Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5085

Experiment: MBOA 1.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 1.2 mM
6,031,058	+		Psyr_5084	0.85	-0.9
6,031,058	+		Psyr_5084	0.85	-0.5
6,031,058	+		Psyr_5084	0.85	+0.5
6,031,058	+		Psyr_5084	0.85	+2.0
6,031,058	+		Psyr_5084	0.85	+0.5
6,031,059	-		Psyr_5084	0.85	+0.4
6,031,059	-		Psyr_5084	0.85	-1.6
6,031,059	-		Psyr_5084	0.85	-0.9
6,031,059	-		Psyr_5084	0.85	-0.3
6,031,249	+				+0.3
6,031,249	+				-1.1
6,031,249	+				+0.3
6,031,249	+				+0.9
6,031,249	+				+0.6
6,031,249	+				+0.8
6,031,249	+				+0.4
6,031,249	+				+0.2
6,031,249	+				-0.4
6,031,249	+				+0.0
6,031,249	+				+0.0
6,031,249	+				+0.7
6,031,249	+				+0.5
6,031,249	+				-0.8
6,031,249	+				-0.3
6,031,249	+				+0.7
6,031,249	+				+0.6
6,031,249	+				-1.4
6,031,249	+				-0.5
6,031,249	+				-0.5
6,031,249	+				-1.7
6,031,249	+				+0.1
6,031,249	+				-0.2
6,031,249	+				+0.6
6,031,249	+				-0.6
6,031,249	+				-1.1
6,031,249	+				+0.8
6,031,250	-				+0.3
6,031,250	-				-0.0
6,031,250	-				-0.6
6,031,250	-				-1.2
6,031,250	-				+0.9
6,031,250	-				-0.0
6,031,250	-				+0.9
6,031,250	-				-2.0
6,031,250	-				+0.2
6,031,250	-				-0.9
6,031,250	-				+0.1
6,031,250	-				+1.0
6,031,250	-				-1.2
6,031,250	-				-2.3
6,031,250	-				-2.2
6,031,250	-				-1.0
6,031,250	-				-0.8
6,031,250	-				+0.4
6,031,250	-				-0.1
6,031,250	-				+0.7
6,031,250	-				-0.2
6,031,250	-				+0.4
6,031,250	-				+0.1
6,031,250	-				+1.3
6,031,250	-				+1.6
6,031,250	-				+0.6
6,031,348	-				-0.4
6,031,363	+				+0.6
6,031,363	+				-1.9
6,031,363	+				-0.2
6,031,363	+				+0.1
6,031,363	+				+0.3
6,031,363	+				+0.7
6,031,364	-				-0.8
6,031,364	-				-0.0
6,031,364	-				+0.4
6,031,367	+				+0.1
6,031,430	-				-0.9
6,031,459	+				+1.6
6,031,459	+				-0.4
6,031,459	+				+0.9
6,031,459	+				+0.2
6,031,459	+				-1.2
6,031,459	+				+1.1
6,031,459	+				+1.1
6,031,460	-				+0.5
6,031,460	-				+0.5
6,031,462	+				-0.7
6,031,462	+				-0.4
6,031,462	+				+0.2
6,031,662	+				+0.6
6,031,675	+				-0.3
6,031,676	-				-1.1
6,031,700	+				+0.6
6,031,700	+				-0.9
6,031,701	-				-0.6
6,031,701	-				-0.6
6,031,765	+				-0.5
6,031,765	+				-1.1
6,031,765	+				-0.8
6,031,765	+				+1.2
6,031,766	-				-1.1
6,031,766	-				-0.4
6,031,780	-				+0.1
6,031,780	-				-0.3
6,031,792	+				-1.2
6,031,792	+				+0.6
6,031,793	-				+0.1
6,031,793	-				+0.1
6,031,851	+				+0.5
6,031,851	+				-0.4
6,031,851	+				+0.2
6,031,851	+				+1.1
