Experiment: MBOA 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4585 and Psyr_4586 are separated by 148 nucleotides Psyr_4586 and Psyr_4587 overlap by 13 nucleotides Psyr_4587 and Psyr_4588 overlap by 11 nucleotides Psyr_4588 and Psyr_4589 overlap by 4 nucleotides Psyr_4589 and Psyr_4590 overlap by 4 nucleotides
Psyr_4585: Psyr_4585 - hypothetical protein, at 5,445,804 to 5,447,126
_4585
Psyr_4586: Psyr_4586 - tail protein, putative, at 5,447,275 to 5,447,874
_4586
Psyr_4587: Psyr_4587 - Baseplate J-like protein, at 5,447,862 to 5,448,902
_4587
Psyr_4588: Psyr_4588 - Phage GP46, at 5,448,892 to 5,449,290
_4588
Psyr_4589: Psyr_4589 - Phage baseplate assembly protein V, at 5,449,287 to 5,449,799
_4589
Psyr_4590: Psyr_4590 - Bacteriophage Mu P, at 5,449,796 to 5,450,923
_4590
Position (kb) 5447
5448
5449 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.889 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.911 kb on + strand, within Psyr_4585 at 5446.911 kb on + strand, within Psyr_4585 at 5446.917 kb on + strand, within Psyr_4585 at 5446.917 kb on + strand, within Psyr_4585 at 5446.918 kb on - strand, within Psyr_4585 at 5447.035 kb on + strand at 5447.036 kb on - strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.157 kb on - strand at 5447.175 kb on - strand at 5447.175 kb on - strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.212 kb on - strand at 5447.236 kb on - strand at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.553 kb on - strand, within Psyr_4586 at 5447.846 kb on + strand at 5447.847 kb on - strand at 5447.863 kb on + strand at 5447.864 kb on - strand at 5447.864 kb on - strand at 5448.098 kb on - strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.166 kb on + strand, within Psyr_4587 at 5448.166 kb on + strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.295 kb on - strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.574 kb on + strand, within Psyr_4587 at 5448.772 kb on + strand, within Psyr_4587 at 5448.884 kb on + strand at 5448.884 kb on + strand at 5448.884 kb on + strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.902 kb on + strand at 5448.902 kb on + strand at 5448.903 kb on - strand at 5448.903 kb on - strand at 5449.005 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.367 kb on + strand, within Psyr_4589 at 5449.368 kb on - strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.632 kb on - strand, within Psyr_4589 at 5449.836 kb on + strand at 5449.836 kb on + strand at 5449.837 kb on - strand at 5449.837 kb on - strand at 5449.837 kb on - strand at 5449.837 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 0.5 mM remove 5,446,865 + Psyr_4585 0.80 +0.3 5,446,865 + Psyr_4585 0.80 +0.0 5,446,865 + Psyr_4585 0.80 +0.5 5,446,865 + Psyr_4585 0.80 +0.5 5,446,865 + Psyr_4585 0.80 +0.9 5,446,866 - Psyr_4585 0.80 -0.1 5,446,866 - Psyr_4585 0.80 -0.6 5,446,866 - Psyr_4585 0.80 +1.3 5,446,866 - Psyr_4585 0.80 -2.1 5,446,889 + Psyr_4585 0.82 -0.1 5,446,907 + Psyr_4585 0.83 +1.0 5,446,907 + Psyr_4585 0.83 -0.9 5,446,907 + Psyr_4585 0.83 -0.1 5,446,907 + Psyr_4585 0.83 -1.4 5,446,908 - Psyr_4585 0.83 -0.4 5,446,908 - Psyr_4585 0.83 -0.9 5,446,908 - Psyr_4585 0.83 +0.1 5,446,908 - Psyr_4585 0.83 +0.2 5,446,908 - Psyr_4585 0.83 -0.8 5,446,908 - Psyr_4585 0.83 -2.3 5,446,908 - Psyr_4585 0.83 -1.3 5,446,908 - Psyr_4585 0.83 -0.2 5,446,911 + Psyr_4585 0.84 +0.1 5,446,911 + Psyr_4585 0.84 +0.5 5,446,917 + Psyr_4585 0.84 -0.2 5,446,917 + Psyr_4585 0.84 +0.2 5,446,918 - Psyr_4585 0.84 -2.5 5,447,035 + +0.4 5,447,036 - +0.9 5,447,058 + -1.1 5,447,058 + -0.4 5,447,058 + -0.4 5,447,058 + -0.4 5,447,058 + -1.1 5,447,059 - -1.4 5,447,059 - -2.0 5,447,059 - +0.5 5,447,059 - +0.3 5,447,059 - -0.1 