Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5104

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
6,054,651	+				+1.5
6,054,651	+				-0.3
6,054,652	-				-0.0
6,054,652	-				+0.3
6,054,652	-				-0.0
6,054,652	-				-0.3
6,054,850	-		Psyr_5103	0.25	+0.4
6,054,850	-		Psyr_5103	0.25	+0.6
6,054,883	+		Psyr_5103	0.29	+0.8
6,054,884	-		Psyr_5103	0.29	-1.3
6,054,884	-		Psyr_5103	0.29	+0.2
6,054,887	+		Psyr_5103	0.29	+0.3
6,054,887	+		Psyr_5103	0.29	+0.9
6,054,887	+		Psyr_5103	0.29	+0.8
6,054,888	-		Psyr_5103	0.29	+0.4
6,054,929	+		Psyr_5103	0.33	+0.3
6,054,929	+		Psyr_5103	0.33	+1.7
6,054,930	-		Psyr_5103	0.34	+0.3
6,054,930	-		Psyr_5103	0.34	+1.6
6,054,930	-		Psyr_5103	0.34	-1.3
6,054,930	-		Psyr_5103	0.34	+0.5
6,054,947	+		Psyr_5103	0.35	+0.4
6,054,947	+		Psyr_5103	0.35	-1.3
6,054,948	-		Psyr_5103	0.35	-0.4
6,054,948	-		Psyr_5103	0.35	-1.4
6,054,948	-		Psyr_5103	0.35	-0.4
6,055,010	+		Psyr_5103	0.42	-0.6
6,055,010	+		Psyr_5103	0.42	+0.8
6,055,011	-		Psyr_5103	0.42	+0.6
6,055,039	-		Psyr_5103	0.45	+0.3
6,055,039	-		Psyr_5103	0.45	-0.6
6,055,039	-		Psyr_5103	0.45	+0.5
6,055,073	+		Psyr_5103	0.49	-1.0
6,055,074	-		Psyr_5103	0.49	-0.5
6,055,074	-		Psyr_5103	0.49	-0.5
6,055,306	-		Psyr_5103	0.73	-0.9
6,055,466	+		Psyr_5103	0.90	+1.5
6,055,466	+		Psyr_5103	0.90	-0.1
6,055,467	-				+1.0
6,055,481	+				+0.6
6,055,481	+				-0.5
6,055,482	-				+0.4
6,055,482	-				-0.3
6,055,482	-				-2.3
6,055,482	-				+0.2
6,055,482	-				-0.9
6,055,778	+		Psyr_5104	0.21	+0.8
6,055,778	+		Psyr_5104	0.21	-0.1
6,055,778	+		Psyr_5104	0.21	-0.9
6,055,779	-		Psyr_5104	0.21	-1.7
6,055,782	+		Psyr_5104	0.21	-0.6
6,055,782	+		Psyr_5104	0.21	-0.7
6,055,782	+		Psyr_5104	0.21	-1.4
6,055,782	+		Psyr_5104	0.21	-1.0
6,055,783	-		Psyr_5104	0.22	-0.5
6,055,783	-		Psyr_5104	0.22	-0.5
6,056,216	+		Psyr_5104	0.63	-2.2
6,056,216	+		Psyr_5104	0.63	-0.8
6,056,313	+		Psyr_5104	0.72	-1.0
6,056,313	+		Psyr_5104	0.72	-1.4
6,056,357	+		Psyr_5104	0.77	-1.0
6,056,357	+		Psyr_5104	0.77	+0.8
6,056,545	-				-0.9
6,056,653	+				+1.8
6,056,653	+				+0.6
6,056,653	+				-0.4
6,056,653	+				+0.3
6,056,654	-				+1.2
6,056,654	-				+0.3
6,056,654	-				-1.0
6,056,681	+				+0.4
6,056,691	-				-0.1
6,056,691	-				+0.4
6,056,699	+				-1.6
6,056,699	+				+0.4
6,056,700	-				-0.2
6,056,714	-				+0.3
6,056,814	-				+1.2
6,056,824	+				+0.8
6,056,824	+				+0.2
6,056,825	-				-0.4
6,056,850	+				-0.5
6,056,850	+				+0.5
6,056,851	-				-0.1
6,056,851	-				+0.3
6,056,857	+				+0.1
6,056,913	+		Psyr_5105	0.11	-0.7
6,056,913	+		Psyr_5105	0.11	-1.4
6,056,913	+		Psyr_5105	0.11	-1.2
6,056,913	+		Psyr_5105	0.11	+0.0
6,056,913	+		Psyr_5105	0.11	+1.1
6,056,913	+		Psyr_5105	0.11	-0.4
6,056,913	+		Psyr_5105	0.11	+1.0
