Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0906

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
1,026,027	-		Psyr_0905	0.71	-0.5
1,026,042	-		Psyr_0905	0.71	+0.4
1,026,042	-		Psyr_0905	0.71	-1.0
1,026,326	+		Psyr_0905	0.86	+0.8
1,026,368	-		Psyr_0905	0.88	-0.3
1,026,395	+		Psyr_0905	0.90	-0.2
1,026,395	+		Psyr_0905	0.90	-0.5
1,026,395	+		Psyr_0905	0.90	+1.3
1,026,395	+		Psyr_0905	0.90	-0.3
1,026,395	+		Psyr_0905	0.90	-0.1
1,026,395	+		Psyr_0905	0.90	+0.2
1,026,395	+		Psyr_0905	0.90	-2.7
1,026,395	+		Psyr_0905	0.90	+2.0
1,026,395	+		Psyr_0905	0.90	+0.5
1,026,395	+		Psyr_0905	0.90	-0.6
1,026,395	+		Psyr_0905	0.90	-1.1
1,026,395	+				-0.3
1,026,396	-		Psyr_0905	0.90	-0.5
1,026,396	-		Psyr_0905	0.90	-0.5
1,026,396	-		Psyr_0905	0.90	+0.7
1,026,396	-		Psyr_0905	0.90	-0.6
1,026,396	-		Psyr_0905	0.90	-0.6
1,026,396	-		Psyr_0905	0.90	+0.4
1,026,396	-		Psyr_0905	0.90	-0.6
1,026,396	-		Psyr_0905	0.90	-0.3
1,026,396	-		Psyr_0905	0.90	-1.3
1,026,396	-		Psyr_0905	0.90	+0.5
1,026,396	-		Psyr_0905	0.90	+0.7
1,026,396	-		Psyr_0905	0.90	+0.2
1,026,396	-		Psyr_0905	0.90	-0.5
1,026,396	-		Psyr_0905	0.90	-1.0
1,026,396	-		Psyr_0905	0.90	+0.5
1,026,444	+				-0.5
1,026,444	+				-0.3
1,026,444	+				+1.0
1,026,444	+				+0.4
1,026,444	+				-0.9
1,026,444	+				-0.7
1,026,444	+				-2.7
1,026,444	+				+1.0
1,026,445	-				+0.0
1,026,445	-				+0.3
1,026,445	-				-0.7
1,026,445	-				-0.1
1,026,463	-				-0.2
1,026,463	-				-0.6
1,026,530	-				+0.4
1,026,530	-				-1.1
1,026,559	-				-0.4
1,026,585	+				+0.3
1,026,586	-				+0.6
1,026,626	-				+0.4
1,026,626	-				-0.7
1,026,626	-				-0.1
1,026,639	-				+2.0
1,026,645	+				-1.5
1,026,645	+				-0.7
1,026,645	+				-0.8
1,026,645	+				-2.8
1,026,646	-				-0.4
1,026,646	-				-0.7
1,026,667	+				+0.0
1,026,667	+				+1.0
1,026,667	+				+1.6
1,026,667	+				+0.1
1,026,667	+				+2.4
1,026,667	+				+0.3
1,026,667	+				-0.2
1,026,667	+				-0.8
1,026,668	-				-1.1
1,026,668	-				-0.3
1,026,668	-				-0.0
1,026,668	-				+0.5
1,026,668	-				+0.0
1,026,669	+				-0.3
1,026,669	+				-0.3
1,026,669	+				+1.1
1,026,669	+				+0.0
1,026,669	+				-1.0
1,026,669	+				+0.5
1,026,670	-				+0.2
1,026,670	-				+0.3
1,026,670	-				+0.1
1,026,776	+				+0.0
1,026,777	-				+0.2
1,026,778	+				-0.8
1,026,779	-				-0.2
1,026,779	-				-1.0
1,026,779	-				+0.7
1,026,779	-				-1.4
1,026,779	-				+0.5
1,026,779	-				+0.3
1,026,779	-				+0.7
1,026,804	-				-0.1
1,026,976	+				-0.4
1,026,976	+				+1.6
1,026,989	+				-0.6
1,026,990	-				-0.1
1,026,990	-				+0.2
1,027,015	+				-0.5
1,027,016	-				-0.9
1,027,047	+				-1.4
1,027,048	-				-0.1
1,027,048	-				-0.3
1,027,056	+				-0.0
1,027,067	+				+0.2
1,027,067	+				+0.7
1,027,067	+				-0.6
1,027,067	+				+0.7
1,027,068	-				+1.2
1,027,068	-				-1.7
1,027,068	-				-0.3
1,027,068	-				-0.4
1,027,186	+		Psyr_0906	0.12	+1.0
1,027,263	+		Psyr_0906	0.16	+0.6
1,027,263	+		Psyr_0906	0.16	-0.7
1,027,263	+		Psyr_0906	0.16	+0.1
1,027,263	+		Psyr_0906	0.16	+0.2
1,027,263	+		Psyr_0906	0.16	+0.6
1,027,263	+		Psyr_0906	0.16	+0.2
1,027,263	+		Psyr_0906	0.16	-1.7
1,027,263	+		Psyr_0906	0.16	+0.3
1,027,263	+		Psyr_0906	0.16	-0.3
1,027,263	+		Psyr_0906	0.16	+1.0
1,027,263	+		Psyr_0906	0.16	+0.6
1,027,263	+		Psyr_0906	0.16	+0.4
1,027,264	-		Psyr_0906	0.16	+1.2
1,027,264	-		Psyr_0906	0.16	+0.1
1,027,264	-		Psyr_0906	0.16	-0.5
1,027,264	-		Psyr_0906	0.16	+1.9
