Experiment: MBOA 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4610 and Psyr_4611 overlap by 4 nucleotides Psyr_4611 and Psyr_4612 are separated by 186 nucleotides Psyr_4612 and Psyr_4613 are separated by 11 nucleotides
Psyr_4610: Psyr_4610 - phosphoglycolate phosphatase, at 5,468,046 to 5,468,864
_4610
Psyr_4611: Psyr_4611 - ribulose-5-phosphate 3-epimerase, at 5,468,861 to 5,469,535
_4611
Psyr_4612: Psyr_4612 - Binding-protein-dependent transport systems inner membrane component, at 5,469,722 to 5,470,543
_4612
Psyr_4613: Psyr_4613 - Binding-protein-dependent transport systems inner membrane component, at 5,470,555 to 5,471,802
_4613
Position (kb) 5469
5470
5471 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5469.574 kb on + strand at 5469.575 kb on - strand at 5469.575 kb on - strand at 5469.705 kb on + strand at 5469.705 kb on + strand at 5469.705 kb on + strand at 5469.705 kb on + strand at 5469.705 kb on + strand at 5469.706 kb on - strand at 5469.706 kb on - strand at 5469.706 kb on - strand at 5469.706 kb on - strand at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.128 kb on + strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.129 kb on - strand, within Psyr_4612 at 5470.132 kb on + strand, within Psyr_4612 at 5470.132 kb on + strand, within Psyr_4612 at 5470.165 kb on - strand, within Psyr_4612 at 5470.165 kb on - strand, within Psyr_4612 at 5470.500 kb on + strand at 5470.500 kb on + strand at 5470.500 kb on + strand at 5470.500 kb on + strand at 5470.500 kb on + strand at 5470.500 kb on + strand at 5470.501 kb on - strand at 5470.501 kb on - strand at 5470.501 kb on - strand at 5470.501 kb on - strand at 5470.501 kb on - strand at 5470.501 kb on - strand at 5470.504 kb on - strand at 5470.504 kb on - strand at 5470.504 kb on - strand at 5470.531 kb on - strand at 5470.556 kb on + strand at 5470.557 kb on - strand at 5470.593 kb on + strand at 5470.593 kb on + strand at 5470.593 kb on + strand at 5470.593 kb on + strand at 5470.593 kb on + strand at 5470.593 kb on + strand at 5470.595 kb on + strand at 5470.595 kb on + strand at 5470.595 kb on + strand at 5470.596 kb on - strand at 5470.596 kb on - strand at 5470.596 kb on - strand at 5470.596 kb on - strand at 5470.596 kb on - strand at 5470.604 kb on + strand at 5470.680 kb on - strand, within Psyr_4613 at 5470.680 kb on - strand, within Psyr_4613 at 5470.695 kb on - strand, within Psyr_4613 at 5470.695 kb on - strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.742 kb on + strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.743 kb on - strand, within Psyr_4613 at 5470.812 kb on - strand, within Psyr_4613 at 5470.868 kb on + strand, within Psyr_4613 at 5470.868 kb on + strand, within Psyr_4613 at 5470.868 kb on + strand, within Psyr_4613 at 5470.868 kb on + strand, within Psyr_4613 at 5470.868 kb on + strand, within Psyr_4613 at 5470.869 kb on - strand, within Psyr_4613 at 5470.869 kb on - strand, within Psyr_4613 at 5470.869 kb on - strand, within Psyr_4613 at 5470.899 kb on - strand, within Psyr_4613 at 5470.899 kb on - strand, within Psyr_4613 at 5470.899 kb on - strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.946 kb on + strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5470.947 kb on - strand, within Psyr_4613 at 5471.144 kb on + strand, within Psyr_4613 at 5471.144 kb on + strand, within Psyr_4613 at 5471.144 kb on + strand, within Psyr_4613 at 5471.145 kb on - strand, within Psyr_4613 at 5471.226 kb on - strand, within Psyr_4613 at 5471.226 kb on - strand, within Psyr_4613 at 5471.300 kb on + strand, within Psyr_4613 at 5471.300 kb on + strand, within Psyr_4613 at 5471.300 kb on + strand, within Psyr_4613 at 5471.300 kb on + strand, within Psyr_4613 at 5471.300 kb on + strand, within Psyr_4613 at 5471.301 kb on - strand, within Psyr_4613 at 5471.301 kb on - strand, within Psyr_4613 at 5471.304 kb on - strand, within Psyr_4613 at 5471.322 kb on + strand, within Psyr_4613 at 5471.323 kb on - strand, within Psyr_4613 at 5471.391 kb on + strand, within Psyr_4613 at 5471.391 kb on + strand, within Psyr_4613 at 5471.391 kb on + strand, within Psyr_4613 at 5471.391 kb on + strand, within Psyr_4613 at 5471.392 kb on - strand, within Psyr_4613 at 5471.392 kb on - strand, within Psyr_4613 at 5471.392 kb on - strand, within Psyr_4613 at 5471.392 kb on - strand, within Psyr_4613 at 5471.392 kb on - strand, within Psyr_4613 at 5471.393 kb on + strand, within Psyr_4613 at 5471.393 kb on + strand, within Psyr_4613 at 5471.393 kb on + strand, within Psyr_4613 at 5471.393 kb on + strand, within Psyr_4613 at 5471.394 kb on - strand, within Psyr_4613 at 5471.394 kb on - strand, within Psyr_4613 at 5471.394 kb on - strand, within Psyr_4613 at 5471.394 kb on - strand, within Psyr_4613 at 5471.394 kb on - strand, within Psyr_4613
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 2.5 mM remove 5,469,574 + +0.1 5,469,575 - -0.6 5,469,575 - -0.3 5,469,705 + -1.0 5,469,705 + +0.0 5,469,705 + +0.1 5,469,705 + -1.1 5,469,705 + -0.9 5,469,706 - +0.1 5,469,706 - -0.4 5,469,706 - -0.3 5,469,706 - -0.9 5,470,128 + Psyr_4612 0.49 +1.4 5,470,128 + Psyr_4612 0.49 -0.0 5,470,128 + Psyr_4612 0.49 -0.4 5,470,128 + Psyr_4612 0.49 -1.5 5,470,128 + Psyr_4612 0.49 +0.2 5,470,128 + Psyr_4612 0.49 +0.9 5,470,128 + Psyr_4612 0.49 +2.6 5,470,128 + Psyr_4612 0.49 +0.0 5,470,129 - Psyr_4612 0.50 +0.7 5,470,129 - Psyr_4612 0.50 -1.2 5,470,129 - Psyr_4612 0.50 -0.3 5,470,129 - Psyr_4612 0.50 -0.6 5,470,129 - Psyr_4612 0.50 -0.9 5,470,129 - Psyr_4612 0.50 -0.6 5,470,129 - Psyr_4612 0.50 +0.5 5,470,129 - Psyr_4612 0.50 +0.9 5,470,129 - Psyr_4612 0.50 -0.0 5,470,129 - Psyr_4612 0.50 +1.9 5,470,129 - Psyr_4612 0.50 +0.3 5,470,129 - Psyr_4612 0.50 +1.0 5,470,132 + Psyr_4612 0.50 -0.7 5,470,132 + Psyr_4612 0.50 -0.0 5,470,165 - Psyr_4612 0.54 -0.1 5,470,165 - Psyr_4612 0.54 -0.6 5,470,500 + -1.1 5,470,500 + +0.9 5,470,500 + -0.1 5,470,500 + +0.1 5,470,500 + -0.0 5,470,500 + -0.3 5,470,501 - -0.8 5,470,501 - +0.9 5,470,501 - -0.0 5,470,501 - +1.8 5,470,501 - -0.4 5,470,501 - +1.8 5,470,504 - -0.8 5,470,504 - -0.3 5,470,504 - -1.0 5,470,531 - +0.2 5,470,556 + +0.1 5,470,557 - +0.3 