Experiment: DMSO
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4415 and Psyr_4416 overlap by 4 nucleotides Psyr_4416 and Psyr_4417 overlap by 8 nucleotides Psyr_4417 and Psyr_4418 are separated by 135 nucleotides
Psyr_4415: Psyr_4415 - cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase, at 5,279,267 to 5,280,001
_4415
Psyr_4416: Psyr_4416 - precorrin-8X methylmutase, at 5,279,998 to 5,280,624
_4416
Psyr_4417: Psyr_4417 - Ferredoxin--nitrite reductase, at 5,280,617 to 5,281,960
_4417
Psyr_4418: Psyr_4418 - Precorrin-6Y C5,15-methyltransferase (decarboxylating), at 5,282,096 to 5,283,298
_4418
Position (kb) 5280
5281
5282 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5279.617 kb on - strand, within Psyr_4415 at 5279.617 kb on - strand, within Psyr_4415 at 5279.617 kb on - strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.659 kb on - strand, within Psyr_4415 at 5279.743 kb on - strand, within Psyr_4415 at 5279.743 kb on - strand, within Psyr_4415 at 5279.743 kb on - strand, within Psyr_4415 at 5279.875 kb on + strand, within Psyr_4415 at 5279.892 kb on + strand, within Psyr_4415 at 5279.892 kb on + strand, within Psyr_4415 at 5279.892 kb on + strand, within Psyr_4415 at 5279.893 kb on - strand, within Psyr_4415 at 5279.893 kb on - strand, within Psyr_4415 at 5279.893 kb on - strand, within Psyr_4415 at 5280.200 kb on + strand, within Psyr_4416 at 5280.200 kb on + strand, within Psyr_4416 at 5280.201 kb on - strand, within Psyr_4416 at 5280.201 kb on - strand, within Psyr_4416 at 5280.235 kb on + strand, within Psyr_4416 at 5280.235 kb on + strand, within Psyr_4416 at 5280.236 kb on - strand, within Psyr_4416 at 5280.236 kb on - strand, within Psyr_4416 at 5280.289 kb on - strand, within Psyr_4416 at 5280.590 kb on + strand at 5280.590 kb on + strand at 5280.590 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.614 kb on + strand at 5280.614 kb on + strand at 5280.614 kb on + strand at 5280.615 kb on - strand at 5280.615 kb on - strand at 5280.673 kb on + strand at 5280.674 kb on - strand at 5280.674 kb on - strand at 5280.674 kb on - strand at 5280.674 kb on - strand at 5280.676 kb on + strand at 5280.676 kb on + strand at 5280.677 kb on - strand at 5280.677 kb on - strand at 5280.677 kb on - strand at 5280.730 kb on - strand at 5280.777 kb on - strand, within Psyr_4417 at 5280.820 kb on + strand, within Psyr_4417 at 5281.788 kb on + strand, within Psyr_4417 at 5281.789 kb on - strand, within Psyr_4417 at 5282.001 kb on + strand at 5282.001 kb on + strand at 5282.002 kb on - strand at 5282.012 kb on + strand at 5282.013 kb on - strand at 5282.032 kb on + strand at 5282.032 kb on + strand at 5282.033 kb on - strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.090 kb on - strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.139 kb on - strand at 5282.408 kb on + strand, within Psyr_4418 at 5282.408 kb on + strand, within Psyr_4418 at 5282.409 kb on - strand, within Psyr_4418 at 5282.409 kb on - strand, within Psyr_4418 at 5282.803 kb on - strand, within Psyr_4418
