Experiment: MBOA 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4619 and Psyr_4620 are separated by 114 nucleotides Psyr_4620 and Psyr_4621 are separated by 21 nucleotides Psyr_4621 and Psyr_4622 are separated by 0 nucleotides
Psyr_4619: Psyr_4619 - multi-sensor signal transduction histidine kinase, at 5,476,726 to 5,478,738
_4619
Psyr_4620: Psyr_4620 - conserved hypothetical protein, at 5,478,853 to 5,479,857
_4620
Psyr_4621: Psyr_4621 - Heat shock protein DnaJ, N-terminal, at 5,479,879 to 5,480,646
_4621
Psyr_4622: Psyr_4622 - Nucleotidyl transferase, at 5,480,647 to 5,481,369
_4622
Position (kb) 5478
5479
5480 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5478.241 kb on - strand, within Psyr_4619 at 5478.344 kb on + strand, within Psyr_4619 at 5478.345 kb on - strand, within Psyr_4619 at 5478.670 kb on - strand at 5478.711 kb on + strand at 5478.742 kb on + strand at 5478.742 kb on + strand at 5478.742 kb on + strand at 5478.742 kb on + strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.743 kb on - strand at 5478.818 kb on - strand at 5478.848 kb on - strand at 5478.859 kb on + strand at 5478.860 kb on - strand at 5478.902 kb on + strand at 5479.022 kb on + strand, within Psyr_4620 at 5479.023 kb on - strand, within Psyr_4620 at 5479.257 kb on + strand, within Psyr_4620 at 5479.617 kb on + strand, within Psyr_4620 at 5479.618 kb on - strand, within Psyr_4620 at 5479.664 kb on + strand, within Psyr_4620 at 5479.665 kb on - strand, within Psyr_4620 at 5479.665 kb on - strand, within Psyr_4620 at 5479.665 kb on - strand, within Psyr_4620 at 5479.685 kb on - strand, within Psyr_4620 at 5479.685 kb on - strand, within Psyr_4620 at 5479.731 kb on + strand, within Psyr_4620 at 5479.811 kb on + strand at 5479.812 kb on - strand at 5479.812 kb on - strand at 5479.812 kb on - strand at 5479.812 kb on - strand at 5479.836 kb on - strand at 5479.836 kb on - strand at 5479.836 kb on - strand at 5479.855 kb on + strand at 5479.856 kb on - strand at 5480.087 kb on + strand, within Psyr_4621 at 5480.088 kb on - strand, within Psyr_4621 at 5480.088 kb on - strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.259 kb on + strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.260 kb on - strand, within Psyr_4621 at 5480.300 kb on + strand, within Psyr_4621 at 5480.301 kb on - strand, within Psyr_4621 at 5480.301 kb on - strand, within Psyr_4621 at 5480.412 kb on + strand, within Psyr_4621 at 5480.723 kb on + strand, within Psyr_4622 at 5480.724 kb on - strand, within Psyr_4622 at 5480.840 kb on + strand, within Psyr_4622 at 5480.840 kb on + strand, within Psyr_4622 at 5480.841 kb on - strand, within Psyr_4622 at 5480.841 kb on - strand, within Psyr_4622
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 0.5 mM remove 5,478,241 - Psyr_4619 0.75 -0.0 5,478,344 + Psyr_4619 0.80 -0.3 5,478,345 - Psyr_4619 0.80 -0.2 5,478,670 - -0.1 5,478,711 + +0.1 5,478,742 + +0.2 5,478,742 + +0.6 5,478,742 + -1.8 5,478,742 + -0.1 5,478,743 - +0.4 5,478,743 - +0.0 5,478,743 - +0.4 5,478,743 - +0.3 5,478,743 - -0.4 5,478,743 - -1.3 5,478,743 - -1.0 5,478,818 - +0.6 5,478,848 - +0.2 5,478,859 + +1.4 5,478,860 - -0.6 5,478,902 + +0.7 5,479,022 + Psyr_4620 0.17 +0.1 5,479,023 - Psyr_4620 0.17 -3.3 5,479,257 + Psyr_4620 0.40 -1.1 5,479,617 + Psyr_4620 0.76 -0.6 5,479,618 - Psyr_4620 0.76 -1.0 5,479,664 + Psyr_4620 0.81 -0.1 5,479,665 - Psyr_4620 0.81 -1.0 5,479,665 - Psyr_4620 0.81 +0.3 5,479,665 - Psyr_4620 0.81 +0.7 5,479,685 - Psyr_4620 0.83 +0.0 5,479,685 - Psyr_4620 0.83 -0.7 5,479,731 + Psyr_4620 0.87 -0.4 5,479,811 + +0.2 5,479,812 - +0.5 5,479,812 - +0.9 5,479,812 - -0.1 5,479,812 - +0.1 5,479,836 - -0.7 5,479,836 - +0.4 5,479,836 - +1.0 5,479,855 + -0.8 5,479,856 - +0.6 5,480,087 + Psyr_4621 0.27 +0.1 5,480,088 - Psyr_4621 0.27 -0.1 5,480,088 - Psyr_4621 0.27 -0.1 5,480,259 + Psyr_4621 0.49 -0.6 5,480,259 + Psyr_4621 0.49 -0.6 5,480,259 + Psyr_4621 0.49 -1.4 5,480,259 + Psyr_4621 0.49 +2.7 5,480,259 + Psyr_4621 0.49 +0.5 5,480,259 + Psyr_4621 0.49 -0.7 5,480,259 + Psyr_4621 0.49 +0.3 5,480,259 + Psyr_4621 0.49 -0.9 5,480,259 + Psyr_4621 0.49 +2.1 5,480,260 - Psyr_4621 0.50 -1.6 5,480,260 - Psyr_4621 0.50 +0.1 5,480,260 - Psyr_4621 0.50 -0.1 5,480,260 - Psyr_4621 0.50 -0.8 5,480,260 - Psyr_4621 0.50 -0.1 5,480,260 - Psyr_4621 0.50 +0.1 5,480,260 - Psyr_4621 0.50 -0.6 5,480,260 - Psyr_4621 0.50 -0.9 5,480,260 - Psyr_4621 0.50 -1.9 5,480,260 - Psyr_4621 0.50 +1.4 5,480,300 + Psyr_4621 0.55 -0.8 5,480,301 - Psyr_4621 0.55 +1.1 5,480,301 - Psyr_4621 0.55 +0.5 5,480,412 + Psyr_4621 0.69 +0.5 5,480,723 + Psyr_4622 0.11 -2.3 5,480,724 - Psyr_4622 0.11 +0.1 5,480,840 + Psyr_4622 0.27 +0.1 5,480,840 + Psyr_4622 0.27 +1.1 5,480,841 - Psyr_4622 0.27 +1.1 5,480,841 - Psyr_4622 0.27 +0.1
Or see this region's nucleotide sequence