Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3794

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
4,509,561	+				+0.1
4,509,561	+				+0.2
4,509,561	+				-0.0
4,509,561	+				-1.3
4,509,561	+				-0.8
4,509,561	+				-0.2
4,509,561	+				+0.4
4,509,561	+				-0.1
4,509,561	+				+0.5
4,509,561	+				+0.3
4,509,561	+				-0.1
4,509,561	+				+0.0
4,509,561	+				-0.2
4,509,561	+				+1.7
4,509,561	+				-0.3
4,509,561	+				+0.0
4,509,561	+				-1.3
4,509,561	+				+0.9
4,509,561	+				+0.6
4,509,561	+				-0.7
4,509,561	+				+0.2
4,509,561	+				-0.2
4,509,562	-				-0.9
4,509,562	-				-1.1
4,509,562	-				+0.5
4,509,562	-				-0.3
4,509,562	-				+0.1
4,509,562	-				-0.0
4,509,562	-				+0.2
4,509,562	-				+0.4
4,509,562	-				-0.1
4,509,562	-				+0.2
4,509,562	-				+0.5
4,509,562	-				+0.1
4,509,562	-				+1.0
4,509,562	-				-0.2
4,509,562	-				-1.4
4,509,563	+				-0.7
4,509,564	-				-0.9
4,509,941	+		Psyr_3793	0.58	-3.3
4,509,941	+		Psyr_3793	0.58	-0.1
4,509,942	-		Psyr_3793	0.58	-1.7
4,509,942	-		Psyr_3793	0.58	-1.0
4,509,972	+		Psyr_3793	0.62	+0.1
4,509,972	+		Psyr_3793	0.62	+0.3
4,509,972	+		Psyr_3793	0.62	+0.1
4,509,981	+		Psyr_3793	0.63	-1.1
4,510,306	+				-0.7
4,510,310	+				-0.2
4,510,316	+				+0.6
4,510,316	+				-0.6
4,510,316	+				-0.1
4,510,316	+				+0.5
4,510,472	+				-0.8
4,510,473	-				+0.3
4,510,575	-				-0.8
4,510,575	-				-0.3
4,510,575	-				-0.7
4,510,712	+		Psyr_3794	0.11	-0.7
4,510,712	+		Psyr_3794	0.11	-2.2
4,510,712	+		Psyr_3794	0.11	+0.4
4,510,713	-		Psyr_3794	0.11	-0.9
4,510,713	-		Psyr_3794	0.11	+2.4
4,510,713	-		Psyr_3794	0.11	+0.5
4,510,820	+		Psyr_3794	0.16	-0.8
4,510,870	+		Psyr_3794	0.18	+1.6
4,510,870	+		Psyr_3794	0.18	+0.1
4,510,870	+		Psyr_3794	0.18	+0.4
4,510,870	+		Psyr_3794	0.18	+1.1
4,510,871	-		Psyr_3794	0.18	-0.7
4,510,871	-		Psyr_3794	0.18	+1.1
4,510,871	-		Psyr_3794	0.18	+0.8
4,510,871	-		Psyr_3794	0.18	+1.1
4,510,871	-		Psyr_3794	0.18	-0.2
4,510,871	-		Psyr_3794	0.18	+0.7
4,510,871	-		Psyr_3794	0.18	-0.4
4,510,930	-		Psyr_3794	0.20	+0.0
4,510,930	-		Psyr_3794	0.20	-1.5
4,511,055	+		Psyr_3794	0.25	+0.4
4,511,055	+		Psyr_3794	0.25	-0.9
4,511,056	-		Psyr_3794	0.26	-0.5
4,511,089	+		Psyr_3794	0.27	+0.9
4,511,089	+		Psyr_3794	0.27	+0.1
4,511,089	+		Psyr_3794	0.27	+0.3
4,511,089	+		Psyr_3794	0.27	+0.9
4,511,089	+		Psyr_3794	0.27	+0.3
4,511,089	+		Psyr_3794	0.27	-1.6
4,511,090	-		Psyr_3794	0.27	-0.7
4,511,137	+		Psyr_3794	0.29	+1.1
