Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3731

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
4,437,269	+		Psyr_3728	0.45	+0.1
4,437,269	+		Psyr_3728	0.45	-1.2
4,437,270	-		Psyr_3728	0.46	+0.7
4,437,273	+		Psyr_3728	0.46	-0.1
4,437,273	+		Psyr_3728	0.46	-0.5
4,437,274	-		Psyr_3728	0.47	-0.8
4,437,274	-		Psyr_3728	0.47	+1.9
4,437,276	+		Psyr_3728	0.47	-0.6
4,437,276	+		Psyr_3728	0.47	-0.4
4,437,277	-		Psyr_3728	0.47	+0.3
4,437,277	-		Psyr_3728	0.47	-1.2
4,437,280	+		Psyr_3728	0.48	+1.9
4,437,280	+		Psyr_3728	0.48	+0.5
4,437,281	-		Psyr_3728	0.49	+0.3
4,437,365	+		Psyr_3728	0.71	-0.2
4,437,365	+		Psyr_3728	0.71	-0.6
4,437,503	+				-1.4
4,437,540	+				-1.5
4,437,540	+				-0.3
4,437,541	-				-0.3
4,437,554	+				+0.2
4,437,663	-		Psyr_3729	0.31	+0.1
4,437,705	+		Psyr_3729	0.43	+0.7
4,437,705	+		Psyr_3729	0.43	-0.2
4,437,705	+		Psyr_3729	0.43	+1.1
4,437,705	+		Psyr_3729	0.43	+0.2
4,437,706	-		Psyr_3729	0.43	+1.8
4,437,706	-		Psyr_3729	0.43	-0.3
4,437,706	-		Psyr_3729	0.43	-0.2
4,437,709	+		Psyr_3729	0.44	-0.6
4,437,710	-		Psyr_3729	0.44	-1.7
4,437,710	-		Psyr_3729	0.44	-0.0
4,437,783	-		Psyr_3729	0.64	-0.2
4,437,834	-		Psyr_3729	0.79	-0.2
4,437,841	+		Psyr_3729	0.81	-0.7
4,437,842	-		Psyr_3729	0.81	-0.7
4,437,861	+		Psyr_3729	0.86	+0.8
4,437,884	+				-0.3
4,438,219	-				-0.4
4,438,260	+				+0.2
4,438,261	-				+0.2
4,438,447	+		Psyr_3731	0.16	+0.5
4,438,448	-		Psyr_3731	0.16	-0.7
4,438,448	-		Psyr_3731	0.16	+0.9
4,438,476	+		Psyr_3731	0.18	+0.5
4,438,556	-		Psyr_3731	0.24	+4.1
4,438,594	-		Psyr_3731	0.27	-0.4
4,438,618	+		Psyr_3731	0.29	+1.2
4,438,618	+		Psyr_3731	0.29	-0.6
4,438,618	+		Psyr_3731	0.29	+0.3
4,438,618	+		Psyr_3731	0.29	+0.7
4,438,618	+		Psyr_3731	0.29	-1.3
4,438,619	-		Psyr_3731	0.29	-0.3
4,438,619	-		Psyr_3731	0.29	+0.1
4,438,619	-		Psyr_3731	0.29	-2.6
4,438,619	-		Psyr_3731	0.29	+0.4
4,438,619	-		Psyr_3731	0.29	+0.9
4,438,619	-		Psyr_3731	0.29	+0.5
4,438,654	+		Psyr_3731	0.31	+0.4
4,438,691	-		Psyr_3731	0.34	+0.3
4,438,691	-		Psyr_3731	0.34	+0.1
4,438,691	-		Psyr_3731	0.34	-0.3
4,438,691	-		Psyr_3731	0.34	-0.6
4,438,705	+		Psyr_3731	0.35	+0.8
4,438,705	+		Psyr_3731	0.35	+0.1
4,438,705	+		Psyr_3731	0.35	+0.6
4,438,706	-		Psyr_3731	0.35	+0.4
4,438,952	+		Psyr_3731	0.53	-1.4
4,438,952	+		Psyr_3731	0.53	+1.0
4,438,952	+		Psyr_3731	0.53	-0.4
4,438,952	+		Psyr_3731	0.53	+1.0
4,438,952	+		Psyr_3731	0.53	-0.0
4,438,952	+		Psyr_3731	0.53	-0.6
4,438,952	+		Psyr_3731	0.53	-0.6
4,438,952	+		Psyr_3731	0.53	-0.7
4,438,953	-		Psyr_3731	0.53	-0.2
4,438,953	-		Psyr_3731	0.53	-0.1
