Experiment: MBOA 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3569 and Psyr_3570 overlap by 4 nucleotides Psyr_3570 and Psyr_3571 are separated by 76 nucleotides Psyr_3571 and Psyr_3572 are separated by 531 nucleotides
Psyr_3569: Psyr_3569 - L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein, at 4,250,963 to 4,251,661
_3569
Psyr_3570: Psyr_3570 - L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein, at 4,251,658 to 4,252,347
_3570
Psyr_3571: Psyr_3571 - L-arginine-binding protein / L-ornithine-binding protein, at 4,252,424 to 4,253,200
_3571
Psyr_3572: Psyr_3572 - acetyl-coenzyme A synthetase, at 4,253,732 to 4,255,687
_3572
Position (kb) 4252
4253
4254 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4251.436 kb on - strand, within Psyr_3569 at 4251.436 kb on - strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.438 kb on + strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.439 kb on - strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.483 kb on + strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.484 kb on - strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.489 kb on + strand, within Psyr_3569 at 4251.490 kb on - strand, within Psyr_3569 at 4251.648 kb on + strand at 4251.649 kb on - strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.661 kb on + strand at 4251.662 kb on - strand at 4251.743 kb on + strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.744 kb on - strand, within Psyr_3570 at 4251.956 kb on + strand, within Psyr_3570 at 4251.957 kb on - strand, within Psyr_3570 at 4252.025 kb on + strand, within Psyr_3570 at 4252.025 kb on + strand, within Psyr_3570 at 4252.038 kb on + strand, within Psyr_3570 at 4252.039 kb on - strand, within Psyr_3570 at 4252.193 kb on + strand, within Psyr_3570 at 4252.194 kb on - strand, within Psyr_3570 at 4252.373 kb on - strand at 4252.425 kb on + strand at 4252.425 kb on + strand at 4252.426 kb on - strand at 4252.426 kb on - strand at 4252.452 kb on + strand at 4252.452 kb on + strand at 4252.453 kb on - strand at 4252.453 kb on - strand at 4252.473 kb on + strand at 4252.473 kb on + strand at 4252.473 kb on + strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.474 kb on - strand at 4252.573 kb on - strand, within Psyr_3571 at 4252.598 kb on + strand, within Psyr_3571 at 4252.599 kb on - strand, within Psyr_3571 at 4252.599 kb on - strand, within Psyr_3571 at 4252.702 kb on - strand, within Psyr_3571 at 4252.702 kb on - strand, within Psyr_3571 at 4252.723 kb on - strand, within Psyr_3571 at 4252.793 kb on + strand, within Psyr_3571 at 4252.878 kb on + strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.879 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.882 kb on - strand, within Psyr_3571 at 4252.976 kb on - strand, within Psyr_3571 at 4253.387 kb on + strand at 4253.388 kb on - strand at 4253.388 kb on - strand at 4253.462 kb on + strand at 4253.462 kb on + strand at 4253.510 kb on + strand at 4253.545 kb on + strand at 4253.571 kb on + strand at 4253.644 kb on + strand at 4253.644 kb on + strand at 4253.645 kb on - strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.646 kb on + strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.647 kb on - strand at 4253.649 kb on - strand at 4253.820 kb on + strand at 4253.821 kb on - strand at 4254.003 kb on + strand, within Psyr_3572 at 4254.003 kb on + strand, within Psyr_3572 at 4254.003 kb on + strand, within Psyr_3572 at 4254.003 kb on + strand, within Psyr_3572 at 4254.003 kb on + strand, within Psyr_3572 at 4254.004 kb on - strand, within Psyr_3572 at 4254.004 kb on - strand, within Psyr_3572 at 4254.004 kb on - strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.009 kb on + strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.010 kb on - strand, within Psyr_3572 at 4254.163 kb on - strand, within Psyr_3572
