Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1869

Experiment: MBOA 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 0.5 mM
2,143,241	+				+0.9
2,143,247	+				+0.2
2,143,248	-				+1.4
2,143,323	+				-0.8
2,143,323	+				-0.9
2,143,323	+				+0.8
2,143,324	-				-2.3
2,143,324	-				+0.4
2,143,324	-				+1.1
2,143,324	-				+0.1
2,143,324	-				-0.2
2,143,324	-				-0.8
2,143,350	-				+0.1
2,143,407	+				+0.6
2,143,407	+				+0.2
2,143,408	-				-1.6
2,143,408	-				+0.1
2,143,408	-				-0.3
2,143,411	+				+0.1
2,143,411	+				-0.3
2,143,411	+				-1.0
2,143,411	+				+0.5
2,143,412	-				-1.4
2,143,412	-				+0.2
2,143,412	-				-0.2
2,143,412	-				+0.7
2,143,412	-				+0.9
2,143,412	-				+0.6
2,143,421	+				-0.2
2,143,421	+				+0.2
2,143,422	-				-0.4
2,143,422	-				-0.7
2,143,447	+				-0.0
2,143,467	+				-1.7
2,143,467	+				+0.8
2,143,468	-				+0.4
2,143,468	-				-0.6
2,143,472	+		Psyr_1867	0.11	-0.3
2,143,472	+		Psyr_1867	0.11	-0.0
2,143,516	+		Psyr_1867	0.24	-1.6
2,143,517	-		Psyr_1867	0.24	-0.5
2,143,613	+		Psyr_1867	0.52	+0.4
2,143,614	-		Psyr_1867	0.52	+0.5
2,143,614	-		Psyr_1867	0.52	-0.8
2,143,614	-		Psyr_1867	0.52	-0.1
2,143,614	-		Psyr_1867	0.52	+0.0
2,143,614	-		Psyr_1867	0.52	+0.0
2,143,657	+		Psyr_1867	0.65	-0.2
2,143,658	-		Psyr_1867	0.65	+0.5
2,143,658	-		Psyr_1867	0.65	+0.6
2,143,658	-		Psyr_1867	0.65	-1.9
2,143,658	-		Psyr_1867	0.65	-0.7
2,143,666	+		Psyr_1867	0.68	+0.6
2,143,666	+		Psyr_1867	0.68	+1.1
2,143,667	-		Psyr_1867	0.68	+0.0
2,143,667	-		Psyr_1867	0.68	-0.5
2,143,716	+		Psyr_1867	0.82	-0.9
2,143,717	-		Psyr_1867	0.82	-1.6
2,143,798	+		Psyr_1868	0.18	-0.1
2,143,798	+		Psyr_1868	0.18	-0.3
2,143,799	-				-0.0
2,143,799	-		Psyr_1868	0.18	+0.7
2,143,917	-		Psyr_1868	0.54	-0.4
2,143,952	+		Psyr_1868	0.64	+0.8
2,144,017	+		Psyr_1868	0.83	+0.9
2,144,018	-		Psyr_1868	0.84	+1.1
2,144,018	-		Psyr_1868	0.84	+0.6
2,144,018	-		Psyr_1868	0.84	+0.8
2,144,018	-		Psyr_1868	0.84	-1.2
2,144,018	-		Psyr_1868	0.84	+0.4
2,144,018	-		Psyr_1868	0.84	-0.3
2,144,046	+				-0.4
2,144,046	+				-1.9
2,144,057	+				-0.9
2,144,057	+				+0.4
2,144,058	-				-0.1
2,144,265	+				-1.6
2,144,265	+				-0.8
