Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0990

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
1,119,244	+				-0.3
1,119,244	+				-0.9
1,119,245	-				-0.8
1,119,248	+				+0.3
1,119,248	+				-0.7
1,119,248	+				+0.9
1,119,248	+				+0.8
1,119,248	+				+2.5
1,119,249	-				-0.6
1,119,306	+				+0.9
1,119,306	+				+1.2
1,119,350	+				+2.3
1,119,351	-				-1.5
1,119,351	-				+1.5
1,119,351	-				-0.5
1,119,351	-				+0.3
1,119,591	-		Psyr_0989	0.39	-0.1
1,119,594	+		Psyr_0989	0.39	-0.3
1,119,594	+		Psyr_0989	0.39	-1.2
1,119,594	+		Psyr_0989	0.39	+1.0
1,119,594	+		Psyr_0989	0.39	-0.4
1,119,594	+		Psyr_0989	0.39	-0.1
1,119,594	+		Psyr_0989	0.39	+0.4
1,119,595	-		Psyr_0989	0.39	+0.1
1,119,595	-		Psyr_0989	0.39	-1.9
1,119,595	-		Psyr_0989	0.39	-0.1
1,119,595	-		Psyr_0989	0.39	+0.5
1,119,595	-		Psyr_0989	0.39	+0.4
1,119,595	-		Psyr_0989	0.39	+2.3
1,119,595	-		Psyr_0989	0.39	+0.0
1,119,595	-		Psyr_0989	0.39	-0.5
1,119,595	-		Psyr_0989	0.39	-0.2
1,119,595	-		Psyr_0989	0.39	+0.7
1,119,595	-		Psyr_0989	0.39	+0.8
1,119,599	+		Psyr_0989	0.40	+0.7
1,119,599	+		Psyr_0989	0.40	+1.4
1,119,599	+		Psyr_0989	0.40	+0.1
1,119,600	-		Psyr_0989	0.40	-2.0
1,119,600	-		Psyr_0989	0.40	-0.6
1,119,600	-		Psyr_0989	0.40	-0.7
1,119,600	-		Psyr_0989	0.40	-0.1
1,119,600	-		Psyr_0989	0.40	-0.1
1,119,600	-		Psyr_0989	0.40	-0.3
1,119,600	-		Psyr_0989	0.40	-0.9
1,119,695	+				-1.0
1,119,695	+		Psyr_0989	0.55	-0.4
1,119,695	+		Psyr_0989	0.55	-0.0
1,119,696	-		Psyr_0989	0.55	+0.2
1,119,696	-		Psyr_0989	0.55	+0.4
1,119,696	-		Psyr_0989	0.55	-0.8
1,119,696	-		Psyr_0989	0.55	+0.6
1,119,696	-		Psyr_0989	0.55	+0.4
1,119,815	+		Psyr_0989	0.74	+0.4
1,120,109	+				-0.3
1,120,110	-				+1.2
1,120,110	-				-0.9
1,120,110	-				-0.1
1,120,148	+				-0.2
1,120,148	+				+0.1
1,120,148	+				-2.1
1,120,148	+				+0.5
1,120,148	+				+0.3
1,120,149	-				+0.1
1,120,149	-				-0.0
1,120,149	-				-0.0
1,120,149	-				+0.9
1,120,149	-				+0.0
1,120,149	-				-3.2
1,120,149	-				-1.7
1,120,149	-				+0.2
1,120,260	+				+0.3
1,120,260	+				-1.3
1,120,260	+				+0.0
1,120,261	-				-0.1
1,120,278	+				-1.4
1,120,284	+				-1.0
1,120,285	-				-1.2
1,120,306	+				-0.1
1,120,306	+				-0.1
1,120,307	-				-0.9
1,120,324	+		Psyr_0990	0.10	+0.6
1,120,324	+		Psyr_0990	0.10	+0.1
1,120,324	+		Psyr_0990	0.10	-0.6
1,120,389	+		Psyr_0990	0.14	+0.1
1,120,533	+		Psyr_0990	0.23	-0.1
1,120,533	+		Psyr_0990	0.23	-0.2
1,120,533	+		Psyr_0990	0.23	+1.6
1,120,534	-		Psyr_0990	0.23	-0.3
1,120,534	-		Psyr_0990	0.23	-0.1
1,120,621	+		Psyr_0990	0.28	-0.4
1,120,621	+		Psyr_0990	0.28	+0.0
1,120,622	-		Psyr_0990	0.28	+0.3
1,120,622	-		Psyr_0990	0.28	+0.9
1,120,622	-		Psyr_0990	0.28	+1.8
1,120,632	+		Psyr_0990	0.29	+0.8
1,120,633	-		Psyr_0990	0.29	-1.0
1,120,633	-		Psyr_0990	0.29	+1.0
1,120,665	+		Psyr_0990	0.31	+0.8
1,120,666	-		Psyr_0990	0.31	+0.1
