Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5091

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
6,039,524	+		Psyr_5090	0.25	-3.8
6,039,524	+		Psyr_5090	0.25	-1.3
6,039,524	+		Psyr_5090	0.25	-3.2
6,039,524	+		Psyr_5090	0.25	-1.4
6,039,524	+		Psyr_5090	0.25	-4.2
6,039,524	+		Psyr_5090	0.25	-4.1
6,039,524	+		Psyr_5090	0.25	-2.8
6,039,525	-		Psyr_5090	0.25	-1.1
6,039,525	-		Psyr_5090	0.25	-3.9
6,039,525	-		Psyr_5090	0.25	-0.3
6,039,567	+		Psyr_5090	0.28	-4.8
6,039,567	+		Psyr_5090	0.28	-2.3
6,039,567	+		Psyr_5090	0.28	-3.2
6,039,567	+		Psyr_5090	0.28	-4.3
6,039,567	+		Psyr_5090	0.28	-2.1
6,039,568	-		Psyr_5090	0.28	-2.0
6,039,568	-				-1.5
6,039,610	+		Psyr_5090	0.32	-2.2
6,039,610	+		Psyr_5090	0.32	-4.7
6,039,611	-		Psyr_5090	0.32	-0.7
6,039,613	-		Psyr_5090	0.32	-0.5
6,039,751	-		Psyr_5090	0.43	+0.9
6,039,751	-		Psyr_5090	0.43	-2.3
6,039,751	-		Psyr_5090	0.43	-4.1
6,039,793	+		Psyr_5090	0.46	-2.9
6,039,793	+		Psyr_5090	0.46	-4.8
6,040,376	+				-2.8
6,040,376	+				-2.1
6,040,376	+				-4.4
6,040,377	-				-3.1
6,040,469	+				-2.8
6,040,469	+				-1.9
6,040,469	+				-3.0
6,040,470	-				-3.8
6,040,470	-				-2.5
6,040,514	+				-4.3
6,040,514	+				-4.0
6,040,514	+				-2.3
6,040,665	+				-3.0
6,040,665	+				-4.7
6,040,665	+				-3.0
6,040,665	+				-4.0
6,040,665	+				-3.7
6,040,665	+				-4.4
6,040,665	+				-3.0
6,040,665	+				-3.0
6,040,665	+				-3.0
6,040,665	+				-3.8
6,040,666	-				-2.9
6,040,666	-				-2.8
6,040,666	-				-2.5
6,040,666	-				-3.6
6,040,666	-				-4.4
6,040,666	-				-3.6
6,040,666	-				-4.6
6,040,666	-				-2.7
6,040,666	-				-1.1
6,040,666	-				-2.5
6,040,666	-				-1.6
6,040,666	-				-4.3
6,040,666	-				-1.0
6,040,666	-				-1.7
6,040,666	-				-2.7
6,040,666	-				-2.7
6,040,666	-				-4.4
6,040,726	+		Psyr_5091	0.12	-4.4
6,040,773	+		Psyr_5091	0.14	-2.5
6,040,773	+		Psyr_5091	0.14	-1.3
6,040,773	+		Psyr_5091	0.14	-3.9
6,040,773	+		Psyr_5091	0.14	-4.0
6,040,773	+		Psyr_5091	0.14	-4.2
6,040,773	+		Psyr_5091	0.14	-4.0
6,040,773	+		Psyr_5091	0.14	-3.8
6,040,773	+		Psyr_5091	0.14	-3.4
6,040,773	+		Psyr_5091	0.14	-3.4
6,040,773	+		Psyr_5091	0.14	-5.5
6,040,774	-		Psyr_5091	0.14	-4.4
6,040,774	-		Psyr_5091	0.14	-4.5
6,040,774	-		Psyr_5091	0.14	-1.3
6,040,774	-		Psyr_5091	0.14	-2.5
6,040,774	-		Psyr_5091	0.14	-3.4
6,040,774	-		Psyr_5091	0.14	-2.9