6,031,852	-				+0.0
6,031,852	-				-0.4
6,031,852	-				-1.1
6,031,870	+				+0.4
6,031,870	+				-0.6
6,031,871	-				+0.4
6,031,871	-				+0.4
6,031,916	+				-0.9
6,032,042	+		Psyr_5085	0.11	+0.0
6,032,042	+		Psyr_5085	0.11	+1.4
6,032,042	+		Psyr_5085	0.11	-1.1
6,032,042	+		Psyr_5085	0.11	-0.2
6,032,042	+		Psyr_5085	0.11	+1.2
6,032,043	-		Psyr_5085	0.11	-0.6
6,032,043	-		Psyr_5085	0.11	-0.4
6,032,043	-		Psyr_5085	0.11	+0.7
6,032,210	+		Psyr_5085	0.21	+1.1
6,032,210	+		Psyr_5085	0.21	-0.0
6,032,210	+		Psyr_5085	0.21	-2.3
6,032,210	+		Psyr_5085	0.21	-0.2
6,032,210	+		Psyr_5085	0.21	-0.4
6,032,210	+		Psyr_5085	0.21	+0.0
6,032,210	+		Psyr_5085	0.21	+0.1
6,032,210	+		Psyr_5085	0.21	-0.7
6,032,210	+		Psyr_5085	0.21	+1.5
6,032,210	+		Psyr_5085	0.21	+0.3
6,032,210	+		Psyr_5085	0.21	-0.4
6,032,210	+		Psyr_5085	0.21	-0.4
6,032,210	+		Psyr_5085	0.21	-0.3
6,032,210	+		Psyr_5085	0.21	+0.3
6,032,210	+		Psyr_5085	0.21	+0.5
6,032,210	+		Psyr_5085	0.21	-1.3
6,032,210	+		Psyr_5085	0.21	-1.9
6,032,211	-		Psyr_5085	0.21	-0.1
6,032,211	-		Psyr_5085	0.21	-1.1
6,032,211	-		Psyr_5085	0.21	-0.5
6,032,211	-		Psyr_5085	0.21	-0.9
6,032,211	-		Psyr_5085	0.21	-0.5
6,032,211	-		Psyr_5085	0.21	-0.6
6,032,211	-		Psyr_5085	0.21	-0.8
6,032,211	-		Psyr_5085	0.21	-0.3
6,032,211	-		Psyr_5085	0.21	-0.4
6,032,211	-		Psyr_5085	0.21	-0.5
6,032,211	-		Psyr_5085	0.21	-0.7
6,032,211	-		Psyr_5085	0.21	+0.2
6,032,211	-		Psyr_5085	0.21	-2.3
6,032,211	-		Psyr_5085	0.21	-1.5
6,032,273	+		Psyr_5085	0.25	-0.2
6,032,273	+		Psyr_5085	0.25	+1.1
6,032,274	-		Psyr_5085	0.25	+0.2
6,032,393	+		Psyr_5085	0.32	+0.9
6,032,393	+		Psyr_5085	0.32	-1.5
6,032,393	+		Psyr_5085	0.32	+1.1
6,032,394	-		Psyr_5085	0.32	+0.7
6,032,394	-		Psyr_5085	0.32	+0.1
6,032,394	-		Psyr_5085	0.32	+0.1
6,032,394	-		Psyr_5085	0.32	-0.0
6,032,394	-		Psyr_5085	0.32	-0.6
6,032,394	-		Psyr_5085	0.32	+0.5
6,032,424	-		Psyr_5085	0.34	-0.4
6,032,424	-		Psyr_5085	0.34	-3.1
6,032,459	+		Psyr_5085	0.36	-1.0
6,032,459	+		Psyr_5085	0.36	-0.7
6,032,459	+		Psyr_5085	0.36	+0.2
6,032,459	+		Psyr_5085	0.36	-0.3
6,032,460	-		Psyr_5085	0.36	+0.7
6,032,460	-		Psyr_5085	0.36	-1.5
6,032,544	-		Psyr_5085	0.42	-0.1
6,032,544	-		Psyr_5085	0.42	-0.4
6,032,716	+		Psyr_5085	0.52	-3.6
6,032,716	+		Psyr_5085	0.52	-0.3
6,032,716	+		Psyr_5085	0.52	+0.8
6,032,717	-		Psyr_5085	0.52	-0.7
6,032,717	-		Psyr_5085	0.52	+0.2
6,032,717	-		Psyr_5085	0.52	+0.1
6,032,869	-		Psyr_5085	0.62	+0.8
6,032,894	+		Psyr_5085	0.63	+0.5
