Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4333

Experiment: MBOA 1.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 1.2 mM
5,183,720	+		Psyr_4331	0.79	-0.2
5,183,918	+				-0.2
5,183,918	+				-0.4
5,183,918	+				-0.1
5,183,918	+				+2.0
5,183,918	+				+1.0
5,183,918	+				-0.5
5,183,918	+				-0.1
5,183,918	+				-0.1
5,183,918	+				+0.2
5,183,918	+				-0.5
5,183,918	+				-0.4
5,183,918	+				+0.2
5,183,918	+				-0.8
5,183,918	+				-0.5
5,183,918	+				+0.0
5,183,918	+				+0.5
5,183,918	+				+0.3
5,183,918	+				-0.1
5,183,918	+				+2.3
5,183,918	+				-0.8
5,183,918	+				-0.5
5,183,919	-				+0.4
5,183,919	-				+0.6
5,183,919	-				-0.3
5,183,919	-				+0.6
5,183,919	-				-0.9
5,183,919	-				+0.9
5,183,919	-				-0.9
5,183,919	-				-0.2
5,183,919	-				+0.1
5,183,919	-				+0.2
5,183,919	-				+0.0
5,183,919	-				+0.3
5,183,919	-				-1.2
5,183,919	-				-0.6
5,183,919	-				-2.0
5,183,919	-				-0.4
5,183,919	-				+1.4
5,183,919	-				-0.4
5,183,919	-				-0.1
5,183,919	-				-0.0
5,183,919	-				+0.6
5,183,919	-				-1.8
5,183,919	-				-0.1
5,183,939	+				+0.8
5,183,939	+				-0.3
5,183,939	+				-0.2
5,183,939	+				+0.2
5,183,939	+				+0.8
5,183,959	-				+0.7
5,183,983	+				+0.7
5,184,098	+				+0.0
5,184,099	-				+1.7
5,184,133	+				+0.6
5,184,134	-				-2.5
5,184,140	-				-0.6
5,184,161	+				+0.4
5,184,161	+				-0.2
5,184,161	+				-0.3
5,184,161	+				+1.0
5,184,161	+				+0.3
5,184,161	+				-0.3
5,184,161	+				+0.4
5,184,161	+				+0.8
5,184,162	-				-0.4
5,184,162	-				-0.6
5,184,162	-				-1.5
5,184,162	-				+0.3
5,184,162	-				-0.3
5,184,162	-				-0.5
5,184,162	-				-0.5
5,184,162	-				+1.4
5,184,162	-				+0.1
5,184,162	-				-0.9
5,184,162	-				+1.0
5,184,162	-				-1.0
5,184,162	-				+1.8
5,184,162	-				-0.4
5,184,162	-				-2.5
5,184,162	-				+0.6
5,184,162	-				-0.3
5,184,162	-				+0.5
5,184,162	-				+0.3
5,184,162	-				-1.0
5,184,163	+				-0.5
5,184,163	+				+0.4
5,184,163	+				+0.2
5,184,163	+				-0.4
5,184,163	+				-0.3
5,184,163	+				+0.7
5,184,163	+				+1.0
5,184,163	+				-0.5
5,184,163	+				+1.6
5,184,163	+				-0.0
5,184,163	+				-0.0
5,184,163	+				-0.0
5,184,163	+				-0.5
5,184,163	+				-1.7
5,184,163	+				+1.4
5,184,164	-				+1.0
5,184,164	-				-0.9
5,184,164	-				-1.5
5,184,164	-				+0.7
5,184,164	-				+0.6
5,184,164	-				+1.2
5,184,164	-				-0.5
5,184,164	-				-0.3
5,184,164	-				+0.2
5,184,164	-				-0.1
5,184,164	-				+0.4