6,040,774	-		Psyr_5091	0.14	-2.2
6,040,774	-		Psyr_5091	0.14	-2.8
6,040,774	-		Psyr_5091	0.14	-2.7
6,040,774	-		Psyr_5091	0.14	-3.1
6,040,774	-		Psyr_5091	0.14	-3.0
6,040,774	-		Psyr_5091	0.14	-3.3
6,040,774	-		Psyr_5091	0.14	-3.0
6,040,774	-		Psyr_5091	0.14	-1.7
6,040,902	+		Psyr_5091	0.22	-3.5
6,040,902	+		Psyr_5091	0.22	-4.1
6,040,902	+		Psyr_5091	0.22	-2.7
6,040,902	+		Psyr_5091	0.22	-2.9
6,040,902	+		Psyr_5091	0.22	-2.4
6,040,902	+		Psyr_5091	0.22	-3.9
6,040,902	+		Psyr_5091	0.22	-0.4
6,040,902	+		Psyr_5091	0.22	-4.2
6,040,902	+		Psyr_5091	0.22	-4.6
6,040,903	-		Psyr_5091	0.22	-2.8
6,040,903	-		Psyr_5091	0.22	-4.7
6,040,903	-		Psyr_5091	0.22	-0.3
6,040,903	-		Psyr_5091	0.22	-5.2
6,040,903	-		Psyr_5091	0.22	-3.7
6,040,903	-		Psyr_5091	0.22	-1.8
6,040,903	-		Psyr_5091	0.22	-1.0
6,040,903	-		Psyr_5091	0.22	-1.8
6,041,114	+		Psyr_5091	0.34	-3.6
6,041,115	-		Psyr_5091	0.34	-2.9
6,041,115	-		Psyr_5091	0.34	-3.9
6,041,115	-		Psyr_5091	0.34	-2.2
6,041,205	+		Psyr_5091	0.39	-2.4
6,041,205	+		Psyr_5091	0.39	-3.1
6,041,205	+		Psyr_5091	0.39	-4.4
6,041,205	+		Psyr_5091	0.39	-3.7
6,041,400	+		Psyr_5091	0.50	-3.2
6,041,400	+		Psyr_5091	0.50	-1.9
6,041,400	+		Psyr_5091	0.50	-2.7
6,041,400	+		Psyr_5091	0.50	-1.0
6,041,400	+		Psyr_5091	0.50	-1.5
6,041,400	+		Psyr_5091	0.50	-1.3
6,041,400	+		Psyr_5091	0.50	-1.0
6,041,400	+		Psyr_5091	0.50	-3.2
6,041,400	+		Psyr_5091	0.50	-3.2
6,041,400	+		Psyr_5091	0.50	-4.4
6,041,401	-		Psyr_5091	0.50	-1.8
6,041,401	-		Psyr_5091	0.50	+0.0
6,041,401	-		Psyr_5091	0.50	-0.5
6,041,401	-		Psyr_5091	0.50	-0.5
6,041,401	-		Psyr_5091	0.50	-3.9
6,041,401	-		Psyr_5091	0.50	-3.7
6,041,401	-		Psyr_5091	0.50	-3.5
6,041,401	-		Psyr_5091	0.50	-4.2
6,041,493	+		Psyr_5091	0.55	+0.0
6,041,493	+		Psyr_5091	0.55	-3.0
6,041,494	-		Psyr_5091	0.55	-4.8
6,041,494	-		Psyr_5091	0.55	-3.4
6,041,691	-		Psyr_5091	0.67	-2.9
6,041,716	+		Psyr_5091	0.68	+1.0
6,041,716	+		Psyr_5091	0.68	-3.4
6,041,717	-		Psyr_5091	0.68	-2.0
6,041,726	+		Psyr_5091	0.69	-1.9
6,041,735	+		Psyr_5091	0.69	-1.4
6,041,780	-		Psyr_5091	0.72	-4.9
6,041,793	+		Psyr_5091	0.72	-4.2
6,041,794	-		Psyr_5091	0.72	-4.4
6,041,956	+		Psyr_5091	0.82	-1.7
6,042,010	+		Psyr_5091	0.85	+1.0
6,042,011	-		Psyr_5091	0.85	-3.3
6,042,011	-		Psyr_5091	0.85	-3.7
6,042,043	+		Psyr_5091	0.87	-4.2
6,042,043	+		Psyr_5091	0.87	-5.0