6,032,895	-		Psyr_5085	0.63	-0.5
6,033,071	+		Psyr_5085	0.74	+0.3
6,033,071	+		Psyr_5085	0.74	+1.5
6,033,071	+		Psyr_5085	0.74	+1.0
6,033,072	-		Psyr_5085	0.74	+0.1
6,033,072	-		Psyr_5085	0.74	+0.4
6,033,072	-		Psyr_5085	0.74	+0.4
6,033,078	-		Psyr_5085	0.75	-0.3
6,033,424	+				-1.2
6,033,424	+				-1.7
6,033,425	-				-0.5
6,033,446	+				+1.5
6,033,452	+				-1.2
6,033,453	-				-0.6
6,033,483	-				+0.1
6,033,549	+				+0.2
6,033,549	+				+1.1
6,033,549	+				+0.2
6,033,549	+				+0.1
6,033,549	+				+0.4
6,033,549	+				+0.3
6,033,549	+				-0.8
6,033,550	-				-1.3
6,033,550	-				-0.8
6,033,550	-				-0.0
6,033,550	-				+0.2
6,033,550	-				-1.1
6,033,579	+				-2.3
6,033,579	+				+1.6
6,033,580	-				+0.6
6,033,580	-				+0.5
6,033,580	-				-0.7
6,033,580	-				+0.5
6,033,580	-				+0.5
6,033,745	-				-0.5
6,033,774	+				-0.9
6,033,774	+				-0.4
6,033,774	+				-0.5
6,033,775	-				-0.9
6,033,775	-				+0.2
6,033,775	-				-0.2
6,033,903	-				+0.7
6,033,903	-				+0.9
6,033,907	-				-0.3
6,033,907	-				-0.1
6,033,907	-				-0.2
6,033,907	-				+0.1
6,033,935	+				-0.1
6,033,935	+				-1.5
6,033,935	+				+0.1
6,033,935	+				+0.3
6,033,936	-				-1.7
6,033,936	-				-0.6
6,033,936	-				+0.5
6,033,936	-				+2.6
6,033,936	-				-0.7
6,033,936	-				-0.5
6,033,937	+				+1.4
6,033,937	+				+3.4
6,033,937	+				+1.0
6,033,937	+				-0.5
6,033,937	+				-0.5
6,033,937	+				-1.4
6,033,937	+				-0.4
6,033,937	+				-0.0
6,033,937	+				-1.2
6,033,937	+				-1.9
6,033,937	+				-1.1
6,033,937	+				+0.4
6,033,937	+				+1.1
6,033,937	+				+0.3
6,033,937	+				+0.6
6,033,937	+				+0.1
6,033,937	+				-0.2
6,033,937	+				-1.6
6,033,938	-				+0.8
6,033,938	-				-0.1
6,033,938	-				-0.2
6,033,938	-				+0.1
6,033,938	-				+0.5
6,033,938	-				-1.0
6,033,938	-				+0.1
6,033,938	-				+0.1
6,033,938	-				+0.1
6,033,938	-				+0.2
6,033,938	-				-0.7
6,033,938	-				-1.0
6,033,938	-				-0.2
6,033,938	-				+0.0
6,033,938	-				-0.4
6,033,938	-				+0.3
6,033,938	-				-0.5
6,034,028	+				+0.1
6,034,056	+				+1.4
6,034,057	-				+1.0
6,034,057	-				+0.9
6,034,057	-				-0.5
6,034,057	-				+0.2
6,034,205	+				-1.9
6,034,205	+				-0.0
6,034,206	-				+1.2
6,034,206	-				-0.4
6,034,206	-				-0.1
6,034,206	-				+0.1
6,034,206	-				-1.3
6,034,238	+				-0.3
6,034,238	+				+0.9
6,034,238	+				+1.1
6,034,238	+				-1.1
6,034,238	+				+0.4
6,034,238	+				-0.8
6,034,238	+				+1.1
6,034,238	+				-0.2
6,034,239	-				-0.1
6,034,239	-				+0.2
6,034,446	-		Psyr_5086	0.26	-0.9