Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0973

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
1,104,625	+		Psyr_0971	0.35	-1.1
1,104,625	+		Psyr_0971	0.35	+1.3
1,104,626	-		Psyr_0971	0.35	+0.3
1,104,626	-		Psyr_0971	0.35	-2.1
1,104,780	+		Psyr_0971	0.65	-0.8
1,104,793	+		Psyr_0971	0.68	+0.8
1,104,793	+		Psyr_0971	0.68	-1.8
1,104,793	+		Psyr_0971	0.68	+0.4
1,104,793	+		Psyr_0971	0.68	-1.0
1,104,793	+		Psyr_0971	0.68	+0.7
1,104,793	+		Psyr_0971	0.68	+0.8
1,104,793	+		Psyr_0971	0.68	-0.0
1,104,793	+		Psyr_0971	0.68	-1.0
1,104,793	+		Psyr_0971	0.68	+0.7
1,104,794	-		Psyr_0971	0.68	-0.6
1,104,794	-		Psyr_0971	0.68	+0.1
1,104,794	-		Psyr_0971	0.68	-0.6
1,104,794	-		Psyr_0971	0.68	-0.1
1,104,794	-		Psyr_0971	0.68	-0.0
1,104,794	-		Psyr_0971	0.68	-0.9
1,104,794	-		Psyr_0971	0.68	+1.9
1,104,794	-		Psyr_0971	0.68	-1.3
1,104,794	-		Psyr_0971	0.68	-0.1
1,104,794	-		Psyr_0971	0.68	+1.1
1,104,794	-		Psyr_0971	0.68	+1.3
1,104,794	-		Psyr_0971	0.68	-0.6
1,104,823	+		Psyr_0971	0.74	+0.5
1,104,823	+		Psyr_0971	0.74	+0.9
1,104,823	+		Psyr_0971	0.74	-0.1
1,104,823	+		Psyr_0971	0.74	-0.8
1,104,823	+		Psyr_0971	0.74	+0.1
1,104,823	+		Psyr_0971	0.74	+1.4
1,104,824	-		Psyr_0971	0.74	+0.7
1,104,824	-		Psyr_0971	0.74	-0.6
1,104,824	-		Psyr_0971	0.74	+0.2
1,104,827	-		Psyr_0971	0.75	-1.1
1,104,880	+		Psyr_0971	0.85	-0.4
1,104,881	-		Psyr_0971	0.85	+0.2
1,104,898	+		Psyr_0971	0.89	-0.2
1,104,899	-		Psyr_0971	0.89	-0.0
1,105,026	+				+0.8
1,105,027	-				-0.5
1,105,032	+				+0.9
1,105,032	+				+0.5
1,105,032	+				+0.0
1,105,032	+				+0.6
1,105,033	-				-0.4
1,105,033	-				-0.7
1,105,033	-				+0.3
1,105,099	+		Psyr_0972	0.27	+0.5
1,105,099	+		Psyr_0972	0.27	+0.4
1,105,100	-		Psyr_0972	0.27	-0.8
1,105,107	+		Psyr_0972	0.30	+0.7
1,105,276	+		Psyr_0972	0.89	-0.7
1,105,276	+		Psyr_0972	0.89	+0.4
1,105,276	+		Psyr_0972	0.89	-0.7
1,105,276	+		Psyr_0972	0.89	+1.5
1,105,277	-		Psyr_0972	0.89	-0.1
1,105,277	-		Psyr_0972	0.89	-0.0
1,105,277	-		Psyr_0972	0.89	-0.6
1,105,277	-		Psyr_0972	0.89	+0.8
1,105,277	-		Psyr_0972	0.89	-1.8
1,105,277	-		Psyr_0972	0.89	+0.2
1,105,277	-		Psyr_0972	0.89	+0.3
1,105,391	+				-2.7
1,105,391	+				+0.4
1,105,391	+				-0.3
1,105,391	+				+0.4
1,105,391	+				-2.8
1,105,391	+				-0.6
1,105,392	-				+0.3
1,105,392	-				-1.6
1,105,392	-				-0.3
1,105,392	-				-0.1
1,105,392	-				+0.6
1,105,392	-				+0.4
1,105,392	-				+0.8
1,105,392	-				+0.1
1,105,392	-				+1.5
1,105,392	-				+1.0
1,105,392	-				+0.1
1,105,392	-				+0.3
1,105,392	-				+1.6
1,105,402	+				+0.4
1,105,503	-				+0.5
1,105,503	-				+1.3
1,105,504	+				-0.2
1,105,504	+				+0.4
1,105,504	+				+0.6
1,105,504	+				-0.0
1,105,504	+				-0.8
1,105,504	+				-0.3
1,105,504	+				+0.5
1,105,505	-				+0.3
1,105,505	-				+0.3
1,105,505	-				+0.6
1,105,505	-				+0.7
1,105,505	-				-0.3
1,105,505	-				-1.4
1,105,569	+				+0.3
1,105,569	+				+0.1
1,105,569	+				-1.5
1,105,569	+				+0.5
1,105,569	+				-1.5
1,105,569	+				-1.9
1,105,569	+				-0.5
1,105,569	+				+1.1
1,105,569	+				-0.3
1,105,570	-				+0.1
1,105,570	-				-0.6
