Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5042

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
5,982,918	+		Psyr_5041	0.18	-0.2
5,982,918	+		Psyr_5041	0.18	-2.6
5,982,918	+		Psyr_5041	0.18	-1.6
5,982,918	+		Psyr_5041	0.18	-0.9
5,982,918	+		Psyr_5041	0.18	-3.4
5,982,918	+		Psyr_5041	0.18	-3.3
5,982,918	+		Psyr_5041	0.18	-1.4
5,982,918	+		Psyr_5041	0.18	-1.7
5,982,918	+		Psyr_5041	0.18	-0.8
5,982,918	+		Psyr_5041	0.18	-1.5
5,982,918	+		Psyr_5041	0.18	-3.0
5,982,919	-		Psyr_5041	0.19	-1.3
5,982,919	-		Psyr_5041	0.19	-1.7
5,982,919	-		Psyr_5041	0.19	-2.8
5,982,919	-		Psyr_5041	0.19	-1.7
5,982,919	-		Psyr_5041	0.19	-0.9
5,982,919	-		Psyr_5041	0.19	-1.9
5,982,919	-		Psyr_5041	0.19	-3.1
5,982,919	-		Psyr_5041	0.19	-1.7
5,982,919	-		Psyr_5041	0.19	-0.7
5,982,919	-		Psyr_5041	0.19	-2.2
5,982,919	-		Psyr_5041	0.19	-0.4
5,982,919	-		Psyr_5041	0.19	-1.6
5,982,919	-		Psyr_5041	0.19	-1.3
5,982,919	-		Psyr_5041	0.19	-1.1
5,982,919	-		Psyr_5041	0.19	-1.8
5,982,919	-		Psyr_5041	0.19	-3.0
5,982,919	-		Psyr_5041	0.19	-1.9
5,982,924	+		Psyr_5041	0.19	-1.8
5,982,924	+		Psyr_5041	0.19	-0.2
5,982,924	+		Psyr_5041	0.19	-2.9
5,982,925	-		Psyr_5041	0.19	-0.7
5,982,925	-		Psyr_5041	0.19	-2.0
5,982,925	-		Psyr_5041	0.19	-1.4
5,982,925	-		Psyr_5041	0.19	-2.5
5,982,946	-		Psyr_5041	0.21	-1.4
5,982,962	-		Psyr_5041	0.23	-0.9
5,983,038	+		Psyr_5041	0.30	-2.1
5,983,164	+		Psyr_5041	0.43	-1.8
5,983,164	+		Psyr_5041	0.43	-1.2
5,983,170	+		Psyr_5041	0.44	-2.1
5,983,170	+		Psyr_5041	0.44	-3.0
5,983,170	+		Psyr_5041	0.44	-0.9
5,983,170	+		Psyr_5041	0.44	-0.6
5,983,170	+		Psyr_5041	0.44	-3.4
5,983,171	-		Psyr_5041	0.44	-0.8
5,983,171	-		Psyr_5041	0.44	-2.5
5,983,171	-		Psyr_5041	0.44	-0.2
5,983,171	-		Psyr_5041	0.44	-2.2
5,983,171	-		Psyr_5041	0.44	-1.9
5,983,171	-		Psyr_5041	0.44	-1.2
5,983,189	+		Psyr_5041	0.46	-3.0
5,983,189	+		Psyr_5041	0.46	-1.6
5,983,189	+		Psyr_5041	0.46	-2.3
5,983,189	+		Psyr_5041	0.46	-2.8
5,983,189	+		Psyr_5041	0.46	-1.6
5,983,190	-		Psyr_5041	0.46	-3.9
5,983,396	-		Psyr_5041	0.66	-1.7
5,983,548	+		Psyr_5041	0.81	-2.2
5,983,548	+		Psyr_5041	0.81	-0.3
5,983,635	+				-1.3
5,983,635	+				-1.8
5,983,636	-				+0.1
5,983,636	-				-1.4
5,983,636	-				-0.3
5,983,793	+				-0.8
5,983,793	+				-2.5
5,983,793	+				-3.3
5,983,794	-				-0.5
5,983,794	-				+0.8
5,983,794	-				-0.4
5,983,794	-				+1.0
5,983,794	-				+2.4
5,983,798	+				-2.3
5,983,798	+				-3.2
5,983,798	+				-1.5
5,983,798	+				-0.6
5,983,799	-				+0.7
5,983,809	+				-4.4
5,983,810	-				+0.1
5,983,817	+				-2.4
5,983,818	-				+0.9
5,983,818	-				+0.5
5,983,818	-				-0.6
5,983,818	-				-0.4
5,983,847	+				+0.4
5,983,848	-				-0.1
5,983,848	-				+0.4
5,983,848	-				+0.5
5,983,852	-				+0.5
5,983,852	-				-0.5
5,983,963	+				-0.6
