Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4381

Experiment: DMSO

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DMSO
5,235,758	+		Psyr_4379	0.38	-0.5
5,235,758	+		Psyr_4379	0.38	+0.5
5,235,759	-		Psyr_4379	0.38	-1.1
5,235,759	-		Psyr_4379	0.38	-0.2
5,235,777	+		Psyr_4379	0.41	+0.4
5,235,812	+		Psyr_4379	0.48	+0.1
5,235,812	+		Psyr_4379	0.48	+2.5
5,235,813	-		Psyr_4379	0.48	+0.0
5,235,940	-		Psyr_4379	0.71	+1.5
5,236,027	+		Psyr_4379	0.87	+0.2
5,236,027	+		Psyr_4379	0.87	-0.9
5,236,027	+		Psyr_4379	0.87	-1.0
5,236,028	-		Psyr_4379	0.87	+1.8
5,236,028	-		Psyr_4379	0.87	+0.5
5,236,028	-		Psyr_4379	0.87	-0.7
5,236,068	-				+0.2
5,236,072	+				-0.4
5,236,073	-				+0.7
5,236,080	+				-0.2
5,236,081	-				-0.8
5,236,241	+				+0.3
5,236,328	+		Psyr_4380	0.12	-1.1
5,236,328	+		Psyr_4380	0.12	+1.2
5,236,329	-		Psyr_4380	0.12	+1.7
5,236,434	-		Psyr_4380	0.40	+0.7
5,236,434	-		Psyr_4380	0.40	-0.6
5,236,434	-		Psyr_4380	0.40	+2.1
5,236,639	-				+1.7
5,236,688	+				-1.5
5,236,688	+				-0.3
5,236,688	+				+0.5
5,236,689	-				+1.0
5,236,689	-				+0.6
5,236,689	-				+0.5
5,236,689	-				+2.1
5,236,727	+				-0.2
5,236,727	+				+0.9
5,236,727	+				+0.0
5,236,728	-				-0.1
5,236,728	-				+0.0
5,236,728	-				+0.2
5,236,728	-				+1.0
5,236,728	-				+1.0
5,236,728	-				+0.1
5,236,728	-				-1.6
5,236,731	+				+0.5
5,236,731	+				+1.1
5,236,731	+				-1.2
5,236,731	+				+0.1
5,236,731	+				-0.4
5,236,731	+				+0.6
5,236,731	+				+0.6
5,236,732	-				-0.3
5,236,732	-				+0.6
5,236,732	-				+0.3
5,236,765	+				-0.4
5,236,765	+				-0.1
5,236,765	+				+1.4
5,236,765	+				+0.8
5,236,765	+				+1.5
5,236,765	+				-0.3
5,236,766	-				+0.4
5,236,766	-				+0.6
5,236,839	-				-0.1
5,236,846	+				+1.3
5,236,910	+				+0.8
5,236,911	-				+0.3
5,237,051	+		Psyr_4381	0.16	+1.3
5,237,051	+		Psyr_4381	0.16	-0.9
5,237,051	+		Psyr_4381	0.16	+0.7
5,237,052	-		Psyr_4381	0.16	-0.0
5,237,052	-		Psyr_4381	0.16	-0.1
5,237,213	+		Psyr_4381	0.24	-0.2
5,237,361	+		Psyr_4381	0.32	+0.7
5,237,570	+		Psyr_4381	0.43	-0.3
5,237,573	+		Psyr_4381	0.43	-0.3
5,237,609	+		Psyr_4381	0.45	+1.5
5,237,609	+		Psyr_4381	0.45	+2.0
5,237,609	+		Psyr_4381	0.45	+0.4
5,237,609	+		Psyr_4381	0.45	+1.5
5,237,609	+		Psyr_4381	0.45	+2.8
5,237,609	+		Psyr_4381	0.45	+1.1
5,237,609	+		Psyr_4381	0.45	-0.5