2,144,265	+				-1.0
2,144,265	+				+1.7
2,144,265	+				+0.6
2,144,265	+				-1.4
2,144,266	-				+0.9
2,144,266	-				+0.3
2,144,266	-				+1.1
2,144,266	-				-0.7
2,144,266	-				-0.1
2,144,282	-				-0.7
2,144,282	-				-1.4
2,144,324	+				+0.7
2,144,325	-				+0.1
2,144,325	-				+0.3
2,144,325	-				-1.0
2,144,325	-				+1.1
2,144,403	+		Psyr_1869	0.12	-0.0
2,144,403	+		Psyr_1869	0.12	-0.8
2,144,403	+		Psyr_1869	0.12	+0.1
2,144,403	+		Psyr_1869	0.12	+0.6
2,144,403	+		Psyr_1869	0.12	-0.4
2,144,403	+		Psyr_1869	0.12	-0.3
2,144,403	+		Psyr_1869	0.12	+0.0
2,144,403	+		Psyr_1869	0.12	-0.4
2,144,403	+		Psyr_1869	0.12	+0.4
2,144,404	-		Psyr_1869	0.12	+0.3
2,144,558	+		Psyr_1869	0.23	-0.2
2,144,608	-		Psyr_1869	0.26	+1.2
2,144,650	-		Psyr_1869	0.29	+0.1
2,144,657	+				-1.4
2,144,657	+		Psyr_1869	0.30	-0.8
2,144,657	+		Psyr_1869	0.30	-0.7
2,144,697	+		Psyr_1869	0.33	-0.0
2,144,697	+		Psyr_1869	0.33	+0.6
2,144,697	+		Psyr_1869	0.33	-0.8
2,144,697	+		Psyr_1869	0.33	-0.3
2,144,697	+		Psyr_1869	0.33	+1.1
2,144,697	+		Psyr_1869	0.33	+0.1
2,144,697	+		Psyr_1869	0.33	-0.1
2,144,697	+		Psyr_1869	0.33	+0.7
2,144,697	+		Psyr_1869	0.33	-0.4
2,144,697	+		Psyr_1869	0.33	+0.7
2,144,697	+		Psyr_1869	0.33	+0.9
2,144,697	+		Psyr_1869	0.33	-1.4
2,144,698	-		Psyr_1869	0.33	-1.4
2,144,698	-		Psyr_1869	0.33	+0.4
2,144,698	-		Psyr_1869	0.33	-0.2
2,144,698	-		Psyr_1869	0.33	-0.3
2,144,698	-		Psyr_1869	0.33	+0.5
2,144,698	-		Psyr_1869	0.33	+0.1
2,144,698	-		Psyr_1869	0.33	-0.2
2,144,698	-		Psyr_1869	0.33	+0.4
2,144,698	-		Psyr_1869	0.33	+1.4
2,144,698	-		Psyr_1869	0.33	+0.4
2,144,698	-		Psyr_1869	0.33	+0.9
2,144,698	-		Psyr_1869	0.33	-0.4
2,144,700	+		Psyr_1869	0.33	-0.4
2,144,700	+		Psyr_1869	0.33	+0.8
2,144,700	+		Psyr_1869	0.33	-1.1
2,144,700	+		Psyr_1869	0.33	+0.7
2,144,700	+		Psyr_1869	0.33	-0.3
2,144,700	+		Psyr_1869	0.33	-0.8
2,144,701	-		Psyr_1869	0.33	+0.1
2,144,701	-		Psyr_1869	0.33	-0.6
2,144,701	-		Psyr_1869	0.33	-0.7
2,144,701	-		Psyr_1869	0.33	+0.4
2,144,701	-		Psyr_1869	0.33	-0.4
2,144,701	-		Psyr_1869	0.33	+0.1
2,144,701	-		Psyr_1869	0.33	-1.0
2,144,742	+		Psyr_1869	0.36	-0.0
2,144,742	+		Psyr_1869	0.36	+0.3
2,144,742	+		Psyr_1869	0.36	+0.1