4,511,138	-		Psyr_3794	0.29	-0.5
4,511,152	+		Psyr_3794	0.30	+0.2
4,511,227	-		Psyr_3794	0.33	-1.7
4,511,227	-		Psyr_3794	0.33	+0.3
4,511,227	-		Psyr_3794	0.33	-0.7
4,511,246	-		Psyr_3794	0.34	+0.6
4,511,246	-		Psyr_3794	0.34	+0.8
4,511,246	-		Psyr_3794	0.34	+0.5
4,511,248	-		Psyr_3794	0.34	+1.3
4,511,399	-		Psyr_3794	0.40	-1.1
4,511,457	+		Psyr_3794	0.42	-0.0
4,511,458	-		Psyr_3794	0.42	-0.3
4,511,491	+		Psyr_3794	0.44	-0.2
4,511,587	+		Psyr_3794	0.48	-0.8
4,511,587	+		Psyr_3794	0.48	+0.1
4,511,587	+		Psyr_3794	0.48	+0.6
4,511,587	+		Psyr_3794	0.48	+0.9
4,511,587	+		Psyr_3794	0.48	-2.0
4,511,588	-		Psyr_3794	0.48	+0.1
4,511,588	-		Psyr_3794	0.48	-1.2
4,511,588	-		Psyr_3794	0.48	+0.3
4,511,695	+		Psyr_3794	0.52	-0.5
4,511,695	+		Psyr_3794	0.52	-1.1
4,511,696	-		Psyr_3794	0.53	-0.3
4,511,696	-		Psyr_3794	0.53	-0.0
4,511,766	-		Psyr_3794	0.55	+0.2
4,511,854	+		Psyr_3794	0.59	+0.5
4,511,854	+		Psyr_3794	0.59	+1.2
4,511,854	+		Psyr_3794	0.59	+0.6
4,511,854	+		Psyr_3794	0.59	+0.7
4,511,855	-		Psyr_3794	0.59	+1.3
4,511,878	+		Psyr_3794	0.60	+0.1
4,511,879	-		Psyr_3794	0.60	-0.6
4,511,908	+		Psyr_3794	0.61	-0.2
4,511,908	+		Psyr_3794	0.61	-1.0
4,511,909	-		Psyr_3794	0.61	+1.2
4,511,909	-		Psyr_3794	0.61	+0.2
4,511,920	+		Psyr_3794	0.62	+0.6
4,511,920	+		Psyr_3794	0.62	-0.1
4,511,921	-		Psyr_3794	0.62	-0.2
4,511,935	+		Psyr_3794	0.63	-0.3
4,511,936	-		Psyr_3794	0.63	-1.1
4,511,944	+		Psyr_3794	0.63	-0.2
4,511,944	+		Psyr_3794	0.63	-0.3
4,511,944	+		Psyr_3794	0.63	+0.3
4,511,945	-		Psyr_3794	0.63	-0.8
4,511,945	-		Psyr_3794	0.63	+0.8
4,511,947	+		Psyr_3794	0.63	-0.2
4,511,948	-		Psyr_3794	0.63	+0.2
4,511,948	-		Psyr_3794	0.63	+0.3
4,511,971	+		Psyr_3794	0.64	+0.4
4,511,971	+		Psyr_3794	0.64	+0.4
4,511,972	-		Psyr_3794	0.64	-0.2
4,511,974	+		Psyr_3794	0.64	-0.0
4,511,975	-		Psyr_3794	0.64	+0.1
4,511,975	-		Psyr_3794	0.64	+0.4
4,511,975	-		Psyr_3794	0.64	-0.0
4,512,043	+		Psyr_3794	0.67	+0.5
4,512,085	+		Psyr_3794	0.69	-1.5
4,512,085	+		Psyr_3794	0.69	+0.9
4,512,085	+		Psyr_3794	0.69	+0.6
4,512,085	+		Psyr_3794	0.69	-0.6
4,512,103	+		Psyr_3794	0.70	-0.3
4,512,103	+		Psyr_3794	0.70	+0.7
4,512,103	+		Psyr_3794	0.70	-0.6
4,512,104	-		Psyr_3794	0.70	-0.2
4,512,104	-		Psyr_3794	0.70	-1.5
4,512,271	+		Psyr_3794	0.77	+1.0
4,512,271	+		Psyr_3794	0.77	+0.9
4,512,271	+		Psyr_3794	0.77	-0.5
4,512,271	+		Psyr_3794	0.77	+0.1
4,512,272	-		Psyr_3794	0.77	-0.1
4,512,272	-		Psyr_3794	0.77	+0.2
4,512,274	-		Psyr_3794	0.77	+0.3
