psyr_4837 0.48 -1.7 5,742,455 - Psyr_4837 0.48 +0.1 5,742,526 + Psyr_4837 0.51 -2.1 5,742,526 + Psyr_4837 0.51 -0.8 5,742,526 + Psyr_4837 0.51 -0.9 5,742,526 + Psyr_4837 0.51 -0.5 5,742,527 - Psyr_4837 0.51 -1.5 5,742,527 - Psyr_4837 0.51 -3.4 5,742,527 - Psyr_4837 0.51 +0.4 5,742,527 - Psyr_4837 0.51 -0.7 5,742,531 - Psyr_4837 0.51 -0.2 5,742,644 - Psyr_4837 0.56 -0.9 5,742,753 - Psyr_4837 0.61 -0.9 5,742,959 + Psyr_4837 0.70 -0.2 5,742,960 - Psyr_4837 0.70 -0.6 5,743,084 + Psyr_4837 0.76 -1.1 5,743,084 + Psyr_4837 0.76 -0.4 5,743,084 + Psyr_4837 0.76 -0.2 5,743,084 + Psyr_4837 0.76 -0.7 5,743,084 + Psyr_4837 0.76 -0.9 5,743,084 + Psyr_4837 0.76 -3.3 5,743,084 + Psyr_4837 0.76 +0.1 5,743,084 + Psyr_4837 0.76 -1.9 5,743,084 + Psyr_4837 0.76 -1.3 5,743,084 + Psyr_4837 0.76 +0.8 5,743,084 + Psyr_4837 0.76 +0.1 5,743,084 + Psyr_4837 0.76 -1.8 5,743,085 - Psyr_4837 0.76 -0.2 5,743,085 - Psyr_4837 0.76 +0.4 5,743,085 - Psyr_4837 0.76 +0.4 5,743,684 - +0.5 5,743,773 - Psyr_4838 0.13 -1.6 5,743,773 - Psyr_4838 0.13 -1.1 5,743,829 + Psyr_4838 0.26 -0.9 5,743,829 + Psyr_4838 0.26 +0.8 5,743,830 - Psyr_4838 0.26 -0.5 5,744,343 + Psyr_4839 0.21 -1.2 5,744,365 - Psyr_4839 0.23 -2.5 5,744,379 + Psyr_4839 0.25 -2.4 5,744,379 + Psyr_4839 0.25 -0.5 5,744,379 + Psyr_4839 0.25 -0.8 5,744,380 - Psyr_4839 0.25 +0.7 5,744,380 - Psyr_4839 0.25 +0.3 5,744,380 - Psyr_4839 0.25 -1.6 5,744,402 + Psyr_4839 0.27 -1.1 5,744,403 - Psyr_4839 0.27 -0.2 5,744,403 - Psyr_4839 0.27 -1.2 5,744,403 - Psyr_4839 0.27 -0.2 5,744,403 - Psyr_4839 0.27 -1.9 5,744,403 - Psyr_4839 0.27 -0.7 5,744,510 + Psyr_4839 0.39 -1.8 5,744,510 + Psyr_4839 0.39 -3.4 5,744,511 - Psyr_4839 0.39 -2.1 5,744,511 - Psyr_4839 0.39 -1.7 5,744,511 - Psyr_4839 0.39 -3.2 5,744,519 + Psyr_4839 0.40 -2.4 5,744,519 + Psyr_4839 0.40 -0.8 5,744,519 + Psyr_4839 0.40 -2.2 5,744,519 + Psyr_4839 0.40 -1.2 5,744,520 - Psyr_4839 0.40 -0.7 5,744,593 - Psyr_4839 0.48 -1.4 5,744,606 - Psyr_4839 0.49 -0.1 5,744,625 - Psyr_4839 0.51 -1.8
Or see this region's nucleotide sequence