1,027,264	-		Psyr_0906	0.16	-0.6
1,027,264	-		Psyr_0906	0.16	+0.3
1,027,264	-		Psyr_0906	0.16	-0.1
1,027,264	-		Psyr_0906	0.16	-0.2
1,027,347	+		Psyr_0906	0.20	+0.2
1,027,347	+		Psyr_0906	0.20	-0.5
1,027,347	+		Psyr_0906	0.20	-0.1
1,027,347	+		Psyr_0906	0.20	+0.0
1,027,348	-		Psyr_0906	0.20	+1.4
1,027,392	+		Psyr_0906	0.22	+0.6
1,027,393	-		Psyr_0906	0.23	+0.7
1,027,618	-		Psyr_0906	0.35	-0.1
1,027,694	+		Psyr_0906	0.39	-0.7
1,027,694	+		Psyr_0906	0.39	+0.6
1,027,695	-		Psyr_0906	0.39	-0.7
1,027,728	+		Psyr_0906	0.40	-1.1
1,027,728	+		Psyr_0906	0.40	+0.7
1,027,729	-		Psyr_0906	0.40	-0.0
1,027,729	-		Psyr_0906	0.40	-1.0
1,027,729	-		Psyr_0906	0.40	+0.7
1,027,761	+		Psyr_0906	0.42	+0.8
1,027,761	+		Psyr_0906	0.42	+1.0
1,027,762	-		Psyr_0906	0.42	+0.3
1,027,889	+		Psyr_0906	0.49	-0.0
1,027,889	+		Psyr_0906	0.49	-0.6
1,027,889	+		Psyr_0906	0.49	-0.6
1,027,890	-		Psyr_0906	0.49	-0.6
1,028,014	+		Psyr_0906	0.56	-0.3
1,028,015	-		Psyr_0906	0.56	+0.9
1,028,015	-		Psyr_0906	0.56	-0.5
1,028,015	-		Psyr_0906	0.56	+0.4
1,028,015	-		Psyr_0906	0.56	+0.6
1,028,135	+		Psyr_0906	0.62	-0.1
1,028,136	-		Psyr_0906	0.62	+0.0
1,028,255	-		Psyr_0906	0.68	-0.5
1,028,255	-		Psyr_0906	0.68	+0.6
1,028,255	-		Psyr_0906	0.68	+0.4
1,028,255	-		Psyr_0906	0.68	+0.4
1,028,255	-		Psyr_0906	0.68	-0.6
1,028,255	-		Psyr_0906	0.68	+0.2
1,028,255	-		Psyr_0906	0.68	+0.7
1,028,548	+		Psyr_0906	0.84	+0.6
1,028,704	+				+0.2
1,028,704	+				+0.3
1,028,745	-				-0.9
1,028,768	+				-0.3
1,028,853	+				-0.7
1,028,853	+				+0.1
1,028,853	+				-1.0
1,028,853	+				-0.6
1,028,853	+				+0.7
1,028,853	+				-3.1
1,028,854	-				+0.6
1,028,854	-				+1.5
1,028,881	+				-0.1
1,028,881	+				-0.6
1,028,881	+				+0.4
1,028,881	+				-0.3
1,028,881	+				-0.3
1,028,881	+				-0.1
1,028,881	+				-0.2
1,028,881	+				+1.0
1,028,881	+				-2.0
1,028,881	+				+0.9
1,028,881	+				+0.4
1,028,882	-				+0.1
1,028,882	-				-0.7
1,028,882	-				-1.0
1,028,882	-				+0.6
1,028,882	-				-0.8
1,028,882	-				+0.2
1,028,882	-				-0.0
1,028,883	+				+1.6
1,028,883	+				+0.2
1,028,883	+				-0.2
1,028,883	+				+0.2
1,028,883	+				+1.0
1,028,883	+				+0.6
1,028,883	+				+1.0
1,028,883	+				+0.0
1,028,883	+				-0.0
1,028,883	+				+0.6
1,028,883	+				-0.5
1,028,883	+				+1.0
1,028,883	+				+1.3
1,028,883	+				+1.0
1,028,883	+				+0.1
1,028,883	+				+0.8
1,028,883	+				-0.8
1,028,883	+				-0.2
1,028,883	+				+0.9
1,028,884	-				-2.4
1,028,884	-				-1.8
1,028,884	-				-1.9
1,028,884	-				+1.3
1,028,884	-				+0.0
1,028,884	-				-1.0
1,028,884	-				-0.3
1,028,884	-				+1.6
1,028,884	-				-1.1
1,028,884	-				+1.0
1,028,884	-				-0.2
1,028,884	-				+1.0
1,028,884	-				-0.9
1,028,884	-				+1.0
1,028,884	-				-0.2
1,028,884	-				+2.5
1,028,888	-				-0.1
1,028,919	+				-0.1
1,028,919	+				-0.5
1,028,919	+				+0.8
1,028,919	+				+0.4
1,028,920	-				-0.5
1,029,076	+		Psyr_0907	0.26	+1.0
1,029,076	+		Psyr_0907	0.26	+0.5
1,029,076	+		Psyr_0907	0.26	-1.0
1,029,077	-		Psyr_0907	0.26	+0.9
1,029,077	-		Psyr_0907	0.26	-0.1
1,029,258	-				-0.5
1,029,258	-				+1.0
1,029,265	+				-0.4
1,029,265	+				-0.4
1,029,326	+				+0.3
1,029,326	+				-0.2
1,029,326	+				-1.0
1,029,326	+				-0.3
1,029,326	+				-0.7
1,029,327	-				-1.0
1,029,327	-				-1.7
1,029,327	-				+2.6
1,029,498	+				-0.9
1,029,507	+				-0.7
1,029,507	+				+0.4
1,029,507	+				-1.7
1,029,508	-				+0.0
1,029,508	-				-0.3