4,512,324	+		Psyr_3794	0.79	+1.1
4,512,325	-		Psyr_3794	0.79	+0.6
4,512,325	-		Psyr_3794	0.79	-0.9
4,512,338	-		Psyr_3794	0.80	-1.5
4,512,377	-		Psyr_3794	0.81	-0.9
4,512,385	+		Psyr_3794	0.82	+1.8
4,512,385	+		Psyr_3794	0.82	-0.2
4,512,386	-		Psyr_3794	0.82	+0.1
4,512,386	-		Psyr_3794	0.82	+0.2
4,512,466	+		Psyr_3794	0.85	+0.9
4,512,467	-		Psyr_3794	0.85	+0.1
4,512,467	-		Psyr_3794	0.85	-0.1
4,512,467	-		Psyr_3794	0.85	+0.5
4,512,487	+		Psyr_3794	0.86	-0.1
4,512,487	+		Psyr_3794	0.86	-0.7
4,512,487	+		Psyr_3794	0.86	+1.4
4,512,487	+		Psyr_3794	0.86	-0.3
4,512,487	+		Psyr_3794	0.86	-1.5
4,512,487	+		Psyr_3794	0.86	+0.1
4,512,488	-		Psyr_3794	0.86	+0.5
4,512,488	-		Psyr_3794	0.86	-0.2
4,512,488	-		Psyr_3794	0.86	+0.2
4,512,488	-		Psyr_3794	0.86	+0.2
4,512,488	-		Psyr_3794	0.86	+0.4
4,512,488	-		Psyr_3794	0.86	+0.6
4,512,488	-		Psyr_3794	0.86	-0.2
4,512,488	-		Psyr_3794	0.86	+1.0
4,512,488	-		Psyr_3794	0.86	+0.1
4,512,488	-		Psyr_3794	0.86	+0.5
4,512,488	-		Psyr_3794	0.86	-0.9
4,512,488	-		Psyr_3794	0.86	-0.1
4,512,550	+		Psyr_3794	0.88	-0.7
4,512,550	+		Psyr_3794	0.88	-1.0
4,512,550	+		Psyr_3794	0.88	-0.0
4,512,550	+		Psyr_3794	0.88	-0.0
4,512,550	+		Psyr_3794	0.88	+0.3
4,512,550	+		Psyr_3794	0.88	-1.2
4,512,551	-		Psyr_3794	0.89	-1.0
4,512,551	-		Psyr_3794	0.89	+0.5
4,512,551	-		Psyr_3794	0.89	+0.5
4,512,551	-		Psyr_3794	0.89	-0.1
4,512,551	-		Psyr_3794	0.89	+1.0
4,512,551	-		Psyr_3794	0.89	-1.8
4,512,551	-		Psyr_3794	0.89	+1.4
4,512,551	-		Psyr_3794	0.89	-0.9
4,512,626	-				-0.6
4,512,834	+				+0.4
4,512,834	+				-0.6
4,512,866	+				-0.2
4,512,866	+				-0.7
4,512,866	+				+0.2
4,512,867	-				+0.2
4,512,867	-				-1.6
4,512,867	-				+0.6
4,512,887	+				+0.2
4,512,887	+				-1.5
4,512,887	+				-1.5
4,512,887	+				+0.9
4,512,887	+				+0.1
4,512,888	-				+0.4
4,512,888	-				+0.6
4,512,888	-				+0.2
4,512,888	-				+1.5
4,512,888	-				+0.1
4,512,888	-				-1.0
4,512,917	-				-0.2
4,512,938	+				+1.3
4,512,938	+				+0.4
4,512,938	+				-0.3
4,512,938	+				-0.2
4,512,938	+				+0.9
4,512,938	+				-0.6
4,512,939	-				-0.7
4,512,939	-				-0.5
4,512,939	-				-1.4
4,512,939	-				-0.7
4,512,939	-				-0.3
4,512,939	-				-0.5
4,512,939	-				-0.5
4,513,185	+		Psyr_3795	0.59	+0.3
4,513,186	-		Psyr_3795	0.59	+0.1
4,513,186	-		Psyr_3795	0.59	-0.5
4,513,320	+				+0.6
4,513,321	-				+1.2
4,513,756	+		Psyr_3796	0.42	-1.0
4,513,756	+		Psyr_3796	0.42	-0.0
4,513,756	+		Psyr_3796	0.42	+0.6