5,983,964	-				+0.1
5,984,038	+		Psyr_5042	0.11	+2.0
5,984,039	-		Psyr_5042	0.11	+0.4
5,984,050	+		Psyr_5042	0.12	-0.2
5,984,050	+		Psyr_5042	0.12	-0.1
5,984,051	-		Psyr_5042	0.12	-1.9
5,984,051	-		Psyr_5042	0.12	-0.8
5,984,051	-		Psyr_5042	0.12	+0.6
5,984,051	-		Psyr_5042	0.12	+0.6
5,984,051	-		Psyr_5042	0.12	-1.2
5,984,108	-		Psyr_5042	0.16	-0.6
5,984,108	-		Psyr_5042	0.16	-0.2
5,984,108	-		Psyr_5042	0.16	-0.5
5,984,108	-		Psyr_5042	0.16	-0.1
5,984,126	+		Psyr_5042	0.18	-1.9
5,984,152	+		Psyr_5042	0.20	-0.0
5,984,152	+		Psyr_5042	0.20	-3.2
5,984,153	-		Psyr_5042	0.20	+0.1
5,984,194	+		Psyr_5042	0.23	-0.5
5,984,194	+		Psyr_5042	0.23	+1.1
5,984,194	+		Psyr_5042	0.23	+0.8
5,984,194	+		Psyr_5042	0.23	+1.0
5,984,194	+		Psyr_5042	0.23	-0.0
5,984,194	+		Psyr_5042	0.23	+0.0
5,984,194	+		Psyr_5042	0.23	+0.4
5,984,195	-		Psyr_5042	0.23	+1.1
5,984,195	-		Psyr_5042	0.23	-0.5
5,984,195	-		Psyr_5042	0.23	+1.0
5,984,195	-		Psyr_5042	0.23	+0.3
5,984,195	-		Psyr_5042	0.23	+2.4
5,984,195	-		Psyr_5042	0.23	+1.4
5,984,195	-		Psyr_5042	0.23	+0.1
5,984,195	-		Psyr_5042	0.23	+0.0
5,984,195	-		Psyr_5042	0.23	-0.1
5,984,353	+		Psyr_5042	0.35	+0.3
5,984,353	+		Psyr_5042	0.35	-0.6
5,984,353	+		Psyr_5042	0.35	+0.7
5,984,353	+		Psyr_5042	0.35	+0.5
5,984,354	-		Psyr_5042	0.35	+0.1
5,984,354	-		Psyr_5042	0.35	-0.7
5,984,354	-		Psyr_5042	0.35	-0.5
5,984,354	-		Psyr_5042	0.35	-0.2
5,984,354	-		Psyr_5042	0.35	+0.1
5,984,354	-		Psyr_5042	0.35	-0.4
5,984,354	-		Psyr_5042	0.35	+0.2
5,984,354	-		Psyr_5042	0.35	-0.1
5,984,354	-		Psyr_5042	0.35	+0.3
5,984,551	+		Psyr_5042	0.51	+0.7
5,984,551	+		Psyr_5042	0.51	+0.6
5,984,552	-		Psyr_5042	0.51	-0.6
5,984,552	-		Psyr_5042	0.51	-0.1
5,984,552	-		Psyr_5042	0.51	-1.1
5,984,552	-		Psyr_5042	0.51	+0.1
5,984,552	-		Psyr_5042	0.51	+0.7
5,984,605	+		Psyr_5042	0.55	+1.5
5,984,605	+		Psyr_5042	0.55	-0.5
5,984,629	+		Psyr_5042	0.57	-0.1
5,984,629	+		Psyr_5042	0.57	+0.3
5,984,629	+		Psyr_5042	0.57	-0.3
5,984,629	+		Psyr_5042	0.57	+0.5
5,984,630	-		Psyr_5042	0.57	-0.7
5,984,630	-		Psyr_5042	0.57	+0.7
5,984,630	-		Psyr_5042	0.57	+0.7
5,984,630	-		Psyr_5042	0.57	+0.2
5,984,630	-		Psyr_5042	0.57	-0.1
5,984,630	-		Psyr_5042	0.57	-0.2
5,984,630	-		Psyr_5042	0.57	+0.4
5,984,630	-		Psyr_5042	0.57	-1.8
5,984,630	-		Psyr_5042	0.57	-0.4
5,984,630	-		Psyr_5042	0.57	-0.9
5,984,842	+		Psyr_5042	0.73	-2.7
5,984,842	+		Psyr_5042	0.73	+0.7
5,984,842	+		Psyr_5042	0.73	-1.2
5,984,842	+		Psyr_5042	0.73	+0.5
5,984,842	+		Psyr_5042	0.73	+0.1
5,984,843	-		Psyr_5042	0.73	+0.5
5,984,843	-		Psyr_5042	0.73	-0.3
5,984,843	-		Psyr_5042	0.73	-1.0
5,984,843	-		Psyr_5042	0.73	-0.0
5,984,843	-		Psyr_5042	0.73	-0.4
5,984,843	-		Psyr_5042	0.73	+0.6
5,985,085	+				+2.0
5,985,131	-				-1.2
5,985,204	+				+1.4
5,985,205	-				+0.9
5,985,205	-				+0.1
