Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5090

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
6,038,226	+		Psyr_5089	0.14	-2.9
6,038,227	-		Psyr_5089	0.14	-2.7
6,038,227	-		Psyr_5089	0.14	-1.6
6,038,483	+		Psyr_5089	0.38	-3.1
6,038,483	+		Psyr_5089	0.38	-4.3
6,038,483	+		Psyr_5089	0.38	-4.6
6,038,483	+		Psyr_5089	0.38	-2.8
6,038,483	+		Psyr_5089	0.38	-3.7
6,038,484	-		Psyr_5089	0.38	-4.1
6,038,484	-		Psyr_5089	0.38	-4.3
6,038,484	-		Psyr_5089	0.38	-1.7
6,038,926	-		Psyr_5089	0.79	-2.4
6,038,926	-		Psyr_5089	0.79	-3.5
6,039,182	+				-1.0
6,039,182	+				-2.4
6,039,182	+				-4.1
6,039,182	+				-3.4
6,039,182	+				-1.2
6,039,183	-				-1.1
6,039,183	-				-1.2
6,039,183	-				-0.4
6,039,189	+				-4.2
6,039,189	+				-3.4
6,039,189	+				-0.9
6,039,189	+				-3.6
6,039,189	+				-3.6
6,039,189	+				-2.2
6,039,190	-				+0.2
6,039,190	-				-1.2
6,039,241	-				-1.7
6,039,466	-		Psyr_5090	0.21	-3.3
6,039,524	+		Psyr_5090	0.25	-3.7
6,039,524	+		Psyr_5090	0.25	-1.2
6,039,524	+		Psyr_5090	0.25	-3.1
6,039,524	+		Psyr_5090	0.25	-2.3
6,039,524	+		Psyr_5090	0.25	-4.1
6,039,524	+		Psyr_5090	0.25	-1.4
6,039,524	+		Psyr_5090	0.25	-1.1
6,039,525	-		Psyr_5090	0.25	-3.3
6,039,525	-		Psyr_5090	0.25	-1.0
6,039,525	-		Psyr_5090	0.25	-2.2
6,039,567	+		Psyr_5090	0.28	-1.9
6,039,567	+		Psyr_5090	0.28	-2.2
6,039,567	+		Psyr_5090	0.28	-3.1
6,039,567	+		Psyr_5090	0.28	-1.9
6,039,567	+		Psyr_5090	0.28	-2.0
6,039,568	-		Psyr_5090	0.28	-1.9
6,039,568	-				-1.4
6,039,610	+		Psyr_5090	0.32	-3.1
6,039,610	+		Psyr_5090	0.32	-5.6
6,039,611	-		Psyr_5090	0.32	-1.2
6,039,613	-		Psyr_5090	0.32	-2.0
6,039,751	-		Psyr_5090	0.43	-2.2
6,039,751	-		Psyr_5090	0.43	-3.2
6,039,751	-		Psyr_5090	0.43	-3.0
6,039,793	+		Psyr_5090	0.46	-3.8
6,039,793	+		Psyr_5090	0.46	-4.7
6,040,376	+				-4.3
6,040,376	+				-2.0
6,040,376	+				-2.3
6,040,377	-				-3.0
6,040,469	+				-3.7
6,040,469	+				-2.8
6,040,469	+				-2.9
6,040,470	-				-3.7
6,040,470	-				-4.4
6,040,514	+				-4.2
6,040,514	+				-3.9
6,040,514	+				-2.2
6,040,665	+				-2.2
6,040,665	+				-2.2
6,040,665	+				-4.5
6,040,665	+				-3.3
6,040,665	+				-3.6
6,040,665	+				-2.7
6,040,665	+				-3.9
6,040,665	+				-2.9
6,040,665	+				-0.3
6,040,665	+				-4.7
6,040,666	-				-3.8
6,040,666	-				-1.6
6,040,666	-				-3.4
6,040,666	-				-3.5
6,040,666	-				-4.3
6,040,666	-				-3.5
6,040,666	-				-4.5
6,040,666	-				-3.9
6,040,666	-				-2.0
6,040,666	-				-2.4
6,040,666	-				-2.5
6,040,666	-				-4.2
6,040,666	-				-0.9
