Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4273

Experiment: MBOA 1.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 1.2 mM
5,096,087	+		Psyr_4271	0.62	-0.6
5,096,087	+		Psyr_4271	0.62	+0.2
5,096,087	+		Psyr_4271	0.62	+0.5
5,096,087	+		Psyr_4271	0.62	-0.1
5,096,088	-		Psyr_4271	0.62	+0.8
5,096,088	-		Psyr_4271	0.62	+1.0
5,096,199	+		Psyr_4271	0.74	-0.4
5,096,199	+		Psyr_4271	0.74	-0.5
5,096,200	-		Psyr_4271	0.74	+0.8
5,096,216	+		Psyr_4271	0.75	+0.2
5,096,216	+		Psyr_4271	0.75	+0.2
5,096,216	+		Psyr_4271	0.75	+0.5
5,096,216	+		Psyr_4271	0.75	-0.2
5,096,217	-		Psyr_4271	0.75	+0.1
5,096,284	+		Psyr_4271	0.82	-1.1
5,096,285	-		Psyr_4271	0.82	-0.8
5,096,457	+				-1.3
5,096,620	+		Psyr_4272	0.34	+0.3
5,096,620	+		Psyr_4272	0.34	+1.9
5,096,620	+		Psyr_4272	0.34	+1.9
5,096,620	+		Psyr_4272	0.34	-0.6
5,096,620	+		Psyr_4272	0.34	+0.1
5,096,621	-		Psyr_4272	0.34	+0.1
5,096,621	-		Psyr_4272	0.34	-1.3
5,096,621	-		Psyr_4272	0.34	+0.6
5,096,621	-		Psyr_4272	0.34	-0.8
5,096,668	+		Psyr_4272	0.58	+0.6
5,096,668	+		Psyr_4272	0.58	-0.5
5,096,668	+		Psyr_4272	0.58	-0.9
5,096,668	+		Psyr_4272	0.58	+0.2
5,096,668	+		Psyr_4272	0.58	+0.3
5,096,668	+		Psyr_4272	0.58	-0.5
5,096,668	+		Psyr_4272	0.58	+0.9
5,096,668	+		Psyr_4272	0.58	-0.3
5,096,668	+		Psyr_4272	0.58	+0.3
5,096,669	-		Psyr_4272	0.59	+1.2
5,096,669	-		Psyr_4272	0.59	-0.4
5,096,669	-		Psyr_4272	0.59	-0.2
5,096,669	-		Psyr_4272	0.59	-1.2
5,096,669	-		Psyr_4272	0.59	-0.5
5,096,669	-		Psyr_4272	0.59	+1.9
5,096,677	+		Psyr_4272	0.63	-1.2
5,096,677	+		Psyr_4272	0.63	-0.0
5,096,677	+		Psyr_4272	0.63	+0.8
5,096,719	+		Psyr_4272	0.84	-0.3
5,096,720	-		Psyr_4272	0.84	+0.2
5,096,720	-		Psyr_4272	0.84	+1.7
5,096,720	-		Psyr_4272	0.84	-0.9
5,096,864	+				+1.2
5,096,864	+				+0.3
5,096,872	+				+0.0
5,096,873	-				-0.3
5,096,930	-				-0.7
5,097,010	+		Psyr_4273	0.11	+0.9
5,097,011	-		Psyr_4273	0.11	+1.3
5,097,011	-		Psyr_4273	0.11	-0.5
5,097,036	+		Psyr_4273	0.12	+0.6
5,097,127	+		Psyr_4273	0.17	+0.1
5,097,127	+		Psyr_4273	0.17	-1.1
5,097,128	-		Psyr_4273	0.17	-0.4
5,097,128	-		Psyr_4273	0.17	+0.4
5,097,224	+		Psyr_4273	0.21	-0.9
5,097,224	+		Psyr_4273	0.21	+0.1
5,097,224	+		Psyr_4273	0.21	-1.5
5,097,225	-		Psyr_4273	0.22	-1.6
5,097,225	-		Psyr_4273	0.22	+0.2
5,097,225	-		Psyr_4273	0.22	-1.3
5,097,225	-		Psyr_4273	0.22	-0.9
5,097,260	-		Psyr_4273	0.23	-0.4
5,097,268	+		Psyr_4273	0.24	+0.1
5,097,446	-		Psyr_4273	0.32	-0.1
5,097,676	+		Psyr_4273	0.43	+0.6