5,237,609	+		Psyr_4381	0.45	-0.1
5,237,610	-		Psyr_4381	0.45	+1.0
5,237,610	-		Psyr_4381	0.45	+1.9
5,237,610	-		Psyr_4381	0.45	+0.8
5,237,610	-		Psyr_4381	0.45	+0.5
5,237,610	-		Psyr_4381	0.45	+1.5
5,237,610	-		Psyr_4381	0.45	+0.4
5,237,610	-		Psyr_4381	0.45	-0.9
5,237,681	+		Psyr_4381	0.49	+0.0
5,237,682	-		Psyr_4381	0.49	-0.0
5,237,696	+		Psyr_4381	0.50	+1.4
5,237,696	+		Psyr_4381	0.50	+1.2
5,237,696	+		Psyr_4381	0.50	-0.7
5,237,697	-		Psyr_4381	0.50	+1.1
5,237,697	-		Psyr_4381	0.50	+0.6
5,237,697	-		Psyr_4381	0.50	+0.9
5,237,761	+		Psyr_4381	0.53	+0.0
5,237,762	-		Psyr_4381	0.53	+0.8
5,237,762	-		Psyr_4381	0.53	+0.7
5,237,762	-		Psyr_4381	0.53	+1.5
5,237,762	-		Psyr_4381	0.53	-1.9
5,237,762	-		Psyr_4381	0.53	+0.7
5,237,945	+		Psyr_4381	0.63	+0.7
5,237,945	+		Psyr_4381	0.63	-0.6
5,237,945	+		Psyr_4381	0.63	+1.3
5,237,946	-		Psyr_4381	0.63	-0.5
5,237,963	+		Psyr_4381	0.64	+1.6
5,237,963	+		Psyr_4381	0.64	+1.1
5,237,963	+		Psyr_4381	0.64	+1.5
5,237,963	+		Psyr_4381	0.64	+2.0
5,237,963	+		Psyr_4381	0.64	+0.2
5,237,963	+		Psyr_4381	0.64	-0.2
5,237,963	+		Psyr_4381	0.64	-0.9
5,237,963	+		Psyr_4381	0.64	+0.8
5,237,964	-		Psyr_4381	0.64	-0.7
5,237,964	-		Psyr_4381	0.64	+1.0
5,237,964	-		Psyr_4381	0.64	+1.5
5,237,964	-		Psyr_4381	0.64	+1.2
5,237,964	-		Psyr_4381	0.64	+2.1
5,237,964	-		Psyr_4381	0.64	+1.1
5,237,964	-		Psyr_4381	0.64	+1.2
5,237,964	-		Psyr_4381	0.64	+0.5
5,237,964	-		Psyr_4381	0.64	+0.4
5,237,964	-		Psyr_4381	0.64	+0.5
5,237,964	-		Psyr_4381	0.64	-0.6
5,237,964	-		Psyr_4381	0.64	-0.2
5,238,038	+		Psyr_4381	0.68	-0.5
5,238,038	+		Psyr_4381	0.68	+1.1
5,238,038	+		Psyr_4381	0.68	-0.2
5,238,038	+		Psyr_4381	0.68	-0.5
5,238,038	+		Psyr_4381	0.68	+0.2
5,238,039	-		Psyr_4381	0.68	+0.1
5,238,039	-		Psyr_4381	0.68	-1.3
5,238,039	-		Psyr_4381	0.68	+0.5
5,238,062	+		Psyr_4381	0.69	-0.1
5,238,062	+		Psyr_4381	0.69	+1.5
5,238,062	+		Psyr_4381	0.69	-0.1
5,238,063	-		Psyr_4381	0.69	+1.5
5,238,063	-		Psyr_4381	0.69	+0.7
5,238,137	+		Psyr_4381	0.73	+0.3
5,238,137	+		Psyr_4381	0.73	+0.9
5,238,137	+		Psyr_4381	0.73	-0.6
5,238,137	+		Psyr_4381	0.73	+2.5
5,238,137	+		Psyr_4381	0.73	+0.3
5,238,137	+		Psyr_4381	0.73	+0.7
5,238,137	+		Psyr_4381	0.73	+0.0
5,238,137	+		Psyr_4381	0.73	+0.8
5,238,137	+		Psyr_4381	0.73	+1.1