6,040,666	-				-2.6
6,040,666	-				-3.6
6,040,666	-				-2.6
6,040,666	-				-4.3
6,040,726	+		Psyr_5091	0.12	-4.3
6,040,773	+		Psyr_5091	0.14	-2.4
6,040,773	+		Psyr_5091	0.14	-1.2
6,040,773	+		Psyr_5091	0.14	-3.8
6,040,773	+		Psyr_5091	0.14	-3.9
6,040,773	+		Psyr_5091	0.14	-5.1
6,040,773	+		Psyr_5091	0.14	-3.9
6,040,773	+		Psyr_5091	0.14	-4.7
6,040,773	+		Psyr_5091	0.14	-1.0
6,040,773	+		Psyr_5091	0.14	-3.3
6,040,773	+		Psyr_5091	0.14	-5.4
6,040,774	-		Psyr_5091	0.14	-4.3
6,040,774	-		Psyr_5091	0.14	-2.8
6,040,774	-		Psyr_5091	0.14	-1.2
6,040,774	-		Psyr_5091	0.14	-4.4
6,040,774	-		Psyr_5091	0.14	-3.3
6,040,774	-		Psyr_5091	0.14	-4.4
6,040,774	-		Psyr_5091	0.14	-1.6
6,040,774	-		Psyr_5091	0.14	-2.7
6,040,774	-		Psyr_5091	0.14	-2.6
6,040,774	-		Psyr_5091	0.14	-3.0
6,040,774	-		Psyr_5091	0.14	-2.4
6,040,774	-		Psyr_5091	0.14	-3.2
6,040,774	-		Psyr_5091	0.14	-1.9
6,040,774	-		Psyr_5091	0.14	-3.2
6,040,902	+		Psyr_5091	0.22	-3.4
6,040,902	+		Psyr_5091	0.22	-4.0
6,040,902	+		Psyr_5091	0.22	-2.6
6,040,902	+		Psyr_5091	0.22	-4.4
6,040,902	+		Psyr_5091	0.22	-2.3
6,040,902	+		Psyr_5091	0.22	-3.8
6,040,902	+		Psyr_5091	0.22	-0.8
6,040,902	+		Psyr_5091	0.22	-4.1
6,040,902	+		Psyr_5091	0.22	-4.5
6,040,903	-		Psyr_5091	0.22	-2.4
6,040,903	-		Psyr_5091	0.22	-3.6
6,040,903	-		Psyr_5091	0.22	-1.6
6,040,903	-		Psyr_5091	0.22	-2.8
6,040,903	-		Psyr_5091	0.22	-3.6
6,040,903	-		Psyr_5091	0.22	-1.7
6,040,903	-		Psyr_5091	0.22	-1.9
6,040,903	-		Psyr_5091	0.22	-2.7
6,041,114	+		Psyr_5091	0.34	-2.9
6,041,115	-		Psyr_5091	0.34	-4.4
6,041,115	-		Psyr_5091	0.34	-4.8
6,041,115	-		Psyr_5091	0.34	-3.7
6,041,205	+		Psyr_5091	0.39	-2.9
6,041,205	+		Psyr_5091	0.39	-3.6
6,041,205	+		Psyr_5091	0.39	-2.7
6,041,205	+		Psyr_5091	0.39	-4.6
6,041,400	+		Psyr_5091	0.50	-3.1
6,041,400	+		Psyr_5091	0.50	-2.8
6,041,400	+		Psyr_5091	0.50	-1.0
6,041,400	+		Psyr_5091	0.50	-0.9
6,041,400	+		Psyr_5091	0.50	-1.9
6,041,400	+		Psyr_5091	0.50	-1.2
6,041,400	+		Psyr_5091	0.50	-2.9
6,041,400	+		Psyr_5091	0.50	-4.1
6,041,400	+		Psyr_5091	0.50	-1.5
6,041,400	+		Psyr_5091	0.50	-2.9
6,041,401	-		Psyr_5091	0.50	-1.3
6,041,401	-		Psyr_5091	0.50	+0.1
6,041,401	-		Psyr_5091	0.50	-0.4
6,041,401	-		Psyr_5091	0.50	-2.0
6,041,401	-		Psyr_5091	0.50	-1.2
6,041,401	-		Psyr_5091	0.50	-3.6
6,041,401	-		Psyr_5091	0.50	-1.4
6,041,401	-		Psyr_5091	0.50	-2.5
6,041,493	+		Psyr_5091	0.55	-1.4
6,041,493	+		Psyr_5091	0.55	-3.9
6,041,494	-		Psyr_5091	0.55	-4.7
6,041,494	-		Psyr_5091	0.55	-2.3