5,097,676	+		Psyr_4273	0.43	-0.0
5,097,677	-		Psyr_4273	0.43	-2.6
5,097,677	-		Psyr_4273	0.43	-0.2
5,097,760	+		Psyr_4273	0.47	-0.9
5,097,761	-		Psyr_4273	0.47	-0.8
5,098,004	-		Psyr_4273	0.59	+0.2
5,098,004	-		Psyr_4273	0.59	-0.1
5,098,004	-		Psyr_4273	0.59	-1.4
5,098,004	-		Psyr_4273	0.59	-0.1
5,098,210	+		Psyr_4273	0.69	+1.4
5,098,210	+		Psyr_4273	0.69	-0.8
5,098,210	+		Psyr_4273	0.69	+0.5
5,098,210	+		Psyr_4273	0.69	-0.8
5,098,210	+		Psyr_4273	0.69	-0.5
5,098,211	-		Psyr_4273	0.69	-0.4
5,098,211	-		Psyr_4273	0.69	-1.7
5,098,211	-		Psyr_4273	0.69	+1.1
5,098,217	+		Psyr_4273	0.69	+0.4
5,098,217	+		Psyr_4273	0.69	+0.4
5,098,217	+		Psyr_4273	0.69	-1.0
5,098,218	-		Psyr_4273	0.69	-0.9
5,098,218	-		Psyr_4273	0.69	+0.8
5,098,219	+		Psyr_4273	0.69	-0.5
5,098,219	+		Psyr_4273	0.69	-0.5
5,098,219	+		Psyr_4273	0.69	-1.6
5,098,219	+		Psyr_4273	0.69	-0.3
5,098,219	+		Psyr_4273	0.69	-0.7
5,098,219	+		Psyr_4273	0.69	-0.3
5,098,219	+		Psyr_4273	0.69	+0.1
5,098,219	+		Psyr_4273	0.69	+0.2
5,098,219	+		Psyr_4273	0.69	-0.8
5,098,219	+		Psyr_4273	0.69	+0.1
5,098,219	+		Psyr_4273	0.69	-1.3
5,098,219	+		Psyr_4273	0.69	+0.3
5,098,219	+		Psyr_4273	0.69	-1.1
5,098,220	-		Psyr_4273	0.69	-0.5
5,098,220	-		Psyr_4273	0.69	+1.0
5,098,220	-		Psyr_4273	0.69	-1.1
5,098,220	-		Psyr_4273	0.69	+0.5
5,098,220	-		Psyr_4273	0.69	-0.3
5,098,220	-		Psyr_4273	0.69	+0.3
5,098,220	-		Psyr_4273	0.69	+0.0
5,098,220	-		Psyr_4273	0.69	-0.3
5,098,220	-		Psyr_4273	0.69	-1.2
5,098,220	-		Psyr_4273	0.69	-0.6
5,098,220	-		Psyr_4273	0.69	-1.5
5,098,220	-		Psyr_4273	0.69	-2.1
5,098,220	-		Psyr_4273	0.69	-0.7
5,098,220	-		Psyr_4273	0.69	-1.1
5,098,220	-		Psyr_4273	0.69	-0.4
5,098,220	-		Psyr_4273	0.69	-0.5
5,098,220	-		Psyr_4273	0.69	-0.3
5,098,220	-		Psyr_4273	0.69	-0.7
5,098,373	+		Psyr_4273	0.77	-0.3
5,098,508	-		Psyr_4273	0.83	-0.9
5,098,606	+		Psyr_4273	0.88	-0.5
5,098,606	+		Psyr_4273	0.88	+0.2
5,098,606	+		Psyr_4273	0.88	-1.8
5,098,606	+		Psyr_4273	0.88	+0.2
5,098,606	+		Psyr_4273	0.88	+0.2
5,098,607	-		Psyr_4273	0.88	+0.4
5,098,607	-		Psyr_4273	0.88	+0.6
5,098,607	-		Psyr_4273	0.88	+1.3
5,098,607	-		Psyr_4273	0.88	+1.1
5,098,607	-		Psyr_4273	0.88	+0.7
5,098,607	-		Psyr_4273	0.88	-0.5
5,098,607	-		Psyr_4273	0.88	-0.4
5,098,607	-		Psyr_4273	0.88	-0.9
5,098,690	+				-0.4
5,098,690	+				-1.6
5,098,690	+				-0.9
5,098,690	+				-0.6
5,098,690	+				+0.0
5,098,690	+				-0.3
5,098,690	+				+0.7
5,098,691	-				-2.7
5,098,691	-				-0.4