4,438,953	-		Psyr_3731	0.53	+0.9
4,438,953	-		Psyr_3731	0.53	+0.1
4,438,953	-		Psyr_3731	0.53	+0.1
4,438,953	-		Psyr_3731	0.53	+0.3
4,438,953	-		Psyr_3731	0.53	-0.3
4,438,953	-		Psyr_3731	0.53	+0.6
4,439,108	+		Psyr_3731	0.65	-0.3
4,439,109	-		Psyr_3731	0.65	-0.3
4,439,109	-		Psyr_3731	0.65	-1.1
4,439,109	-		Psyr_3731	0.65	-0.0
4,439,109	-		Psyr_3731	0.65	+0.3
4,439,109	-		Psyr_3731	0.65	+0.5
4,439,109	-		Psyr_3731	0.65	+0.9
4,439,109	-		Psyr_3731	0.65	-0.1
4,439,111	+		Psyr_3731	0.65	-0.1
4,439,111	+		Psyr_3731	0.65	+0.1
4,439,111	+		Psyr_3731	0.65	+1.7
4,439,111	+		Psyr_3731	0.65	+0.8
4,439,326	+		Psyr_3731	0.81	+0.4
4,439,326	+		Psyr_3731	0.81	+1.4
4,439,326	+		Psyr_3731	0.81	+0.5
4,439,327	-		Psyr_3731	0.81	+0.1
4,439,327	-		Psyr_3731	0.81	+0.4
4,439,327	-		Psyr_3731	0.81	+0.5
4,439,352	+		Psyr_3731	0.83	+0.0
4,439,352	+		Psyr_3731	0.83	+0.2
4,439,352	+		Psyr_3731	0.83	+0.4
4,439,352	+		Psyr_3731	0.83	+0.5
4,439,352	+		Psyr_3731	0.83	+0.3
4,439,353	-		Psyr_3731	0.83	+0.0
4,439,353	-		Psyr_3731	0.83	-0.8
4,439,387	-		Psyr_3731	0.86	+0.6
4,439,539	+				+0.4
4,439,540	-				+0.6
4,439,603	+				+0.7
4,439,625	-				+0.4
4,439,797	+				-0.5
4,439,797	+				-0.4
4,439,797	+				+0.1
4,439,797	+				+0.3
4,439,797	+				-0.4
4,439,797	+				+0.3
4,439,797	+				-0.3
4,439,797	+				+0.2
4,439,797	+				+0.8
4,439,797	+				+1.1
4,439,797	+				+0.6
4,439,798	-				+0.6
4,439,798	-				-0.5
4,439,798	-				+0.2
4,439,798	-				-0.9
4,439,798	-				+0.7
4,439,798	-				-0.4
4,439,798	-				-0.6
4,439,798	-				+0.8
4,439,798	-				+0.4
4,439,798	-				-0.3
4,439,798	-				+0.4
4,439,798	-				+0.5
4,439,798	-				+0.1
4,439,798	-				-1.3
4,439,798	-				+0.6
4,439,799	+				-0.1
4,439,799	+				-1.0
4,439,800	-				+0.4
4,439,801	+				+0.0
4,439,801	+				+0.1
4,439,801	+				-0.9
4,439,801	+				-2.0
4,439,801	+				+0.2
4,439,801	+				+1.3
4,439,802	-				+0.3
4,439,802	-				-0.2
4,439,802	-				+0.0
4,439,802	-				-0.2
4,439,802	-				-1.2
4,439,802	-				+1.0
4,439,837	-				-0.6
4,439,837	-				+0.9
4,439,861	+				-0.1
4,440,169	+				-0.4
4,440,169	+				-2.5
4,440,170	-				+0.9
4,440,170	-				-0.2
4,440,170	-				-0.1
4,440,178	-				-0.6
4,440,178	-				+0.8
4,440,192	+				-1.4
4,440,192	+				+0.0
4,440,284	+				+0.8
4,440,285	-				-0.3
4,440,285	-				-0.1
4,440,373	+				+1.1
4,440,373	+				-1.0
4,440,373	+				+0.6
4,440,373	+				+0.5
4,440,374	-				+0.8
4,440,374	-				+0.1
4,440,374	-				-0.1
4,440,374	-				+0.3
4,440,374	-				+0.4
4,440,374	-				+0.0
4,440,374	-				-0.8
4,440,374	-				-0.3
4,440,374	-				-0.2