1,120,666	-		Psyr_0990	0.31	-0.7
1,120,710	+		Psyr_0990	0.33	+0.2
1,120,710	+		Psyr_0990	0.33	+0.9
1,120,711	-		Psyr_0990	0.33	-0.2
1,120,711	-		Psyr_0990	0.33	+0.1
1,120,711	-		Psyr_0990	0.33	+0.8
1,120,711	-		Psyr_0990	0.33	+0.1
1,120,746	+		Psyr_0990	0.35	+1.1
1,120,746	+		Psyr_0990	0.35	-1.0
1,120,746	+		Psyr_0990	0.35	+0.3
1,120,746	+		Psyr_0990	0.35	+0.4
1,120,746	+		Psyr_0990	0.35	+0.3
1,120,746	+		Psyr_0990	0.35	-1.3
1,120,747	-		Psyr_0990	0.36	+0.1
1,120,747	-		Psyr_0990	0.36	-1.0
1,120,842	+		Psyr_0990	0.41	+1.5
1,120,842	+		Psyr_0990	0.41	+1.1
1,120,842	+		Psyr_0990	0.41	+0.7
1,120,842	+		Psyr_0990	0.41	+0.7
1,120,842	+		Psyr_0990	0.41	-0.4
1,120,842	+		Psyr_0990	0.41	+0.4
1,120,843	-		Psyr_0990	0.41	-0.4
1,120,843	-		Psyr_0990	0.41	+0.1
1,120,843	-		Psyr_0990	0.41	+0.3
1,120,843	-		Psyr_0990	0.41	+1.2
1,120,843	-		Psyr_0990	0.41	+0.2
1,120,843	-		Psyr_0990	0.41	-0.3
1,120,843	-		Psyr_0990	0.41	-1.2
1,120,843	-		Psyr_0990	0.41	-0.5
1,120,923	+		Psyr_0990	0.46	+1.1
1,121,170	+		Psyr_0990	0.61	-2.3
1,121,230	-		Psyr_0990	0.64	-0.2
1,121,361	+		Psyr_0990	0.72	+0.5
1,121,361	+		Psyr_0990	0.72	-1.0
1,121,361	+		Psyr_0990	0.72	-0.6
1,121,362	-		Psyr_0990	0.72	+0.1
1,121,362	-		Psyr_0990	0.72	+0.7
1,121,362	-		Psyr_0990	0.72	+1.1
1,121,693	+				+0.2
1,121,693	+				+0.1
1,121,693	+				+0.0
1,121,693	+				+0.3
1,121,693	+				+1.0
1,121,693	+				+0.0
1,121,694	-				-0.5
1,121,694	-				+0.3
1,121,694	-				+0.1
1,121,694	-				-0.5
1,121,694	-				-0.2
1,121,694	-				+0.2
1,121,694	-				-0.8
1,121,694	-				-1.3
1,121,915	-				+0.6
1,122,007	+				-1.1
1,122,007	+				-0.4
1,122,008	-				-0.3
1,122,008	-				+1.3
1,122,029	+				+0.7
1,122,113	+				+1.7
1,122,119	+				-0.7
1,122,119	+				+0.9
1,122,120	-				-0.0
1,122,120	-				+0.4
1,122,441	+		Psyr_0991	0.15	+0.2
1,122,442	-		Psyr_0991	0.16	-0.3
1,122,442	-		Psyr_0991	0.16	+0.2
1,122,474	+		Psyr_0991	0.17	+0.1
1,122,475	-		Psyr_0991	0.17	-0.2
1,122,475	-		Psyr_0991	0.17	+0.7
1,122,475	-		Psyr_0991	0.17	-0.2
1,122,475	-		Psyr_0991	0.17	-1.1
1,122,588	+		Psyr_0991	0.23	-1.5
1,122,589	-		Psyr_0991	0.23	+1.7
1,122,597	+		Psyr_0991	0.24	-0.0
1,122,597	+		Psyr_0991	0.24	+0.4
1,122,597	+		Psyr_0991	0.24	-0.4
1,122,598	-		Psyr_0991	0.24	+1.3
1,122,598	-		Psyr_0991	0.24	+0.9
1,122,662	+		Psyr_0991	0.27	-1.1
1,122,662	+		Psyr_0991	0.27	-0.2
1,122,663	-		Psyr_0991	0.27	-1.4
1,122,663	-		Psyr_0991	0.27	+1.1
1,122,663	-		Psyr_0991	0.27	+2.3
1,122,663	-		Psyr_0991	0.27	-1.0
1,122,768	+		Psyr_0991	0.32	-1.0
1,122,768	+		Psyr_0991	0.32	+0.4
1,122,768	+		Psyr_0991	0.32	-1.3
1,122,768	+		Psyr_0991	0.32	+1.5
1,122,768	+		Psyr_0991	0.32	-1.4
1,122,769	-		Psyr_0991	0.32	+0.9
1,122,769	-		Psyr_0991	0.32	+1.3
1,122,769	-		Psyr_0991	0.32	+0.6
1,122,813	+		Psyr_0991	0.35	+0.1
1,122,814	-		Psyr_0991	0.35	-2.0
1,122,814	-		Psyr_0991	0.35	-0.3