5,098,691	-				+0.1
5,098,691	-				+0.2
5,098,691	-				+0.6
5,098,711	+				+1.2
5,098,711	+				+1.0
5,098,711	+				+0.9
5,098,711	+				+1.2
5,098,711	+				+0.3
5,098,711	+				-1.2
5,098,711	+				+0.9
5,098,711	+				+0.9
5,098,712	-				-0.4
5,098,712	-				-1.1
5,098,712	-				+0.9
5,098,712	-				-0.7
5,098,712	-				-0.0
5,098,712	-				-1.9
5,098,712	-				-0.2
5,098,712	-				-1.5
5,098,712	-				+0.5
5,098,712	-				+0.2
5,098,712	-				-0.1
5,098,715	+				-2.0
5,098,715	+				+0.2
5,098,715	+				+0.3
5,098,715	+				-0.8
5,098,715	+				-0.5
5,098,715	+				+0.7
5,098,715	+				-0.3
5,098,715	+				-0.5
5,098,715	+				-0.3
5,098,715	+				-0.4
5,098,715	+				-0.3
5,098,716	-				-0.6
5,098,716	-				+0.3
5,098,716	-				-0.8
5,098,716	-				-0.8
5,098,716	-				+0.2
5,098,716	-				-0.2
5,098,716	-				-1.1
5,098,716	-				-1.3
5,098,716	-				-2.3
5,098,716	-				-0.3
5,098,716	-				-0.5
5,098,716	-				+0.3
5,098,716	-				-0.4
5,098,716	-				+0.2
5,098,716	-				-0.7
5,098,716	-				-0.4
5,098,719	+				-0.2
5,098,720	-				-0.3
5,098,839	-				-1.3
5,098,839	-				+1.1
5,098,841	+				-1.0
5,098,841	+				+0.4
5,098,844	+				-0.3
5,098,844	+				+0.3
5,098,877	+				-0.1
5,098,877	+				+0.2
5,098,877	+				-0.9
5,098,877	+				+0.9
5,098,877	+				+1.2
5,098,878	-				+0.8
5,098,938	+				-0.4
5,098,938	+				-0.2
5,098,938	+				-0.3
5,098,939	-				-0.3
5,098,976	+				-2.6
5,099,042	+				+0.6
5,099,042	+				-1.3
5,099,058	+				+0.6
5,099,059	-				+0.7
5,099,088	+				+0.1
5,099,339	+		Psyr_4274	0.54	+0.5
5,099,339	+		Psyr_4274	0.54	-0.2
5,099,339	+		Psyr_4274	0.54	+0.2
5,099,339	+		Psyr_4274	0.54	-0.9
5,099,339	+		Psyr_4274	0.54	+0.8
5,099,339	+		Psyr_4274	0.54	+0.1
5,099,339	+		Psyr_4274	0.54	-0.5
5,099,339	+		Psyr_4274	0.54	-2.1
5,099,339	+		Psyr_4274	0.54	-0.1
5,099,339	+		Psyr_4274	0.54	-0.1
5,099,339	+		Psyr_4274	0.54	+0.1
5,099,339	+		Psyr_4274	0.54	+1.0
5,099,339	+		Psyr_4274	0.54	+0.7
5,099,339	+		Psyr_4274	0.54	+0.7
5,099,339	+		Psyr_4274	0.54	+0.4
5,099,339	+		Psyr_4274	0.54	+1.5
5,099,340	-		Psyr_4274	0.55	+0.3
5,099,340	-		Psyr_4274	0.55	-0.5
5,099,340	-		Psyr_4274	0.55	-0.6
5,099,340	-		Psyr_4274	0.55	-0.1
5,099,340	-		Psyr_4274	0.55	-0.5
5,099,340	-		Psyr_4274	0.55	-1.9
5,099,340	-		Psyr_4274	0.55	-0.5
5,099,340	-		Psyr_4274	0.55	+1.7
5,099,340	-		Psyr_4274	0.55	+0.3
5,099,340	-		Psyr_4274	0.55	-1.7
5,099,340	-		Psyr_4274	0.55	-0.4
5,099,340	-		Psyr_4274	0.55	-0.2
5,099,514	+				-1.0
5,099,514	+				-0.9