5,184,164	-				-1.4
5,184,274	+		Psyr_4332	0.19	-0.3
5,184,274	+		Psyr_4332	0.19	-1.8
5,184,352	+		Psyr_4332	0.38	-0.0
5,184,352	+		Psyr_4332	0.38	-0.2
5,184,352	+		Psyr_4332	0.38	+0.3
5,184,352	+		Psyr_4332	0.38	+1.6
5,184,352	+		Psyr_4332	0.38	+0.3
5,184,352	+		Psyr_4332	0.38	-0.3
5,184,352	+		Psyr_4332	0.38	-0.0
5,184,352	+		Psyr_4332	0.38	-1.5
5,184,352	+		Psyr_4332	0.38	-0.2
5,184,352	+		Psyr_4332	0.38	-0.1
5,184,352	+		Psyr_4332	0.38	-0.0
5,184,352	+		Psyr_4332	0.38	+0.4
5,184,352	+		Psyr_4332	0.38	-0.2
5,184,352	+		Psyr_4332	0.38	-0.2
5,184,352	+		Psyr_4332	0.38	+0.1
5,184,353	-		Psyr_4332	0.38	+1.0
5,184,353	-		Psyr_4332	0.38	-0.7
5,184,353	-		Psyr_4332	0.38	+1.1
5,184,353	-		Psyr_4332	0.38	-0.6
5,184,353	-		Psyr_4332	0.38	+0.2
5,184,353	-		Psyr_4332	0.38	+0.6
5,184,353	-		Psyr_4332	0.38	+0.1
5,184,353	-		Psyr_4332	0.38	+1.1
5,184,353	-		Psyr_4332	0.38	-0.2
5,184,353	-		Psyr_4332	0.38	-0.1
5,184,353	-		Psyr_4332	0.38	-0.3
5,184,353	-		Psyr_4332	0.38	-0.7
5,184,353	-		Psyr_4332	0.38	-0.1
5,184,355	-		Psyr_4332	0.39	+1.5
5,184,406	+		Psyr_4332	0.51	-0.4
5,184,406	+		Psyr_4332	0.51	+1.0
5,184,406	+		Psyr_4332	0.51	-0.6
5,184,407	-		Psyr_4332	0.51	+0.7
5,184,407	-		Psyr_4332	0.51	-0.0
5,184,407	-		Psyr_4332	0.51	+0.6
5,184,561	+		Psyr_4332	0.88	+0.6
5,184,561	+		Psyr_4332	0.88	-0.5
5,184,562	-		Psyr_4332	0.88	+0.2
5,184,828	-		Psyr_4333	0.21	-0.8
5,184,828	-		Psyr_4333	0.21	-0.6
5,184,860	+		Psyr_4333	0.25	+0.4
5,185,158	-		Psyr_4333	0.58	+0.1
5,185,158	-		Psyr_4333	0.58	-0.7
5,185,185	-		Psyr_4333	0.61	-0.8
5,185,185	-		Psyr_4333	0.61	+1.0
5,185,208	+		Psyr_4333	0.64	-1.4
5,185,208	+		Psyr_4333	0.64	-1.6
5,185,208	+		Psyr_4333	0.64	-1.1
5,185,208	+		Psyr_4333	0.64	-0.6
5,185,209	-		Psyr_4333	0.64	-1.9
5,185,209	-		Psyr_4333	0.64	-0.5
5,185,209	-		Psyr_4333	0.64	-2.2
5,185,210	+		Psyr_4333	0.64	+0.2
5,185,210	+		Psyr_4333	0.64	-0.8
5,185,210	+		Psyr_4333	0.64	+0.6
5,185,349	-		Psyr_4333	0.80	-2.3
5,185,551	+				-1.9
5,185,591	-				+0.4
5,185,677	+		Psyr_4334	0.12	-0.4
5,185,677	+		Psyr_4334	0.12	-0.4
5,185,677	+		Psyr_4334	0.12	-0.4
5,185,678	-		Psyr_4334	0.12	-1.4
5,185,678	-		Psyr_4334	0.12	-0.3
5,185,678	-		Psyr_4334	0.12	-0.3
5,185,681	+		Psyr_4334	0.12	+0.6
5,185,681	+		Psyr_4334	0.12	-0.6
5,185,682	-		Psyr_4334	0.12	-0.1
5,185,773	+		Psyr_4334	0.20	+0.7
5,185,774	-		Psyr_4334	0.20	-0.2
5,185,809	+		Psyr_4334	0.23	-1.4
