Experiment: MBOA 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0278 and Psyr_0279 are separated by 38 nucleotides Psyr_0279 and Psyr_0280 are separated by 152 nucleotides Psyr_0280 and Psyr_0281 are separated by 307 nucleotides
Psyr_0278: Psyr_0278 - ABC-3, at 295,781 to 296,569
_0278
Psyr_0279: Psyr_0279 - lipoprotein, putative, at 296,608 to 297,324
_0279
Psyr_0280: Psyr_0280 - Catalase, at 297,477 to 299,627
_0280
Psyr_0281: Psyr_0281 - ABC transporter, at 299,935 to 300,942
_0281
Position (kb) 297
298
299
300 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 296.506 kb on + strand at 296.506 kb on + strand at 296.506 kb on + strand at 296.506 kb on + strand at 296.506 kb on + strand at 296.506 kb on + strand at 296.507 kb on - strand at 296.507 kb on - strand at 296.507 kb on - strand at 296.507 kb on - strand at 296.507 kb on - strand at 296.508 kb on + strand at 296.508 kb on + strand at 296.508 kb on + strand at 296.508 kb on + strand at 296.508 kb on + strand at 296.509 kb on - strand at 296.509 kb on - strand at 296.568 kb on - strand at 296.593 kb on + strand at 296.594 kb on - strand at 296.594 kb on - strand at 296.594 kb on - strand at 296.629 kb on + strand at 296.630 kb on - strand at 296.630 kb on - strand at 296.630 kb on - strand at 296.630 kb on - strand at 296.851 kb on + strand, within Psyr_0279 at 296.852 kb on - strand, within Psyr_0279 at 296.852 kb on - strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.870 kb on + strand, within Psyr_0279 at 296.871 kb on - strand, within Psyr_0279 at 297.404 kb on + strand at 297.404 kb on + strand at 297.405 kb on - strand at 297.405 kb on - strand at 297.405 kb on - strand at 297.405 kb on - strand at 297.407 kb on - strand at 297.464 kb on + strand at 297.464 kb on + strand at 297.464 kb on + strand at 297.464 kb on + strand at 297.464 kb on + strand at 297.465 kb on - strand at 297.465 kb on - strand at 297.465 kb on - strand at 297.465 kb on - strand at 297.465 kb on - strand at 297.465 kb on - strand at 297.571 kb on - strand at 297.661 kb on + strand at 297.661 kb on + strand at 297.661 kb on + strand at 297.661 kb on + strand at 297.661 kb on + strand at 297.662 kb on - strand at 298.008 kb on + strand, within Psyr_0280 at 298.008 kb on + strand, within Psyr_0280 at 298.009 kb on - strand, within Psyr_0280 at 298.009 kb on - strand, within Psyr_0280 at 298.114 kb on + strand, within Psyr_0280 at 298.114 kb on + strand, within Psyr_0280 at 298.114 kb on + strand, within Psyr_0280 at 298.115 kb on - strand, within Psyr_0280 at 298.115 kb on - strand, within Psyr_0280 at 298.115 kb on - strand, within Psyr_0280 at 298.115 kb on - strand, within Psyr_0280 at 298.147 kb on + strand, within Psyr_0280 at 298.273 kb on + strand, within Psyr_0280 at 298.349 kb on - strand, within Psyr_0280 at 298.483 kb