Experiment: MBOA 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2536 and Psyr_2537 are separated by 318 nucleotides Psyr_2537 and Psyr_2538 overlap by 4 nucleotides Psyr_2538 and Psyr_2539 overlap by 4 nucleotides
Psyr_2536: Psyr_2536 - transcriptional regulator, LysR family, at 2,950,688 to 2,951,677
_2536
Psyr_2537: Psyr_2537 - conserved hypothetical protein, at 2,951,996 to 2,953,456
_2537
Psyr_2538: Psyr_2538 - Binding-protein-dependent transport systems inner membrane component, at 2,953,453 to 2,954,427
_2538
Psyr_2539: Psyr_2539 - Binding-protein-dependent transport systems inner membrane component, at 2,954,424 to 2,955,344
_2539
Position (kb)
2951
2952
2953
2954 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2951.392 kb on + strand, within Psyr_2536 at 2951.392 kb on + strand, within Psyr_2536 at 2951.392 kb on + strand, within Psyr_2536 at 2951.392 kb on + strand, within Psyr_2536 at 2951.392 kb on + strand, within Psyr_2536 at 2951.393 kb on - strand, within Psyr_2536 at 2951.666 kb on + strand at 2951.666 kb on + strand at 2951.667 kb on - strand at 2951.667 kb on - strand at 2951.667 kb on - strand at 2951.667 kb on - strand at 2951.675 kb on + strand at 2951.690 kb on + strand at 2951.800 kb on - strand at 2951.884 kb on + strand at 2952.401 kb on + strand, within Psyr_2537 at 2952.439 kb on - strand, within Psyr_2537 at 2952.439 kb on - strand, within Psyr_2537 at 2952.454 kb on + strand, within Psyr_2537 at 2952.455 kb on - strand, within Psyr_2537 at 2952.866 kb on + strand, within Psyr_2537 at 2953.001 kb on - strand, within Psyr_2537 at 2953.265 kb on + strand, within Psyr_2537 at 2953.813 kb on - strand, within Psyr_2538 at 2953.816 kb on + strand, within Psyr_2538 at 2953.817 kb on - strand, within Psyr_2538 at 2954.383 kb on + strand at 2954.383 kb on + strand at 2954.383 kb on + strand at 2954.383 kb on + strand at 2954.383 kb on + strand at 2954.383 kb on + strand at 2954.384 kb on - strand at 2954.385 kb on - strand at 2954.387 kb on - strand at 2954.387 kb on - strand at 2954.406 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 2.5 mM remove 2,951,392 + Psyr_2536 0.71 +1.2 2,951,392 + Psyr_2536 0.71 -0.9 2,951,392 + Psyr_2536 0.71 -1.0 2,951,392 + Psyr_2536 0.71 +1.2 2,951,392 + Psyr_2536 0.71 +0.1 2,951,393 - Psyr_2536 0.71 +0.3 2,951,666 + -2.0 2,951,666 + -0.6 2,951,667 - -1.5 2,951,667 - -0.6 2,951,667 - +0.4 2,951,667 - +0.1 2,951,675 + -0.1 2,951,690 + +0.9 2,951,800 - -0.1 2,951,884 + -3.7 2,952,401 + Psyr_2537 0.28 -0.1 2,952,439 - Psyr_2537 0.30 +1.6 2,952,439 - Psyr_2537 0.30 +1.4 2,952,454 + Psyr_2537 0.31 -0.3 2,952,455 - Psyr_2537 0.31 -0.4 2,952,866 + Psyr_2537 0.60 +1.9 2,953,001 - Psyr_2537 0.69 -2.5 2,953,265 + Psyr_2537 0.87 +1.6 2,953,813 - Psyr_2538 0.37 -2.1 2,953,816 + Psyr_2538 0.37 -0.6 2,953,817 - Psyr_2538 0.37 -1.5 2,954,383 + -2.3 2,954,383 + -0.0 2,954,383 + -0.7 2,954,383 + +0.2 2,954,383 + -0.4 2,954,383 + -1.6 2,954,384 - -0.1 2,954,385 - +0.5 2,954,387 - +0.4 2,954,387 - -1.1 2,954,406 - -0.1
Or see this region's nucleotide sequence