Experiment: DMSO
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0321 and Psyr_0322 overlap by 4 nucleotides Psyr_0322 and Psyr_0323 are separated by 51 nucleotides
Psyr_0321: Psyr_0321 - aminopeptidase P, Metallo peptidase, MEROPS family M24B, at 337,506 to 338,840
_0321
Psyr_0322: Psyr_0322 - 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 338,837 to 340,024
_0322
Psyr_0323: Psyr_0323 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase, at 340,076 to 341,305
_0323
Position (kb) 338
339
340
341 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 337.887 kb on + strand, within Psyr_0321 at 337.887 kb on + strand, within Psyr_0321 at 338.028 kb on + strand, within Psyr_0321 at 338.028 kb on + strand, within Psyr_0321 at 338.028 kb on + strand, within Psyr_0321 at 338.028 kb on + strand, within Psyr_0321 at 338.072 kb on + strand, within Psyr_0321 at 338.190 kb on + strand, within Psyr_0321 at 338.307 kb on + strand, within Psyr_0321 at 338.308 kb on - strand, within Psyr_0321 at 338.308 kb on - strand, within Psyr_0321 at 338.373 kb on + strand, within Psyr_0321 at 338.373 kb on + strand, within Psyr_0321 at 338.373 kb on + strand, within Psyr_0321 at 338.373 kb on + strand, within Psyr_0321 at 338.373 kb on + strand, within Psyr_0321 at 338.374 kb on - strand, within Psyr_0321 at 338.374 kb on - strand, within Psyr_0321 at 338.535 kb on + strand, within Psyr_0321 at 338.535 kb on + strand, within Psyr_0321 at 338.535 kb on + strand, within Psyr_0321 at 338.535 kb on + strand, within Psyr_0321 at 338.535 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.547 kb on + strand, within Psyr_0321 at 338.548 kb on - strand, within Psyr_0321 at 338.601 kb on + strand, within Psyr_0321 at 338.601 kb on + strand, within Psyr_0321 at 338.601 kb on + strand, within Psyr_0321 at 338.601 kb on + strand, within Psyr_0321 at 338.602 kb on - strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.667 kb on + strand, within Psyr_0321 at 338.668 kb on - strand, within Psyr_0321 at 338.668 kb on - strand, within Psyr_0321 at 338.668 kb on - strand, within Psyr_0321 at 338.668 kb on - strand, within Psyr_0321 at 338.711 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO remove 337,887 + Psyr_0321 0.29 -0.7 337,887 + Psyr_0321 0.29 +0.3 338,028 + Psyr_0321 0.39 +0.8 338,028 + Psyr_0321 0.39 -0.0 338,028 + Psyr_0321 0.39 +0.3 338,028 + Psyr_0321 0.39 +0.0 338,072 + Psyr_0321 0.42 -1.2 338,190 + Psyr_0321 0.51 +0.1 338,307 + Psyr_0321 0.60 -0.2 338,308 - Psyr_0321 0.60 +0.6 338,308 - Psyr_0321 0.60 +0.6 338,373 + Psyr_0321 0.65 +1.6 338,373 + Psyr_0321 0.65 +0.6 338,373 + Psyr_0321 0.65 -0.6 338,373 + Psyr_0321 0.65 +0.6 338,373 + Psyr_0321 0.65 +1.4 338,374 - Psyr_0321 0.65 -1.0 338,374 - Psyr_0321 0.65 -0.6 338,535 + Psyr_0321 0.77 -0.1 338,535 + Psyr_0321 0.77 -0.5 338,535 + Psyr_0321 0.77 -0.8 338,535 + Psyr_0321 0.77 +0.4 338,535 + Psyr_0321 0.77 +1.2 338,547 + Psyr_0321 0.78 +0.8 338,547 + Psyr_0321 0.78 -0.5 338,547 + Psyr_0321 0.78 +0.5 338,547 + Psyr_0321 0.78 +0.6 338,547 + Psyr_0321 0.78 +1.0 338,547 + Psyr_0321 0.78 -1.0 338,547 + Psyr_0321 0.78 -0.7 338,547 + Psyr_0321 0.78 -0.6 338,547 + Psyr_0321 0.78 -0.4 338,548 - Psyr_0321 0.78 +0.4 338,601 + Psyr_0321 0.82 +0.8 338,601 + Psyr_0321 0.82 +1.4 338,601 + Psyr_0321 0.82 +1.0 338,601 + Psyr_0321 0.82 -0.9 338,602 - Psyr_0321 0.82 +3.1 338,667 + Psyr_0321 0.87 -0.4 338,667 + Psyr_0321 0.87 -1.7 338,667 + Psyr_0321 0.87 -1.1 338,667 + Psyr_0321 0.87 +0.5 338,667 + Psyr_0321 0.87 +0.1 338,667 + Psyr_0321 0.87 +0.6 338,667 + Psyr_0321 0.87 +0.8 338,667 + Psyr_0321 0.87 -0.8 338,667 + Psyr_0321 0.87 +0.4 338,667 + Psyr_0321 0.87 -0.0 338,667 + Psyr_0321 0.87 -0.1 338,667 + Psyr_0321 0.87 +0.8 338,668 - Psyr_0321 0.87 -0.2 338,668 - Psyr_0321 0.87 -0.6 338,668 - Psyr_0321 0.87 +1.4 338,668 - Psyr_0321 0.87 -2.1 338,711 + +0.3
Or see this region's nucleotide sequence