on + strand, within Psyr_0280 at 298.484 kb on - strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.582 kb on + strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.583 kb on - strand, within Psyr_0280 at 298.714 kb on - strand, within Psyr_0280 at 298.714 kb on - strand, within Psyr_0280 at 298.714 kb on - strand, within Psyr_0280 at 298.714 kb on - strand, within Psyr_0280 at 298.735 kb on + strand, within Psyr_0280 at 298.874 kb on + strand, within Psyr_0280 at 298.875 kb on - strand, within Psyr_0280 at 298.875 kb on - strand, within Psyr_0280 at 298.890 kb on - strand, within Psyr_0280 at 298.890 kb on - strand, within Psyr_0280 at 298.890 kb on - strand, within Psyr_0280 at 299.158 kb on + strand, within Psyr_0280 at 299.159 kb on - strand, within Psyr_0280 at 299.159 kb on - strand, within Psyr_0280 at 299.283 kb on - strand, within Psyr_0280 at 299.305 kb on + strand, within Psyr_0280 at 299.305 kb on + strand, within Psyr_0280 at 299.305 kb on + strand, within Psyr_0280 at 299.306 kb on - strand, within Psyr_0280 at 299.317 kb on + strand, within Psyr_0280 at 299.317 kb on + strand, within Psyr_0280 at 299.317 kb on + strand, within Psyr_0280 at 299.318 kb on - strand, within Psyr_0280 at 299.318 kb on - strand, within Psyr_0280 at 299.318 kb on - strand, within Psyr_0280 at 299.318 kb on - strand, within Psyr_0280 at 299.363 kb on + strand, within Psyr_0280 at 299.639 kb on + strand at 299.639 kb on + strand at 299.639 kb on + strand at 299.639 kb on + strand at 299.640 kb on - strand at 299.674 kb on + strand at 299.674 kb on + strand at 299.748 kb on - strand at 299.748 kb on - strand at 299.758 kb on + strand at 299.758 kb on + strand at 299.758 kb on + strand at 299.758 kb on + strand at 299.759 kb on - strand at 299.759 kb on - strand at 299.759 kb on - strand at 299.779 kb on + strand at 299.779 kb on + strand at 299.780 kb on - strand at 299.805 kb on - strand at 299.808 kb on + strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.809 kb on - strand at 299.816 kb on - strand at 299.870 kb on + strand at 299.950 kb on - strand at 299.987 kb on + strand at 300.069 kb on + strand, within Psyr_0281
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 2.5 mM remove 296,506 + -0.8 296,506 + -0.8 296,506 + -1.4 296,506 + -0.6 296,506 + -1.0 296,506 + -0.5 296,507 - -1.6 296,507 - -0.3 296,507 - -2.1 296,507 - +1.3 296,507 - +0.8 296,508 + -1.3 296,508 + -0.1 296,508 + -1.4 296,508 + +1.4 296,508 + -2.0 296,509 - -1.4 296,509 - +0.5 296,568 - -0.2 296,593 + +0.6 296,594 - -0.5 296,594 - +0.2 296,594 - -0.0 296,629 + +1.2 296,630 - +0.7 296,630 - +0.3 296,630 - -0.3 296,630 - -0.5 296,851 + Psyr_0279 0.34 -0.1 296,852 - Psyr_0279 0.34 +0.3 296,852 - Psyr_0279 0.34 -1.1 296,870 + Psyr_0279 0.37 +0.5 296,870 + Psyr_0279 0.37 +0.8 296,870 + Psyr_0279 0.37 -0.5 