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO remove 5,279,617 - Psyr_4415 0.48 -0.2 5,279,617 - Psyr_4415 0.48 -0.9 5,279,617 - Psyr_4415 0.48 -0.2 5,279,643 + Psyr_4415 0.51 -0.6 5,279,643 + Psyr_4415 0.51 -0.9 5,279,643 + Psyr_4415 0.51 +1.4 5,279,643 + Psyr_4415 0.51 -0.4 5,279,643 + Psyr_4415 0.51 -1.1 5,279,643 + Psyr_4415 0.51 +0.4 5,279,643 + Psyr_4415 0.51 -1.6 5,279,643 + Psyr_4415 0.51 +1.4 5,279,644 - Psyr_4415 0.51 -0.0 5,279,644 - Psyr_4415 0.51 +0.4 5,279,644 - Psyr_4415 0.51 -0.9 5,279,644 - Psyr_4415 0.51 +2.0 5,279,649 + Psyr_4415 0.52 +0.9 5,279,649 + Psyr_4415 0.52 +0.8 5,279,649 + Psyr_4415 0.52 -0.2 5,279,649 + Psyr_4415 0.52 +0.1 5,279,649 + Psyr_4415 0.52 -0.2 5,279,649 + Psyr_4415 0.52 -1.6 5,279,649 + Psyr_4415 0.52 +0.4 5,279,650 - Psyr_4415 0.52 -1.1 5,279,650 - Psyr_4415 0.52 +0.8 5,279,650 - Psyr_4415 0.52 -2.8 5,279,650 - Psyr_4415 0.52 -1.8 5,279,650 - Psyr_4415 0.52 -0.2 5,279,650 - Psyr_4415 0.52 +1.4 5,279,650 - Psyr_4415 0.52 +0.4 5,279,650 - Psyr_4415 0.52 -1.6 5,279,650 - Psyr_4415 0.52 +1.4 5,279,650 - Psyr_4415 0.52 -1.2 5,279,650 - Psyr_4415 0.52 +1.4 5,279,659 - Psyr_4415 0.53 +0.7 5,279,743 - Psyr_4415 0.65 -0.2 5,279,743 - Psyr_4415 0.65 +0.4 5,279,743 - Psyr_4415 0.65 +0.4 5,279,875 + Psyr_4415 0.83 +1.4 5,279,892 + Psyr_4415 0.85 -0.2 5,279,892 + Psyr_4415 0.85 -0.2 5,279,892 + Psyr_4415 0.85 +0.4 5,279,893 - Psyr_4415 0.85 +2.0 5,279,893 - Psyr_4415 0.85 +1.1 5,279,893 - Psyr_4415 0.85 -0.6 5,280,200 + Psyr_4416 0.32 -2.3 5,280,200 + Psyr_4416 0.32 +0.1 5,280,201 - Psyr_4416 0.32 +0.2 5,280,201 - Psyr_4416 0.32 -1.6 5,280,235 + Psyr_4416 0.38 +2.4 5,280,235 + Psyr_4416 0.38 -0.2 5,280,236 - Psyr_4416 0.38 +1.4 5,280,236 - Psyr_4416 0.38 -0.2 5,280,289 - Psyr_4416 0.46 -1.2 5,280,590 + -0.2 5,280,590 + +0.4 5,280,590 + +1.4 5,280,592 + -0.9 5,280,592 + +1.4 5,280,592 + -1.6 5,280,593 - -1.2 5,280,593 - +0.4 5,280,593 - +0.4 5,280,593 - +0.4 5,280,593 - +3.4 5,280,614 + -0.6 5,280,614 + -0.2 5,280,614 + +0.3 5,280,615 - +0.4 5,280,615 - +1.9 5,280,673 + +0.4 5,280,674 - +1.4 5,280,674 - -1.3 5,280,674 - -0.6 5,280,674 - +0.9 5,280,676 + +0.9 5,280,676 + +1.4 5,280,677 - -0.2 5,280,677 - -1.2 5,280,677 - +1.4 5,280,730 - -0.9 5,280,777 - Psyr_4417 0.12 -1.6 5,280,820 + Psyr_4417 0.15 +0.4 5,281,788 + Psyr_4417 0.87 -0.6 5,281,789 - Psyr_4417 0.87 +2.0 5,282,001 + +1.2 5,282,001 + -0.3 5,282,002 - +1.8 5,282,012 + -0.4 5,282,013 - -0.1 5,282,032 + -0.4 5,282,032 + +0.3 5,282,033 - +1.6 5,282,089 + +0.0 5,282,089 + -0.7 5,282,089 + +0.2 5,282,089 + -0.7 5,282,089 + +0.4 5,282,089 + +0.0 5,282,090 - +0.8 5,282,093 + +1.1 5,282,093 + +0.8 5,282,093 + -0.2 5,282,093 + -2.3 5,282,093 + +0.4 5,282,093 + +1.1 5,282,093 + +0.2 5,282,093 + +1.1 5,282,093 + +1.6 5,282,093 + -1.5 5,282,093 + +1.1 5,282,093 + -2.2 5,282,093 + +0.2 5,282,093 + -0.4 5,282,093 + +0.3 5,282,093 + +0.5 5,282,093 + -0.7 5,282,093 + -1.4 5,282,093 + +0.9 5,282,093 + -0.2 5,282,093 + -1.2 5,282,093 + +1.0 5,282,094 - -1.8 5,282,094 - -0.6 5,282,094 - -0.5 5,282,094 - +0.7 5,282,094 - -0.9 5,282,094 - -0.2 5,282,094 - +0.6 5,282,094 - +2.2 5,282,094 - -0.6 5,282,094 - -1.3 5,282,094 - +0.4 5,282,094 - -0.2 5,282,094 - -0.8 5,282,094 - +1.4 5,282,094 - -0.6 5,282,139 - +0.2 5,282,408 + Psyr_4418 0.26 +0.4 5,282,408 + Psyr_4418 0.26 +0.4 5,282,409 - Psyr_4418 0.26 +0.4 5,282,409 - Psyr_4418 0.26 -0.6 5,282,803 - Psyr_4418 0.59 +0.3
Or see this region's nucleotide sequence