5,185,809	+		Psyr_4334	0.23	+0.8
5,185,810	-		Psyr_4334	0.23	-1.0
5,185,810	-		Psyr_4334	0.23	-1.1
5,185,837	-		Psyr_4334	0.26	-0.2
5,185,837	-		Psyr_4334	0.26	+0.2
5,185,837	-		Psyr_4334	0.26	-1.1
5,185,839	+		Psyr_4334	0.26	+0.1
5,185,839	+		Psyr_4334	0.26	-0.2
5,185,839	+		Psyr_4334	0.26	-0.3
5,185,839	+		Psyr_4334	0.26	+0.5
5,185,839	+		Psyr_4334	0.26	+0.2
5,185,840	-		Psyr_4334	0.26	+3.0
5,185,840	-		Psyr_4334	0.26	+0.1
5,185,840	-		Psyr_4334	0.26	+2.0
5,185,840	-		Psyr_4334	0.26	+1.0
5,185,840	-		Psyr_4334	0.26	+0.6
5,185,840	-		Psyr_4334	0.26	-0.1
5,185,840	-		Psyr_4334	0.26	-1.2
5,185,840	-		Psyr_4334	0.26	-1.3
5,185,840	-		Psyr_4334	0.26	+1.5
5,185,880	+		Psyr_4334	0.29	+0.9
5,185,880	+		Psyr_4334	0.29	+0.4
5,185,880	+		Psyr_4334	0.29	+0.5
5,185,880	+		Psyr_4334	0.29	+0.3
5,185,880	+		Psyr_4334	0.29	-0.1
5,185,881	-		Psyr_4334	0.29	-1.0
5,185,881	-		Psyr_4334	0.29	+0.5
5,185,881	-		Psyr_4334	0.29	-1.2
5,185,881	-		Psyr_4334	0.29	-0.9
5,185,881	-		Psyr_4334	0.29	-1.5
5,185,881	-		Psyr_4334	0.29	+0.0
5,185,881	-		Psyr_4334	0.29	-0.1
5,185,902	-		Psyr_4334	0.31	-0.3
5,185,944	+		Psyr_4334	0.35	+1.2
5,185,945	-		Psyr_4334	0.35	-1.6
5,185,983	+		Psyr_4334	0.38	-0.5
5,185,983	+		Psyr_4334	0.38	-0.8
5,185,986	+		Psyr_4334	0.38	-0.4
5,185,986	+		Psyr_4334	0.38	-0.3
5,185,986	+		Psyr_4334	0.38	-0.9
5,185,986	+		Psyr_4334	0.38	-0.1
5,185,986	+		Psyr_4334	0.38	+0.5
5,185,986	+		Psyr_4334	0.38	-0.9
5,185,987	-		Psyr_4334	0.38	-0.3
5,185,987	-		Psyr_4334	0.38	+1.0
5,185,987	-		Psyr_4334	0.38	-0.2
5,185,987	-		Psyr_4334	0.38	+0.2
5,185,987	-		Psyr_4334	0.38	-1.6
5,185,987	-		Psyr_4334	0.38	+0.6
5,185,987	-		Psyr_4334	0.38	+2.0
5,185,987	-		Psyr_4334	0.38	-0.1
5,185,989	+		Psyr_4334	0.39	+0.7
5,185,989	+		Psyr_4334	0.39	-0.0
5,185,989	+		Psyr_4334	0.39	+0.3
5,185,989	+		Psyr_4334	0.39	-0.4
5,185,989	+		Psyr_4334	0.39	+0.2
5,185,989	+		Psyr_4334	0.39	+0.8
5,185,990	-		Psyr_4334	0.39	-0.1
5,185,990	-		Psyr_4334	0.39	+1.0
5,185,990	-		Psyr_4334	0.39	+0.5
5,185,990	-		Psyr_4334	0.39	-0.7
5,185,990	-		Psyr_4334	0.39	+0.8
5,186,011	+		Psyr_4334	0.41	+0.7
5,186,012	-		Psyr_4334	0.41	-0.2
5,186,019	+		Psyr_4334	0.41	+0.6
5,186,039	+		Psyr_4334	0.43	+0.8
5,186,039	+		Psyr_4334	0.43	-0.9
5,186,040	-		Psyr_4334	0.43	-0.1
5,186,040	-		Psyr_4334	0.43	+0.5
5,186,176	-		Psyr_4334	0.55	-0.1
5,186,176	-		Psyr_4334	0.55	-1.1
5,186,176	-		Psyr_4334	0.55	+1.0