2,144,742	+		Psyr_1869	0.36	+0.0
2,144,742	+		Psyr_1869	0.36	+0.3
2,144,742	+		Psyr_1869	0.36	-1.9
2,144,742	+		Psyr_1869	0.36	+0.1
2,144,742	+		Psyr_1869	0.36	+0.3
2,144,742	+		Psyr_1869	0.36	+0.2
2,144,743	-		Psyr_1869	0.36	-1.2
2,144,743	-		Psyr_1869	0.36	-0.9
2,144,743	-		Psyr_1869	0.36	+0.6
2,144,743	-		Psyr_1869	0.36	+0.3
2,144,743	-		Psyr_1869	0.36	+0.0
2,144,743	-		Psyr_1869	0.36	-1.3
2,144,743	-		Psyr_1869	0.36	-1.3
2,145,042	+		Psyr_1869	0.57	+0.5
2,145,042	+		Psyr_1869	0.57	-1.7
2,145,043	-		Psyr_1869	0.57	+0.6
2,145,043	-		Psyr_1869	0.57	-0.9
2,145,043	-		Psyr_1869	0.57	-0.4
2,145,043	-		Psyr_1869	0.57	+0.3
2,145,198	+		Psyr_1869	0.68	+0.9
2,145,198	+		Psyr_1869	0.68	-0.9
2,145,222	+		Psyr_1869	0.70	+1.6
2,145,222	+		Psyr_1869	0.70	-0.6
2,145,223	-		Psyr_1869	0.70	+0.5
2,145,429	+		Psyr_1869	0.84	+0.1
2,145,429	+		Psyr_1869	0.84	+0.1
2,145,429	+		Psyr_1869	0.84	-0.2
2,145,430	-		Psyr_1869	0.85	+1.3
2,145,430	-		Psyr_1869	0.85	+0.9
2,145,430	-		Psyr_1869	0.85	+1.4
2,145,430	-		Psyr_1869	0.85	-0.1
2,145,500	+		Psyr_1869	0.90	-0.9
2,145,664	+				-0.2
2,145,664	+				+0.0
2,145,665	-				+0.8
2,145,665	-				+1.5
2,145,665	-				-0.9
2,145,669	-				-0.6
2,145,799	+		Psyr_1870	0.14	+1.3
2,145,800	-		Psyr_1870	0.15	+0.4
2,145,800	-		Psyr_1870	0.15	-0.5
2,145,837	+		Psyr_1870	0.18	+1.4
2,145,837	+		Psyr_1870	0.18	-0.6
2,145,837	+		Psyr_1870	0.18	+0.3
2,145,837	+		Psyr_1870	0.18	-0.4
2,145,838	-		Psyr_1870	0.19	-1.9
2,145,838	-		Psyr_1870	0.19	+1.0
2,145,838	-		Psyr_1870	0.19	-0.0
2,145,918	+		Psyr_1870	0.27	-1.0
2,145,918	+		Psyr_1870	0.27	-0.4
2,145,919	-		Psyr_1870	0.27	-0.3
2,145,919	-		Psyr_1870	0.27	-0.6
2,145,919	-		Psyr_1870	0.27	-0.3
2,146,111	-		Psyr_1870	0.47	+0.4
2,146,157	+				-0.1
2,146,158	-		Psyr_1870	0.52	+0.1
2,146,270	-		Psyr_1870	0.64	-0.2
2,146,272	+		Psyr_1870	0.64	+2.0
2,146,272	+		Psyr_1870	0.64	-0.4
2,146,318	-		Psyr_1870	0.69	+1.4
2,146,318	-		Psyr_1870	0.69	+1.3
2,146,318	-		Psyr_1870	0.69	-1.3
2,146,503	+		Psyr_1870	0.88	+0.4
2,146,504	-		Psyr_1870	0.88	+0.1
2,146,603	-				+0.5
2,146,646	+				+1.4
2,146,646	+				-0.3
2,146,647	-				+1.1
2,146,647	-				+0.1