5,447,157 - -1.0 5,447,175 - +0.3 5,447,175 - -0.2 5,447,211 + +0.6 5,447,211 + -1.2 5,447,211 + -0.5 5,447,211 + -1.1 5,447,212 - +0.5 5,447,236 - -0.8 5,447,552 + Psyr_4586 0.46 -1.0 5,447,552 + Psyr_4586 0.46 -1.7 5,447,552 + Psyr_4586 0.46 -0.4 5,447,552 + Psyr_4586 0.46 -0.1 5,447,552 + Psyr_4586 0.46 -1.3 5,447,553 - Psyr_4586 0.46 -0.6 5,447,846 + -0.8 5,447,847 - +0.7 5,447,863 + +0.0 5,447,864 - -0.3 5,447,864 - +1.1 5,448,098 - Psyr_4587 0.23 +0.3 5,448,130 + Psyr_4587 0.26 +0.7 5,448,130 + Psyr_4587 0.26 +0.9 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 +0.6 5,448,130 + Psyr_4587 0.26 +0.9 5,448,130 + Psyr_4587 0.26 +1.0 5,448,130 + Psyr_4587 0.26 +1.0 5,448,130 + Psyr_4587 0.26 +0.1 5,448,130 + Psyr_4587 0.26 -0.6 5,448,130 + Psyr_4587 0.26 +0.5 5,448,130 + Psyr_4587 0.26 +0.4 5,448,130 + Psyr_4587 0.26 -0.4 5,448,130 + Psyr_4587 0.26 -0.3 5,448,130 + Psyr_4587 0.26 -0.9 5,448,130 + Psyr_4587 0.26 -1.0 5,448,130 + Psyr_4587 0.26 -1.2 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 +0.3 5,448,130 + Psyr_4587 0.26 +2.4 5,448,130 + Psyr_4587 0.26 +1.0 5,448,130 + Psyr_4587 0.26 -0.4 5,448,130 + Psyr_4587 0.26 +0.7 5,448,130 + Psyr_4587 0.26 +0.5 5,448,130 + Psyr_4587 0.26 +0.8 5,448,130 + Psyr_4587 0.26 -0.7 5,448,131 - Psyr_4587 0.26 -1.6 5,448,131 - Psyr_4587 0.26 -0.5 5,448,131 - Psyr_4587 0.26 +0.4 5,448,131 - Psyr_4587 0.26 -0.3 5,448,131 - Psyr_4587 0.26 -0.3 5,448,131 - Psyr_4587 0.26 +1.3 5,448,131 - Psyr_4587 0.26 +0.9 5,448,131 - Psyr_4587 0.26 +0.5 5,448,131 - Psyr_4587 0.26 -0.4 5,448,131 - Psyr_4587 0.26 -0.4 5,448,131 - Psyr_4587 0.26 -0.7 5,448,131 - Psyr_4587 0.26 -0.4 5,448,131 - Psyr_4587 0.26 -0.7 5,448,131 - Psyr_4587 0.26 -0.8 5,448,131 - Psyr_4587 0.26 -0.4 5,448,131 - Psyr_4587 0.26 -0.3 5,448,131 - Psyr_4587 0.26 -0.7 5,448,131 - Psyr_4587 0.26 -0.6 5,448,166 + Psyr_4587 0.29 -0.3 5,448,166 + Psyr_4587 0.29 +0.3 5,448,167 - Psyr_4587 0.29 +0.2 5,448,167 - Psyr_4587 0.29 +0.1 5,448,167 - Psyr_4587 0.29 +0.6 5,448,167 - Psyr_4587 0.29 +0.0 5,448,295 - Psyr_4587 0.42 -0.6 5,448,316 + Psyr_4587 0.44 -0.3 5,448,316 + Psyr_4587 0.44 -0.6 5,448,316 + Psyr_4587 0.44 -0.8 5,448,316 + Psyr_4587 0.44 -0.8 5,448,316 + Psyr_4587 0.44 +0.5 5,448,316 + Psyr_4587 0.44 -0.5 5,448,316 + Psyr_4587 0.44 +1.0 5,448,316 + Psyr_4587 0.44 -1.3 5,448,317 - Psyr_4587 0.44 +1.0 5,448,317 - Psyr_4587 0.44 +0.3 5,448,317 - Psyr_4587 0.44 -2.9 5,448,317 - Psyr_4587 0.44 +1.4 5,448,574 + Psyr_4587 0.68 -0.2 5,448,772 + Psyr_4587 0.87 +0.0 5,448,884 + -0.6 5,448,884 + -0.1 5,448,884 + +0.8 5,448,885 - +0.2 5,448,885 - +0.4 5,448,885 - -0.0 5,448,885 - +1.6 5,448,885 - +0.2 5,448,885 - -0.6 5,448,885 - -0.3 5,448,885 - +0.5 5,448,885 - +0.7 5,448,885 - -1.1 5,448,885 - -1.2 5,448,885 - +1.3 5,448,885 - +0.8 5,448,885 - +0.7 5,448,885 - -1.1 5,448,902 + -1.3 5,448,902 + +0.6 5,448,903 - -1.1 5,448,903 - +0.9 5,449,005 + Psyr_4588 0.28 +0.9 5,449,067 + Psyr_4588 0.44 -0.8 5,449,067 + Psyr_4588 0.44 +0.6 5,449,067 + Psyr_4588 0.44 +0.6 5,449,067 + Psyr_4588 0.44 +0.0 5,449,067 + Psyr_4588 0.44 +0.6 5,449,068 - Psyr_4588 0.44 +0.5 5,449,068 - Psyr_4588 0.44 -0.1 5,449,068 - Psyr_4588 0.44 -0.1 5,449,367 + Psyr_4589 0.16 -0.2 5,449,368 - Psyr_4589 0.16 -0.9 5,449,528 + Psyr_4589 0.47 +0.5 5,449,528 + Psyr_4589 0.47 +0.9 5,449,528 + Psyr_4589 0.47 -1.9 5,449,528 + Psyr_4589 0.47 +0.4 5,449,529 - Psyr_4589 0.47 -1.5 5,449,529 - Psyr_4589 0.47 -0.7 5,449,529 - Psyr_4589 0.47 -0.7 5,449,529 - Psyr_4589 0.47 -1.0 5,449,529 - Psyr_4589 0.47 +0.5 5,449,529 - Psyr_4589 0.47 -2.8 5,449,632 - Psyr_4589 0.67 +0.0 5,449,836 + -0.5 5,449,836 + -0.4 5,449,837 - +0.1 5,449,837 - +0.6 5,449,837 - +2.1 5,449,837 - +1.0
Or see this region's nucleotide sequence