6,056,913	+		Psyr_5105	0.11	+1.3
6,056,913	+		Psyr_5105	0.11	-0.1
6,056,913	+		Psyr_5105	0.11	-0.4
6,056,913	+		Psyr_5105	0.11	-0.8
6,056,913	+		Psyr_5105	0.11	-0.6
6,056,914	-		Psyr_5105	0.11	-0.5
6,056,914	-		Psyr_5105	0.11	-0.7
6,056,914	-		Psyr_5105	0.11	-0.2
6,056,914	-		Psyr_5105	0.11	-0.2
6,056,914	-		Psyr_5105	0.11	+0.0
6,056,914	-		Psyr_5105	0.11	-0.7
6,056,914	-		Psyr_5105	0.11	+0.0
6,056,914	-		Psyr_5105	0.11	-0.4
6,056,914	-		Psyr_5105	0.11	+0.3
6,056,914	-		Psyr_5105	0.11	+0.8
6,056,914	-		Psyr_5105	0.11	-0.5
6,056,914	-		Psyr_5105	0.11	+0.1
6,056,914	-		Psyr_5105	0.11	-1.4
6,056,914	-		Psyr_5105	0.11	+1.8
6,056,920	+		Psyr_5105	0.11	-0.6
6,056,997	+		Psyr_5105	0.17	+0.3
6,056,998	-		Psyr_5105	0.17	-0.1
6,056,998	-		Psyr_5105	0.17	-0.1
6,056,998	-		Psyr_5105	0.17	+0.3
6,056,998	-		Psyr_5105	0.17	-0.7
6,056,998	-		Psyr_5105	0.17	+0.7
6,057,041	-		Psyr_5105	0.20	-0.6
6,057,186	+		Psyr_5105	0.31	+2.4
6,057,186	+		Psyr_5105	0.31	+1.2
6,057,186	+		Psyr_5105	0.31	+0.2
6,057,186	+		Psyr_5105	0.31	-3.8
6,057,186	+		Psyr_5105	0.31	-0.4
6,057,186	+		Psyr_5105	0.31	+0.1
6,057,187	-		Psyr_5105	0.31	+0.5
6,057,187	-		Psyr_5105	0.31	+1.3
6,057,187	-		Psyr_5105	0.31	+1.0
6,057,187	-		Psyr_5105	0.31	+0.8
6,057,289	+				+2.4
6,057,290	-		Psyr_5105	0.39	-0.0
6,057,338	+		Psyr_5105	0.42	+1.7
6,057,338	+		Psyr_5105	0.42	+1.3
6,057,338	+		Psyr_5105	0.42	+0.8
6,057,338	+		Psyr_5105	0.42	-0.9
6,057,338	+		Psyr_5105	0.42	+1.2
6,057,338	+		Psyr_5105	0.42	-0.2
6,057,338	+		Psyr_5105	0.42	+0.4
6,057,338	+		Psyr_5105	0.42	-0.7
6,057,338	+		Psyr_5105	0.42	+0.5
6,057,339	-		Psyr_5105	0.43	-0.9
6,057,339	-		Psyr_5105	0.43	+0.4
6,057,339	-		Psyr_5105	0.43	-1.2
6,057,339	-		Psyr_5105	0.43	+0.1
6,057,339	-		Psyr_5105	0.43	-0.7
6,057,339	-		Psyr_5105	0.43	-0.8
6,057,339	-		Psyr_5105	0.43	-0.2
6,057,339	-		Psyr_5105	0.43	-0.8
6,057,407	+		Psyr_5105	0.48	+0.3
6,057,407	+		Psyr_5105	0.48	-0.4
6,057,407	+		Psyr_5105	0.48	-1.4
6,057,407	+		Psyr_5105	0.48	+0.8
6,057,408	-		Psyr_5105	0.48	-0.5
6,057,408	-		Psyr_5105	0.48	+1.3
6,057,408	-		Psyr_5105	0.48	-1.4
6,057,489	+		Psyr_5105	0.54	-0.8
6,057,489	+		Psyr_5105	0.54	+0.7
6,057,489	+		Psyr_5105	0.54	+2.3
6,057,489	+		Psyr_5105	0.54	-0.5
6,057,489	+		Psyr_5105	0.54	-0.5
6,057,489	+		Psyr_5105	0.54	-0.3
6,057,489	+		Psyr_5105	0.54	-1.8
6,057,489	+		Psyr_5105	0.54	-1.0
6,057,489	+		Psyr_5105	0.54	+0.2
6,057,490	-		Psyr_5105	0.54	+1.5
6,057,490	-		Psyr_5105	0.54	-0.3
6,057,490	-		Psyr_5105	0.54	+1.1
6,057,490	-		Psyr_5105	0.54	-3.5
6,057,490	-		Psyr_5105	0.54	-1.3
6,057,490	-		Psyr_5105	0.54	-1.0
6,057,490	-		Psyr_5105	0.54	-0.0
6,057,490	-		Psyr_5105	0.54	+0.2
6,057,490	-		Psyr_5105	0.54	+0.6
6,057,490	-		Psyr_5105	0.54	-1.0