296,870 + Psyr_0279 0.37 -0.2 296,870 + Psyr_0279 0.37 +0.1 296,870 + Psyr_0279 0.37 -0.2 296,870 + Psyr_0279 0.37 +0.9 296,871 - Psyr_0279 0.37 -0.0 297,404 + +0.8 297,404 + +1.5 297,405 - +1.7 297,405 - -0.4 297,405 - -0.4 297,405 - -0.1 297,407 - -0.6 297,464 + -0.9 297,464 + +0.5 297,464 + -0.3 297,464 + +0.2 297,464 + -1.8 297,465 - -0.3 297,465 - -1.1 297,465 - -0.0 297,465 - -0.2 297,465 - -0.5 297,465 - +0.4 297,571 - -1.8 297,661 + +0.9 297,661 + +0.9 297,661 + +1.2 297,661 + -0.1 297,661 + +1.3 297,662 - +0.4 298,008 + Psyr_0280 0.25 +0.4 298,008 + Psyr_0280 0.25 +0.7 298,009 - Psyr_0280 0.25 +1.5 298,009 - Psyr_0280 0.25 -0.2 298,114 + Psyr_0280 0.30 +0.6 298,114 + Psyr_0280 0.30 +0.2 298,114 + Psyr_0280 0.30 +0.6 298,115 - Psyr_0280 0.30 +1.3 298,115 - Psyr_0280 0.30 -0.6 298,115 - Psyr_0280 0.30 +1.2 298,115 - Psyr_0280 0.30 -1.5 298,147 + Psyr_0280 0.31 -2.2 298,273 + Psyr_0280 0.37 -1.2 298,349 - Psyr_0280 0.41 -0.2 298,483 + Psyr_0280 0.47 -0.6 298,484 - Psyr_0280 0.47 +1.0 298,582 + Psyr_0280 0.51 +0.4 298,582 + Psyr_0280 0.51 -0.4 298,582 + Psyr_0280 0.51 +0.4 298,582 + Psyr_0280 0.51 +0.8 298,582 + Psyr_0280 0.51 -0.1 298,582 + Psyr_0280 0.51 -0.7 298,582 + Psyr_0280 0.51 -0.2 298,583 - Psyr_0280 0.51 +0.4 298,583 - Psyr_0280 0.51 -1.0 298,583 - Psyr_0280 0.51 +0.4 298,583 - Psyr_0280 0.51 -0.7 298,583 - Psyr_0280 0.51 -0.4 298,583 - Psyr_0280 0.51 +1.4 298,583 - Psyr_0280 0.51 -2.9 298,583 - Psyr_0280 0.51 +0.2 298,714 - Psyr_0280 0.58 +0.9 298,714 - Psyr_0280 0.58 -0.2 298,714 - Psyr_0280 0.58 -0.7 298,714 - Psyr_0280 0.58 +0.5 298,735 + Psyr_0280 0.58 +0.4 298,874 + Psyr_0280 0.65 +2.7 298,875 - Psyr_0280 0.65 -2.3 298,875 - Psyr_0280 0.65 +0.4 298,890 - Psyr_0280 0.66 +0.5 298,890 - Psyr_0280 0.66 -0.7 298,890 - Psyr_0280 0.66 +0.2 299,158 + Psyr_0280 0.78 +0.1 299,159 - Psyr_0280 0.78 -0.8 299,159 - Psyr_0280 0.78 -0.9 299,283 - Psyr_0280 0.84 -0.1 299,305 + Psyr_0280 0.85 -0.5 299,305 + Psyr_0280 0.85 -0.2 299,305 + Psyr_0280 0.85 +1.6 299,306 - Psyr_0280 0.85 +0.1 299,317 + Psyr_0280 0.86 +0.1 299,317 + Psyr_0280 0.86 +0.9 299,317 + Psyr_0280 0.86 -1.4 299,318 - Psyr_0280 0.86 +0.2 299,318 - Psyr_0280 0.86 +2.2 299,318 - Psyr_0280 0.86 +0.3 299,318 - Psyr_0280 0.86 +1.6 299,363 + Psyr_0280 0.88 -0.3 299,639 + -0.0 299,639 + -0.1 299,639 + -0.3 299,639 + +0.4 299,640 - -1.0 299,674 + +0.1 299,674 + +1.8 299,748 - +0.1 299,748 - +0.5 299,758 + -0.2 299,758 + +0.1 299,758 + +0.3 299,758 + -0.5 299,759 - +0.5 299,759 - +0.3 299,759 - -0.6 299,779 + -2.1 299,779 + -0.4 299,780 - -0.7 299,805 - -0.7 299,808 + -0.0 299,809 - -0.4 299,809 - -1.0 299,809 - -0.3 299,809 - +0.2 299,809 - +1.2 299,809 - +1.3 299,809 - +1.1 299,809 - -0.7 299,816 - -0.5 299,870 + +0.1 299,950 - -0.4 299,987 + -2.4 300,069 + Psyr_0281 0.13 +1.0
Or see this region's nucleotide sequence