5,470,593 + -0.2 5,470,593 + +0.7 5,470,593 + -0.3 5,470,593 + -0.2 5,470,593 + +0.4 5,470,593 + +0.3 5,470,595 + -0.3 5,470,595 + +0.1 5,470,595 + +0.3 5,470,596 - -0.5 5,470,596 - -1.3 5,470,596 - +0.1 5,470,596 - -0.2 5,470,596 - +0.9 5,470,604 + -2.2 5,470,680 - Psyr_4613 0.10 -0.1 5,470,680 - Psyr_4613 0.10 -0.1 5,470,695 - Psyr_4613 0.11 -0.4 5,470,695 - Psyr_4613 0.11 +0.5 5,470,742 + Psyr_4613 0.15 -0.2 5,470,742 + Psyr_4613 0.15 +0.0 5,470,742 + Psyr_4613 0.15 -0.0 5,470,742 + Psyr_4613 0.15 -0.1 5,470,742 + Psyr_4613 0.15 -0.0 5,470,742 + Psyr_4613 0.15 +0.0 5,470,743 - Psyr_4613 0.15 +0.2 5,470,743 - Psyr_4613 0.15 -0.0 5,470,743 - Psyr_4613 0.15 +0.2 5,470,743 - Psyr_4613 0.15 -1.2 5,470,743 - Psyr_4613 0.15 +0.7 5,470,743 - Psyr_4613 0.15 -0.5 5,470,743 - Psyr_4613 0.15 +0.9 5,470,743 - Psyr_4613 0.15 -0.6 5,470,743 - Psyr_4613 0.15 +0.4 5,470,743 - Psyr_4613 0.15 -0.8 5,470,743 - Psyr_4613 0.15 -0.0 5,470,812 - Psyr_4613 0.21 -0.1 5,470,868 + Psyr_4613 0.25 +0.2 5,470,868 + Psyr_4613 0.25 -0.1 5,470,868 + Psyr_4613 0.25 -0.1 5,470,868 + Psyr_4613 0.25 -0.4 5,470,868 + Psyr_4613 0.25 +0.5 5,470,869 - Psyr_4613 0.25 +0.6 5,470,869 - Psyr_4613 0.25 -0.2 5,470,869 - Psyr_4613 0.25 -2.1 5,470,899 - Psyr_4613 0.28 -1.8 5,470,899 - Psyr_4613 0.28 +0.2 5,470,899 - Psyr_4613 0.28 +0.6 5,470,946 + Psyr_4613 0.31 -2.0 5,470,946 + Psyr_4613 0.31 +1.2 5,470,946 + Psyr_4613 0.31 -0.5 5,470,946 + Psyr_4613 0.31 -0.4 5,470,946 + Psyr_4613 0.31 +0.6 5,470,946 + Psyr_4613 0.31 +0.1 5,470,946 + Psyr_4613 0.31 +0.3 5,470,946 + Psyr_4613 0.31 +0.2 5,470,946 + Psyr_4613 0.31 -0.3 5,470,946 + Psyr_4613 0.31 +0.8 5,470,947 - Psyr_4613 0.31 -0.9 5,470,947 - Psyr_4613 0.31 -2.0 5,470,947 - Psyr_4613 0.31 -0.1 5,470,947 - Psyr_4613 0.31 +0.4 5,470,947 - Psyr_4613 0.31 +0.4 5,470,947 - Psyr_4613 0.31 +0.1 5,470,947 - Psyr_4613 0.31 -0.5 5,470,947 - Psyr_4613 0.31 -0.7 5,470,947 - Psyr_4613 0.31 +0.9 5,470,947 - Psyr_4613 0.31 +0.1 5,471,144 + Psyr_4613 0.47 +0.1 5,471,144 + Psyr_4613 0.47 -1.3 5,471,144 + Psyr_4613 0.47 -1.7 5,471,145 - Psyr_4613 0.47 -0.9 5,471,226 - Psyr_4613 0.54 +0.8 5,471,226 - Psyr_4613 0.54 +3.6 5,471,300 + Psyr_4613 0.60 +0.0 5,471,300 + Psyr_4613 0.60 +0.5 5,471,300 + Psyr_4613 0.60 -0.5 5,471,300 + Psyr_4613 0.60 -0.5 5,471,300 + Psyr_4613 0.60 -0.1 5,471,301 - Psyr_4613 0.60 +0.6 5,471,301 - Psyr_4613 0.60 +0.4 5,471,304 - Psyr_4613 0.60 -0.2 5,471,322 + Psyr_4613 0.61 -0.1 5,471,323 - Psyr_4613 0.62 -0.6 5,471,391 + Psyr_4613 0.67 +1.5 5,471,391 + Psyr_4613 0.67 -0.7 5,471,391 + Psyr_4613 0.67 +0.2 5,471,391 + Psyr_4613 0.67 +0.4 5,471,392 - Psyr_4613 0.67 +0.0 5,471,392 - Psyr_4613 0.67 +0.9 5,471,392 - Psyr_4613 0.67 -0.6 5,471,392 - Psyr_4613 0.67 -0.2 5,471,392 - Psyr_4613 0.67 +0.9 5,471,393 + Psyr_4613 0.67 -0.4 5,471,393 + Psyr_4613 0.67 +1.1 5,471,393 + Psyr_4613 0.67 -0.4 5,471,393 + Psyr_4613 0.67 +1.3 5,471,394 - Psyr_4613 0.67 -0.1 5,471,394 - Psyr_4613 0.67 -3.0 5,471,394 - Psyr_4613 0.67 +0.2 5,471,394 - Psyr_4613 0.67 +0.0 5,471,394 - Psyr_4613 0.67 +0.0
Or see this region's nucleotide sequence