Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1543

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
1,735,980	+		Psyr_1542	0.14	-0.6
1,735,981	-		Psyr_1542	0.14	-2.7
1,735,983	+		Psyr_1542	0.14	+1.0
1,735,983	+		Psyr_1542	0.14	+0.5
1,735,983	+		Psyr_1542	0.14	+0.6
1,735,983	+		Psyr_1542	0.14	-0.6
1,735,983	+		Psyr_1542	0.14	-0.5
1,735,983	+		Psyr_1542	0.14	-0.3
1,735,984	-		Psyr_1542	0.14	+0.9
1,735,984	-		Psyr_1542	0.14	+0.9
1,735,984	-		Psyr_1542	0.14	+0.4
1,735,984	-		Psyr_1542	0.14	+0.7
1,736,086	+		Psyr_1542	0.24	+0.5
1,736,087	-		Psyr_1542	0.24	-0.8
1,736,087	-		Psyr_1542	0.24	-0.3
1,736,087	-		Psyr_1542	0.24	-0.3
1,736,087	-		Psyr_1542	0.24	-0.9
1,736,087	-		Psyr_1542	0.24	+0.4
1,736,240	+		Psyr_1542	0.38	+0.4
1,736,241	-		Psyr_1542	0.38	+0.5
1,736,253	+		Psyr_1542	0.39	+0.7
1,736,253	+		Psyr_1542	0.39	-0.3
1,736,253	+		Psyr_1542	0.39	-0.7
1,736,254	-		Psyr_1542	0.39	-0.7
1,736,254	-		Psyr_1542	0.39	-1.1
1,736,254	-		Psyr_1542	0.39	-0.2
1,736,254	-		Psyr_1542	0.39	-0.2
1,736,254	-		Psyr_1542	0.39	-1.0
1,736,254	-		Psyr_1542	0.39	-1.0
1,736,388	+		Psyr_1542	0.52	-1.3
1,736,389	-		Psyr_1542	0.52	+0.1
1,736,389	-		Psyr_1542	0.52	+0.1
1,736,389	-		Psyr_1542	0.52	-0.3
1,736,640	+		Psyr_1542	0.76	-0.7
1,736,641	-		Psyr_1542	0.76	+0.3
1,736,641	-		Psyr_1542	0.76	-0.0
1,736,747	+		Psyr_1542	0.86	+0.6
1,736,748	-		Psyr_1542	0.86	+0.4
1,736,748	-		Psyr_1542	0.86	-1.0
1,736,827	+				-0.7
1,736,827	+				-0.0
1,736,828	-				+0.0
1,736,943	+				+1.1
1,736,943	+				+0.8
1,736,943	+				-0.3
1,736,943	+				-0.7
1,736,943	+				+0.3
1,736,943	+				+0.7
1,736,943	+				-0.6
1,736,943	+				-0.2
1,736,943	+				+0.4
1,736,944	-				-1.2
1,736,944	-				+0.5
1,736,944	-				-1.4
1,736,944	-				+0.5
1,737,129	+		Psyr_1543	0.11	-1.1
1,737,130	-		Psyr_1543	0.11	-0.9
1,737,195	+		Psyr_1543	0.15	+0.4
1,737,310	-		Psyr_1543	0.23	-0.3
1,737,405	+		Psyr_1543	0.30	-2.2
1,737,405	+		Psyr_1543	0.30	-1.4
1,737,405	+		Psyr_1543	0.30	-0.2
1,737,405	+		Psyr_1543	0.30	-0.6
1,737,405	+		Psyr_1543	0.30	-0.4
1,737,405	+		Psyr_1543	0.30	-0.5
1,737,406	-		Psyr_1543	0.30	+0.5
1,737,406	-		Psyr_1543	0.30	-1.1
1,737,406	-		Psyr_1543	0.30	+0.9
1,737,406	-		Psyr_1543	0.30	-1.7
1,737,406	-		Psyr_1543	0.30	-0.3
1,737,406	-		Psyr_1543	0.30	+0.5
1,737,406	-		Psyr_1543	0.30	-1.0
1,737,406	-		Psyr_1543	0.30	+1.0
1,737,406	-		Psyr_1543	0.30	+0.4
1,737,406	-		Psyr_1543	0.30	-0.6
1,737,409	+		Psyr_1543	0.30	+0.6
1,737,409	+		Psyr_1543	0.30	+0.3
1,737,409	+		Psyr_1543	0.30	-1.0
1,737,410	-		Psyr_1543	0.30	-0.5
1,737,410	-		Psyr_1543	0.30	-1.4