1,105,570	-				+0.3
1,105,570	-				+0.1
1,105,570	-				-2.6
1,105,571	+				+0.9
1,105,571	+				+3.3
1,105,624	+				-0.2
1,105,625	-				+0.4
1,105,723	+		Psyr_0973	0.14	-1.3
1,105,723	+		Psyr_0973	0.14	+1.3
1,105,724	-		Psyr_0973	0.14	-1.4
1,105,724	-		Psyr_0973	0.14	+0.4
1,105,724	-		Psyr_0973	0.14	-0.3
1,105,724	-		Psyr_0973	0.14	+0.3
1,105,744	+		Psyr_0973	0.16	+0.1
1,105,972	+		Psyr_0973	0.43	+0.5
1,105,972	+		Psyr_0973	0.43	+0.0
1,105,981	+		Psyr_0973	0.44	-0.8
1,106,053	+		Psyr_0973	0.53	-0.8
1,106,053	+		Psyr_0973	0.53	+0.8
1,106,053	+		Psyr_0973	0.53	+0.4
1,106,053	+		Psyr_0973	0.53	+0.6
1,106,053	+		Psyr_0973	0.53	+1.3
1,106,053	+		Psyr_0973	0.53	-0.0
1,106,053	+		Psyr_0973	0.53	-2.2
1,106,053	+		Psyr_0973	0.53	-0.2
1,106,054	-		Psyr_0973	0.53	+0.8
1,106,054	-		Psyr_0973	0.53	-0.5
1,106,054	-		Psyr_0973	0.53	+0.2
1,106,054	-		Psyr_0973	0.53	-1.2
1,106,054	-		Psyr_0973	0.53	+0.1
1,106,054	-		Psyr_0973	0.53	+0.1
1,106,054	-		Psyr_0973	0.53	-0.0
1,106,104	+		Psyr_0973	0.59	-0.7
1,106,104	+		Psyr_0973	0.59	+0.5
1,106,105	-		Psyr_0973	0.59	-0.9
1,106,356	+		Psyr_0973	0.89	-0.1
1,106,589	+		Psyr_0974	0.17	-0.0
1,106,589	+		Psyr_0974	0.17	-0.5
1,106,590	-		Psyr_0974	0.17	+0.5
1,106,590	-		Psyr_0974	0.17	-0.3
1,106,590	-		Psyr_0974	0.17	-0.1
1,106,590	-		Psyr_0974	0.17	+0.3
1,106,590	-		Psyr_0974	0.17	+0.5
1,106,590	-		Psyr_0974	0.17	+0.5
1,106,728	-		Psyr_0974	0.34	+0.2
1,106,741	+		Psyr_0974	0.36	+0.3
1,106,741	+		Psyr_0974	0.36	-0.7
1,106,741	+		Psyr_0974	0.36	+0.5
1,106,741	+		Psyr_0974	0.36	+0.7
1,106,742	-		Psyr_0974	0.36	+0.2
1,106,742	-		Psyr_0974	0.36	+0.5
1,106,742	-		Psyr_0974	0.36	+1.0
1,106,742	-		Psyr_0974	0.36	-0.3
1,106,742	-		Psyr_0974	0.36	-1.1
1,106,742	-		Psyr_0974	0.36	-0.1
1,106,817	+		Psyr_0974	0.45	+0.1
1,106,818	-		Psyr_0974	0.45	+0.1
1,106,919	+		Psyr_0974	0.57	-2.1
1,106,920	-		Psyr_0974	0.58	-0.2
1,106,920	-		Psyr_0974	0.58	-0.1
1,106,920	-		Psyr_0974	0.58	+0.2
1,106,922	+		Psyr_0974	0.58	+1.0
1,106,923	-		Psyr_0974	0.58	-1.1
1,106,923	-		Psyr_0974	0.58	+1.1
1,107,261	+				-2.0
1,107,272	+				-1.0
1,107,273	-				+0.8
1,107,273	-				+0.0
1,107,293	+				+0.9
1,107,316	-				+0.4
1,107,319	+				-0.2
1,107,319	+				-0.3
1,107,320	-				-0.5
1,107,320	-				-1.2
1,107,320	-				+0.2
1,107,324	+				+0.4
1,107,324	+				+0.5
1,107,359	+				-1.6
1,107,359	+				-0.7
1,107,360	-				-1.3
1,107,363	+				-1.6
1,107,363	+				+0.2
1,107,364	-				-1.0
1,107,364	-				+0.3
1,107,365	+				-0.0
1,107,365	+				-0.2
1,107,365	+				+0.3
1,107,366	-				-1.0
1,107,366	-				-0.3
1,107,366	-				-1.3
1,107,366	-				-0.4
1,107,366	-				+0.5
1,107,366	-				+1.3
1,107,378	+				+0.5
1,107,378	+				+0.3
1,107,379	-				-0.4
1,107,379	-				+0.3
1,107,379	-				+0.1
1,107,379	-				+0.0
1,107,379	-				-0.9
1,107,390	+				+0.4
1,107,390	+				-0.3
1,107,390	+				-0.3
1,107,391	-				-0.9
1,107,391	-				+0.5
1,107,391	-				-0.6
1,107,391	-				-0.2
1,107,391	-				-0.5
1,107,398	+				+0.4
1,107,398	+				-0.2
1,107,398	+				+0.5
1,107,399	-				-0.7
1,107,399	-				+0.2
1,107,399	-				+0.6
1,107,399	-				+0.7