5,238,137	+		Psyr_4381	0.73	+0.5
5,238,137	+		Psyr_4381	0.73	+0.3
5,238,138	-		Psyr_4381	0.73	-1.3
5,238,138	-		Psyr_4381	0.73	+0.8
5,238,138	-		Psyr_4381	0.73	+0.4
5,238,138	-		Psyr_4381	0.73	+0.6
5,238,138	-		Psyr_4381	0.73	+1.0
5,238,138	-		Psyr_4381	0.73	+0.4
5,238,138	-		Psyr_4381	0.73	+0.5
5,238,138	-		Psyr_4381	0.73	-0.5
5,238,138	-		Psyr_4381	0.73	+0.3
5,238,138	-		Psyr_4381	0.73	+0.5
5,238,138	-		Psyr_4381	0.73	-0.9
5,238,138	-		Psyr_4381	0.73	+0.7
5,238,293	+		Psyr_4381	0.81	+1.1
5,238,294	-		Psyr_4381	0.81	+1.3
5,238,294	-		Psyr_4381	0.81	+0.2
5,238,294	-		Psyr_4381	0.81	+0.3
5,238,294	-		Psyr_4381	0.81	+0.3
5,238,294	-		Psyr_4381	0.81	+1.2
5,238,356	+		Psyr_4381	0.84	+0.4
5,238,356	+		Psyr_4381	0.84	+1.3
5,238,357	-		Psyr_4381	0.84	+0.5
5,238,446	+		Psyr_4381	0.89	+0.2
5,238,447	-		Psyr_4381	0.89	+0.5
5,238,447	-		Psyr_4381	0.89	+0.4
5,238,447	-		Psyr_4381	0.89	-1.9
5,238,519	-				-0.1
5,238,519	-				+1.0
5,238,602	+				+0.5
5,238,602	+				-0.0
5,238,602	+				+0.0
5,238,602	+				+0.6
5,238,602	+				+0.4
5,238,603	-				+0.1
5,238,603	-				+1.4
5,238,603	-				+0.6
5,238,603	-				+0.7
5,238,644	+				+2.1
5,238,679	+				+0.3
5,238,679	+				+0.7
5,238,679	+				+0.8
5,238,680	-				+0.7
5,238,680	-				+0.7
5,238,680	-				+0.5
5,238,680	-				-0.2
5,238,783	+				+0.1
5,238,783	+				-0.8
5,238,784	-				+0.8
5,238,784	-				+0.1
5,238,801	+				+0.3
5,238,801	+				+0.1
5,238,801	+				+1.8
5,238,801	+				-0.7
5,238,801	+				+0.2
5,238,801	+				+0.2
5,238,802	-				-0.3
5,238,802	-				+0.7
5,238,802	-				+0.4
5,238,802	-				-1.2
5,238,825	-				+0.0
5,238,841	+				-0.8
5,238,841	+				+0.9
5,238,841	+				-0.2
5,238,841	+				-0.1
5,238,841	+				+0.0
5,238,842	-				-0.2
5,238,842	-				-1.3
5,238,842	-				-0.7
5,238,842	-				+0.7
5,239,079	+		Psyr_4382	0.15	-0.6
5,239,079	+		Psyr_4382	0.15	-1.4
5,239,079	+		Psyr_4382	0.15	+1.6
5,239,079	+		Psyr_4382	0.15	+0.1
5,239,079	+		Psyr_4382	0.15	-0.8
5,239,079	+		Psyr_4382	0.15	-0.7
5,239,079	+		Psyr_4382	0.15	-1.4
5,239,080	-		Psyr_4382	0.15	+1.0
5,239,080	-		Psyr_4382	0.15	-0.1
5,239,080	-		Psyr_4382	0.15	-0.1
5,239,190	+		Psyr_4382	0.25	+0.4
5,239,230	+		Psyr_4382	0.28	-2.0
5,239,246	+		Psyr_4382	0.30	-0.4
5,239,246	+		Psyr_4382	0.30	-0.6
5,239,246	+		Psyr_4382	0.30	-0.3
5,239,247	-		Psyr_4382	0.30	-0.0