6,042,043	+		Psyr_5091	0.87	-4.1
6,042,044	-		Psyr_5091	0.87	-4.0
6,042,044	-		Psyr_5091	0.87	-4.7
6,042,044	-		Psyr_5091	0.87	-2.7
6,042,044	-		Psyr_5091	0.87	-3.4
6,042,044	-		Psyr_5091	0.87	-1.6
6,042,044	-		Psyr_5091	0.87	-2.0
6,042,044	-		Psyr_5091	0.87	-2.2
6,042,044	-		Psyr_5091	0.87	-5.0
6,042,044	-		Psyr_5091	0.87	-4.6
6,042,044	-		Psyr_5091	0.87	-5.0
6,042,052	+		Psyr_5091	0.87	-1.8
6,042,052	+		Psyr_5091	0.87	-1.8
6,042,053	-		Psyr_5091	0.87	-5.2
6,042,053	-		Psyr_5091	0.87	-4.0
6,042,053	-		Psyr_5091	0.87	-2.7
6,042,053	-		Psyr_5091	0.87	-5.6
6,042,053	-		Psyr_5091	0.87	-3.2
6,042,053	-		Psyr_5091	0.87	-2.0
6,042,066	+		Psyr_5091	0.88	-2.9
6,042,109	+				-2.6
6,042,109	+				-1.3
6,042,109	+				-4.1
6,042,110	-				-4.0
6,042,110	-				-2.9
6,042,110	-				-2.5
6,042,110	-				-3.1
6,042,110	-				-2.7
6,042,110	-				-4.0
6,042,110	-				-4.1
6,042,110	-				-3.5
6,042,110	-				-1.8
6,042,147	+				-2.4
6,042,147	+				-3.9
6,042,147	+				-1.6
6,042,147	+				-3.0
6,042,147	+				-3.9
6,042,148	-				-3.2
6,042,148	-				-5.5
6,042,148	-				-2.5
6,042,205	-				-2.8
6,042,205	-				-4.0
6,042,253	+				-3.4
6,042,267	-				-4.0
6,042,322	-				-3.5
6,042,353	+				-3.4
6,042,354	-				-2.5
6,042,354	-				-2.0
6,042,368	-				-0.5
6,042,371	-				-2.0
6,042,371	-				-2.4
6,042,379	+				-3.9
6,042,390	-				-3.5
6,042,397	-				-3.3
6,042,416	+				-2.4
6,042,416	+				-1.9
6,042,417	-				-2.0
6,042,428	+				+0.5
6,042,432	+				-4.1
6,042,432	+				-1.8
6,042,433	-				-2.5
6,042,463	-				-4.5
6,042,463	-				-2.9
6,042,464	+				-2.5
6,042,464	+				-4.5
6,042,464	+				-3.0
6,042,464	+				-2.8
6,042,464	+				-2.3
6,042,465	-				-1.3
6,042,465	-				-1.3
6,042,466	+				-1.8
6,042,466	+				-1.8
6,042,466	+				-2.3
6,042,466	+				-3.4
6,042,467	-				-4.1
6,042,474	+				-3.9
6,042,474	+				-3.2
6,042,475	-				-1.3
6,042,477	-				-1.7
6,042,480	+				-2.7
6,042,480	+				-4.8
6,042,481	-				-0.1
6,042,481	-				+0.0
6,042,481	-				-0.0
6,042,481	-				+0.7
6,042,482	+				-1.3
6,042,482	+				-2.3
6,042,483	-				+0.2
6,042,483	-				-0.3
6,042,484	+				-3.8
6,042,484	+				-2.1
6,042,484	+				-0.2
6,042,485	-				-1.0
6,042,512	+				-3.0
6,042,522	-				-1.0
6,042,522	-				-0.2
6,042,566	-				-0.8
6,042,575	+				-2.3
6,042,575	+				-2.4
6,042,851	+				-0.5
6,042,852	-				-0.5
6,042,852	-				+0.9