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 0.5 mM remove 4,251,436 - Psyr_3569 0.68 -0.4 4,251,436 - Psyr_3569 0.68 +0.8 4,251,438 + Psyr_3569 0.68 +1.9 4,251,438 + Psyr_3569 0.68 +0.6 4,251,438 + Psyr_3569 0.68 +0.9 4,251,439 - Psyr_3569 0.68 +0.1 4,251,439 - Psyr_3569 0.68 -2.7 4,251,439 - Psyr_3569 0.68 +0.0 4,251,483 + Psyr_3569 0.74 +1.2 4,251,483 + Psyr_3569 0.74 -1.3 4,251,483 + Psyr_3569 0.74 +1.1 4,251,483 + Psyr_3569 0.74 +0.0 4,251,483 + Psyr_3569 0.74 -0.8 4,251,484 - Psyr_3569 0.75 +0.4 4,251,484 - Psyr_3569 0.75 +0.8 4,251,484 - Psyr_3569 0.75 +1.2 4,251,484 - Psyr_3569 0.75 +0.6 4,251,484 - Psyr_3569 0.75 +0.2 4,251,484 - Psyr_3569 0.75 -3.4 4,251,489 + Psyr_3569 0.75 -1.0 4,251,489 + Psyr_3569 0.75 +1.0 4,251,489 + Psyr_3569 0.75 -0.4 4,251,490 - Psyr_3569 0.75 +0.3 4,251,648 + -0.2 4,251,649 - -0.8 4,251,661 + -0.9 4,251,661 + +1.1 4,251,661 + +0.3 4,251,661 + -0.1 4,251,661 + -1.1 4,251,661 + +0.8 4,251,661 + +0.9 4,251,662 - +0.5 4,251,743 + Psyr_3570 0.12 -0.1 4,251,744 - Psyr_3570 0.12 -0.4 4,251,744 - Psyr_3570 0.12 +0.2 4,251,744 - Psyr_3570 0.12 +0.5 4,251,744 - Psyr_3570 0.12 +0.3 4,251,956 + Psyr_3570 0.43 +0.6 4,251,957 - Psyr_3570 0.43 +0.2 4,252,025 + Psyr_3570 0.53 -1.9 4,252,025 + Psyr_3570 0.53 +0.0 4,252,038 + Psyr_3570 0.55 +0.7 4,252,039 - Psyr_3570 0.55 -0.1 4,252,193 + Psyr_3570 0.78 -0.9 4,252,194 - Psyr_3570 0.78 +0.9 4,252,373 - -0.7 4,252,425 + -0.3 4,252,425 + +0.8 4,252,426 - -0.8 4,252,426 - -0.1 4,252,452 + +0.9 4,252,452 + +1.3 4,252,453 - +0.3 4,252,453 - -0.2 4,252,473 + -1.6 4,252,473 + +0.6 4,252,473 + -0.7 4,252,474 - +0.4 4,252,474 - -0.3 4,252,474 - -0.1 4,252,474 - +0.7 4,252,474 - +1.3 4,252,573 - Psyr_3571 0.19 +0.3 4,252,598 + Psyr_3571 0.22 +1.9 4,252,599 - Psyr_3571 0.23 +0.9 4,252,599 - Psyr_3571 0.23 +0.1 4,252,702 - Psyr_3571 0.36 -0.1 4,252,702 - Psyr_3571 0.36 +0.8 4,252,723 - Psyr_3571 0.38 +0.3 4,252,793 + Psyr_3571 0.47 +0.3 4,252,878 + Psyr_3571 0.58 -0.4 4,252,879 - Psyr_3571 0.59 +0.7 4,252,879 - Psyr_3571 0.59 +0.1 4,252,879 - Psyr_3571 0.59 +0.0 4,252,879 - Psyr_3571 0.59 -0.0 4,252,879 - Psyr_3571 0.59 +0.4 4,252,882 - Psyr_3571 0.59 -0.2 4,252,882 - Psyr_3571 0.59 +0.9 4,252,882 - Psyr_3571 0.59 +0.5 4,252,882 - Psyr_3571 0.59 -0.1 4,252,882 - Psyr_3571 0.59 +0.6 4,252,976 - Psyr_3571 0.71 +1.3 4,253,387 + -1.0 4,253,388 - +1.0 4,253,388 - +1.1 4,253,462 + -0.6 4,253,462 + +0.5 4,253,510 + +0.2 4,253,545 + -0.7 4,253,571 + +1.0 4,253,644 + -0.1 4,253,644 + +0.7 4,253,645 - -0.8 4,253,646 + +0.6 4,253,646 + +0.3 4,253,646 + -1.2 4,253,646 + -0.5 4,253,646 + +1.3 4,253,646 + +0.8 4,253,646 + +0.4 4,253,646 + +1.1 4,253,646 + -0.0 4,253,646 + -0.1 4,253,646 + +0.9 4,253,646 + +0.9 4,253,646 + +0.0 4,253,646 + -0.2 4,253,646 + +2.4 4,253,646 + +0.3 4,253,646 + +1.9 4,253,647 - -0.1 4,253,647 - -0.6 4,253,647 - +0.4 4,253,647 - -0.2 4,253,647 - -1.3 4,253,647 - +0.4 4,253,647 - -0.1 4,253,647 - -0.3 4,253,647 - -0.0 4,253,647 - +1.1 4,253,647 - -1.9 4,253,647 - -0.8 4,253,647 - -1.1 4,253,647 - -1.5 4,253,647 - -0.2 4,253,647 - -0.9 4,253,647 - -0.4 4,253,647 - -0.6 4,253,647 - -0.8 4,253,647 - +0.1 4,253,647 - -0.1 4,253,649 - +0.0 4,253,820 + +0.0 4,253,821 - +2.3 4,254,003 + Psyr_3572 0.14 +0.4 4,254,003 + Psyr_3572 0.14 +0.3 4,254,003 + Psyr_3572 0.14 -0.8 4,254,003 + Psyr_3572 0.14 -0.3 4,254,003 + Psyr_3572 0.14 +0.6 4,254,004 - Psyr_3572 0.14 -0.8 4,254,004 - Psyr_3572 0.14 -1.1 4,254,004 - Psyr_3572 0.14 -0.9 4,254,009 + Psyr_3572 0.14 +1.3 4,254,009 + Psyr_3572 0.14 +0.1 4,254,009 + Psyr_3572 0.14 +0.7 4,254,009 + Psyr_3572 0.14 -0.6 4,254,009 + Psyr_3572 0.14 -0.3 4,254,009 + Psyr_3572 0.14 +1.2 4,254,009 + Psyr_3572 0.14 -1.6 4,254,009 + Psyr_3572 0.14 +0.0 4,254,009 + Psyr_3572 0.14 -0.1 4,254,009 + Psyr_3572 0.14 +0.6 4,254,010 - Psyr_3572 0.14 +0.4 4,254,010 - Psyr_3572 0.14 +0.4 4,254,010 - Psyr_3572 0.14 -0.3 4,254,010 - Psyr_3572 0.14 -0.7 4,254,010 - Psyr_3572 0.14 -0.3 4,254,010 - Psyr_3572 0.14 +0.3 4,254,010 - Psyr_3572 0.14 -0.2 4,254,010 - Psyr_3572 0.14 -0.7 4,254,163 - Psyr_3572 0.22 +0.1
Or see this region's nucleotide sequence