5,985,205	-				-0.3
5,985,205	-				-0.6
5,985,205	-				-0.8
5,985,205	-				-1.0
5,985,205	-				-0.2
5,985,293	+				+0.4
5,985,312	+				+0.2
5,985,312	+				-1.4
5,985,313	-				-0.3
5,985,333	+				+1.4
5,985,333	+				+0.4
5,985,334	-				+3.4
5,985,334	-				+0.9
5,985,334	-				-0.2
5,985,417	+				+0.9
5,985,417	+				+3.4
5,985,417	+				-0.9
5,985,417	+				-0.9
5,985,418	-				-1.0
5,985,418	-				-1.1
5,985,436	+				-0.2
5,985,436	+				+0.6
5,985,436	+				-0.3
5,985,437	-				-1.7
5,985,535	+				-0.1
5,985,535	+				-1.1
5,985,535	+				-0.2
5,985,535	+				-1.1
5,985,535	+				+0.3
5,985,535	+				+0.0
5,985,535	+				-0.6
5,985,535	+				-0.0
5,985,535	+				-0.9
5,985,535	+				-0.8
5,985,535	+				+2.0
5,985,535	+				+0.2
5,985,535	+				+0.3
5,985,535	+				-1.5
5,985,535	+				+0.7
5,985,536	-				+0.5
5,985,536	-				-1.6
5,985,536	-				-0.3
5,985,536	-				-1.4
5,985,536	-				+0.5
5,985,536	-				+1.1
5,985,536	-				+0.9
5,985,536	-				-0.3
5,985,536	-				+1.0
5,985,536	-				-0.3
5,985,536	-				+0.3
5,985,536	-				-0.6
5,985,536	-				+0.1
5,985,536	-				-0.6
5,985,536	-				-0.2
5,985,536	-				+0.0
5,985,536	-				+0.4
5,985,536	-				+1.0
5,985,536	-				+0.6
5,985,536	-				-0.3
5,985,581	+				+3.3
5,985,581	+				+0.8
5,985,581	+				+0.5
5,985,581	+				+0.1
5,985,581	+				-0.9
5,985,581	+				+0.6
5,985,581	+				+1.4
5,985,581	+				-0.3
5,985,581	+				-0.1
5,985,581	+				-1.0
5,985,581	+				+0.1
5,985,581	+				+0.1
5,985,581	+				+0.6
5,985,581	+				+0.6
5,985,581	+				-2.3
5,985,581	+				+1.0
5,985,581	+				-0.5
5,985,582	-				+0.0
5,985,582	-				+0.0
5,985,582	-				-0.4
5,985,582	-				-0.8
5,985,582	-				-0.6
5,985,582	-				+0.3
5,985,582	-				-0.6
5,985,582	-				-0.9
5,985,582	-				+0.3
5,985,582	-				-0.7
5,985,582	-				+0.4
5,985,587	-				-1.2
5,985,614	+				-0.6
5,985,614	+				-0.4
5,985,615	-				-0.3
5,985,615	-				-2.3
5,985,615	-				-1.1
5,985,856	+		Psyr_5043	0.59	-1.7
5,985,856	+		Psyr_5043	0.59	-0.5
5,985,856	+		Psyr_5043	0.59	+0.6
5,985,977	+		Psyr_5043	0.89	+1.1
5,985,977	+		Psyr_5043	0.89	-1.0
5,985,977	+		Psyr_5043	0.89	-0.1
5,985,977	+		Psyr_5043	0.89	-1.9
5,985,977	+		Psyr_5043	0.89	-0.5
5,985,978	-		Psyr_5043	0.89	-0.9
5,985,978	-		Psyr_5043	0.89	-0.2
5,985,978	-		Psyr_5043	0.89	-0.9
5,985,978	-		Psyr_5043	0.89	+0.2
5,985,978	-		Psyr_5043	0.89	+0.9
5,985,978	-		Psyr_5043	0.89	-2.9
5,985,978	-		Psyr_5043	0.89	-2.6
5,985,978	-		Psyr_5043	0.89	+0.4
5,985,978	-		Psyr_5043	0.89	-0.8
5,985,978	-		Psyr_5043	0.89	+0.3
5,986,018	+				+0.3
5,986,018	+				+0.1
5,986,019	-				+1.4
5,986,078	+				-0.3
5,986,078	+				-0.6
5,986,079	-				-0.3
5,986,079	-				-1.2
5,986,177	+				+2.5
5,986,177	+				-1.0
5,986,177	+				-0.3
5,986,178	-				-0.4
5,986,178	-				+1.2
5,986,178	-				+1.0
5,986,178	-				-1.2