1,737,410	-		Psyr_1543	0.30	-0.8
1,737,579	+		Psyr_1543	0.42	-0.4
1,737,580	-		Psyr_1543	0.42	-1.0
1,737,580	-		Psyr_1543	0.42	-2.4
1,737,580	-		Psyr_1543	0.42	-1.4
1,737,613	-		Psyr_1543	0.44	-1.2
1,737,613	-		Psyr_1543	0.44	-0.2
1,737,613	-		Psyr_1543	0.44	+0.4
1,738,212	+		Psyr_1543	0.86	-0.4
1,738,212	+		Psyr_1543	0.86	-0.0
1,738,213	-		Psyr_1543	0.86	-3.0
1,738,213	-		Psyr_1543	0.86	-3.0
1,738,436	+				-2.0
1,738,436	+				-0.6
1,738,437	-				-0.4
1,738,437	-				-0.5
1,738,441	+				-2.0
1,738,441	+				+0.7
1,738,441	+				-0.7
1,738,441	+				-0.4
1,738,441	+				-0.3
1,738,441	+				+0.3
1,738,442	-				-0.2
1,738,475	+				+1.0
1,738,475	+				-1.4
1,738,475	+				-0.2
1,738,475	+				+0.1
1,738,475	+				+0.2
1,738,476	-				-1.0
1,738,476	-				+0.1
1,738,476	-				-2.0
1,738,544	-				-1.8
1,738,563	-				+0.4
1,738,563	-				-0.1
1,738,679	+		Psyr_1544	0.52	+0.4
1,738,679	+		Psyr_1544	0.52	-1.8
1,738,679	+		Psyr_1544	0.52	+0.3
1,738,679	+		Psyr_1544	0.52	+0.1
1,738,679	+		Psyr_1544	0.52	+0.2
1,738,679	+		Psyr_1544	0.52	+0.4
1,738,679	+		Psyr_1544	0.52	+0.3
1,738,679	+		Psyr_1544	0.52	-0.2
1,738,680	-		Psyr_1544	0.52	-0.4
1,738,680	-		Psyr_1544	0.52	-1.1
1,738,680	-		Psyr_1544	0.52	-0.1
1,738,774	+		Psyr_1544	0.89	-1.1
1,738,774	+		Psyr_1544	0.89	-0.9
1,738,774	+		Psyr_1544	0.89	-1.6
1,738,775	-				-0.9
1,738,775	-				-1.3
1,738,868	+				+1.1
1,738,868	+				-0.5
1,738,868	+				-0.1
1,738,868	+				-0.2
1,738,869	-				+0.3
1,738,869	-				+0.4
1,738,869	-				-0.3
1,738,869	-				-0.2
1,739,073	+		Psyr_1545	0.22	-0.1
1,739,074	-		Psyr_1545	0.22	-0.2
1,739,074	-		Psyr_1545	0.22	+0.7
1,739,121	+		Psyr_1545	0.27	+0.3
1,739,150	-		Psyr_1545	0.29	-0.5
1,739,178	+		Psyr_1545	0.32	-0.6
1,739,178	+		Psyr_1545	0.32	-1.6
1,739,178	+		Psyr_1545	0.32	-0.9
1,739,179	-		Psyr_1545	0.32	+0.1
1,739,179	-		Psyr_1545	0.32	+0.2
1,739,327	+		Psyr_1545	0.46	-0.4
1,739,327	+		Psyr_1545	0.46	-1.9
1,739,327	+		Psyr_1545	0.46	-1.0
1,739,327	+		Psyr_1545	0.46	+0.9
1,739,327	+		Psyr_1545	0.46	-0.0
1,739,327	+		Psyr_1545	0.46	-1.4
1,739,327	+		Psyr_1545	0.46	-0.9
1,739,327	+		Psyr_1545	0.46	+0.3
1,739,328	-		Psyr_1545	0.46	+0.6
1,739,328	-		Psyr_1545	0.46	-0.8
1,739,328	-		Psyr_1545	0.46	+0.5
1,739,328	-		Psyr_1545	0.46	+0.4
1,739,328	-				-1.1
1,739,328	-		Psyr_1545	0.46	+0.4
1,739,328	-		Psyr_1545	0.46	-1.4
1,739,328	-		Psyr_1545	0.46	-0.0
1,739,328	-		Psyr_1545	0.46	-2.0
1,739,328	-		Psyr_1545	0.46	-0.4
1,739,328	-		Psyr_1545	0.46	-1.0
1,739,403	-		Psyr_1545	0.53	-0.6
1,739,403	-		Psyr_1545	0.53	-0.3
1,739,403	-		Psyr_1545	0.53	-0.5